Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_N15
         (508 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21310-5|AAY86191.1|  148|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U58739-3|AAB00610.1|  177|Caenorhabditis elegans Hypothetical pr...    27   5.9  

>U21310-5|AAY86191.1|  148|Caenorhabditis elegans Hypothetical
           protein F40H6.6 protein.
          Length = 148

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = -1

Query: 262 HIILFLL-DYVFYFPFYFRRLCFHHIKIY 179
           H+++ L+ D+ F+F FYF    F+ IKIY
Sbjct: 106 HVVIRLIFDFSFFFKFYF---IFYKIKIY 131


>U58739-3|AAB00610.1|  177|Caenorhabditis elegans Hypothetical
           protein F28C10.1 protein.
          Length = 177

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 353 YLSHVTVDNYKSESQTLYCQESVNKHGLYIPYYFVS 246
           +L H+ +   + E QT Y  ++ +++  YI YY +S
Sbjct: 127 FLDHMNLSISEFEDQTSYTSKTTSRNTKYIDYYKLS 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,285,609
Number of Sequences: 27780
Number of extensions: 151560
Number of successful extensions: 263
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)