BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_N13
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73... 43 2e-04
03_06_0187 + 32209924-32210634 43 2e-04
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 42 3e-04
07_03_1693 - 28756331-28756435,28756558-28756664,28757114-287572... 38 0.007
04_01_0377 - 4970034-4970687 37 0.012
09_02_0533 - 10325681-10326211,10326260-10326328,10326758-103268... 36 0.028
03_02_0917 + 12372122-12372422,12372487-12372524,12373103-123731... 35 0.064
08_02_0350 + 16123139-16124041 34 0.11
07_01_0313 + 2216498-2216953 33 0.15
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 33 0.26
10_08_0026 - 14253680-14253894,14253981-14254109,14254704-142547... 32 0.34
02_05_1156 - 34528204-34529411,34529982-34530122,34530214-34531072 31 0.60
10_06_0035 - 9896289-9896390,9897394-9897503,9897587-9897715,989... 31 0.79
07_01_0310 + 2209084-2209554 31 0.79
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 31 0.79
06_01_1013 - 7931756-7935109 31 0.79
07_01_0312 + 2214050-2214556 31 1.0
12_02_0849 - 23640091-23640279,23640537-23640677,23640756-236422... 30 1.4
12_02_0501 + 19742007-19742143,19742253-19742398,19742559-197425... 30 1.4
11_08_0003 + 27492503-27492812,27492863-27493148,27495399-274956... 30 1.4
09_06_0278 + 21991016-21992120,21992341-21992702,21992766-219934... 30 1.4
07_01_0945 - 7973736-7974275,7974446-7974580 30 1.4
04_01_0609 + 7966263-7966366,7967945-7968706,7972607-7972851,797... 30 1.4
03_04_0116 + 17406702-17409008,17409385-17409501,17409502-17409561 30 1.4
08_01_0842 - 8252232-8253155 30 1.8
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 30 1.8
04_03_0600 - 17856213-17856382,17856434-17857393,17857644-178578... 30 1.8
11_08_0005 + 27536091-27536761,27539697-27539890,27540097-275402... 29 2.4
11_08_0004 + 27518384-27519018,27519147-27519397,27520437-275205... 29 2.4
11_05_0065 + 18766566-18766576,18767023-18767083,18767170-187672... 29 2.4
09_04_0475 - 17913982-17914772,17914830-17915156,17915323-179154... 29 2.4
08_02_0421 - 16932354-16932427,16932909-16933076,16933443-16934544 29 2.4
07_03_0831 - 21810002-21810319,21810423-21810573,21810660-218108... 29 2.4
04_04_1120 + 31037811-31038813,31038903-31038991,31039094-310391... 29 2.4
04_03_0588 + 17595299-17596151,17597519-17597665,17598562-175988... 29 2.4
02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203 29 2.4
01_06_1588 + 38474698-38477169 29 2.4
11_06_0610 - 25449085-25453284 29 3.2
04_04_1211 + 31783076-31783680,31784162-31784427,31784546-31785378 29 3.2
03_06_0604 - 35006004-35008580 29 3.2
03_05_0524 - 25181432-25181483,25181565-25181691,25181776-251818... 29 3.2
12_02_0090 + 13493311-13494180 29 4.2
06_03_0773 - 24493772-24494252,24494377-24495758 29 4.2
03_02_0741 - 10857656-10857844,10858315-10858848,10859516-108598... 29 4.2
01_06_0347 + 28592552-28593502 29 4.2
12_02_1094 + 26032135-26032164,26032975-26033152,26033234-260340... 28 5.6
11_08_0023 + 27741775-27742475,27744163-27744413,27744557-277447... 28 5.6
11_08_0022 + 27733247-27733935,27735722-27735981,27736213-277364... 28 5.6
11_06_0326 - 22382001-22383248 28 5.6
08_02_0270 + 15108178-15108587,15108678-15108774,15109445-151094... 28 5.6
06_01_0743 - 5534743-5534985,5535075-5535172,5535286-5535429,553... 28 5.6
04_04_1420 + 33441260-33443704 28 5.6
04_03_0611 - 18011469-18012563,18012756-18012920,18013542-180136... 28 5.6
02_04_0317 + 21996324-21996681,21996833-21996859,21997299-219982... 28 5.6
12_01_0198 - 1461305-1463812 28 7.4
11_01_0192 - 1523572-1526097 28 7.4
08_02_0638 + 19603399-19604679 28 7.4
07_03_0832 - 21823518-21823826,21823920-21824070,21824148-218243... 28 7.4
07_01_0498 + 3734498-3734976,3736176-3736800 28 7.4
06_03_1133 - 27886823-27887088,27887837-27888629,27888674-27889000 28 7.4
06_01_0172 + 1362101-1363708 28 7.4
05_06_0098 + 25560158-25560925 28 7.4
04_04_1030 - 30249160-30250403,30250787-30251666 28 7.4
04_03_0819 + 20018496-20019487,20019587-20019721,20019834-200199... 28 7.4
04_03_0623 - 18109311-18109853,18109900-18110495,18111292-181114... 28 7.4
03_02_0404 - 8165211-8165318,8165397-8165733,8166031-8166242,816... 28 7.4
01_06_0948 - 33242219-33242530,33242632-33242782,33242874-332431... 28 7.4
12_02_1279 + 27510605-27513301 27 9.7
12_01_0367 - 2783507-2784490 27 9.7
11_05_0015 + 18403367-18403729,18404500-18404565,18405121-184052... 27 9.7
11_01_0196 - 1547373-1549859 27 9.7
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 27 9.7
05_07_0256 + 28713134-28713964 27 9.7
04_04_1375 + 33040329-33040854,33041611-33041838,33041984-330420... 27 9.7
04_03_0602 - 17884667-17885817,17885946-17886113,17886413-17887313 27 9.7
02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184 27 9.7
02_02_0188 + 7617838-7620231,7621856-7622071,7622167-7622328,762... 27 9.7
02_01_0016 + 110796-110979,111252-111768,111847-112213 27 9.7
01_06_0846 + 32408333-32408484,32408560-32408926,32409021-324093... 27 9.7
>11_01_0101 -
738305-738556,738723-738977,739306-739554,739649-739843,
739953-740060,740184-740405,740806-741390,741495-741863,
742423-742529,742755-742883,743027-743084,743166-743248,
744115-744196,744274-744350,744477-744560,744649-744718,
744796-744884,744965-745654,746127-746439
Length = 1338
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 6/113 (5%)
Frame = -2
Query: 525 VCSCPR----NMTGDPFTFCRPFEARDLCEPNPCGANAKCTPGHDRTGAERPVCTCPTGY 358
VC CP GD +T C CE N G G + C CP G+
Sbjct: 448 VCECPVVKGVKFVGDGYTHCEA-SGSGRCEINNGGCWKDSRHGRTYSACTNDGCKCPDGF 506
Query: 357 IGNALVSCERGECELDSQCSDHLACVGYQC-VDPCLGNTQCG-SGAVCMARRH 205
G+ + CE ++D +C + AC +C G+ +CG SG + + H
Sbjct: 507 KGDGVHKCE----DID-ECKERTACQCKECKCKNTWGSYECGCSGGLLYMKEH 554
>03_06_0187 + 32209924-32210634
Length = 236
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Frame = -3
Query: 524 SVPALET*PGIPSLFADPLRPVIYASPT-----RVEPT-PSAPQVTTAPVL--SVRSALV 369
++PA+ T PG+P++ P P I PT V PT P+ P + P + ++ +
Sbjct: 52 TIPAIPTIPGVPAV--GPTIPTIPTVPTIPGVPAVGPTIPAIPTIPGVPAVGPTIPTIPT 109
Query: 368 LPGTSETPLFPANVGSVNWILSAPITWPALVTSAWIPVSVTLNAVPAPFVWPGDILPS 195
+P P + + ++ I P P + T +P T+ VP V PG ++P+
Sbjct: 110 IPTIPGVPAVGSTIPTIPTIPGVPAVGPTIPTIPGVPTIPTVPGVPELPVNPGGVVPT 167
Score = 38.7 bits (86), Expect = 0.004
Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Frame = -3
Query: 524 SVPALET*PGIPSLFAD-PLRPVIYASPTRVEPT-------PSAPQVTTAPVLSVRSALV 369
++P + T PG+P++ + P P I P V PT P+ P V P L V V
Sbjct: 106 TIPTIPTIPGVPAVGSTIPTIPTIPGVPA-VGPTIPTIPGVPTIPTVPGVPELPVNPGGV 164
Query: 368 LPGTSETPLFPANVGSVNWILSAPITWPALVTSAWIPVSVTLNAVPAPFVWPGDILP 198
+P + PL P N G+V + + P + A V TL P P V PG LP
Sbjct: 165 VPTIPKVPLPPVNPGAV--VPAVPALPVPPIPGAAGGVVPTLPVPPLPAV-PGVPLP 218
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 6/113 (5%)
Frame = -2
Query: 525 VCSCPR----NMTGDPFTFCRPFEARDLCEPNPCGANAKCTPGHDRTGAERPVCTCPTGY 358
VC CP GD +T C CE N G G + C CP G+
Sbjct: 448 VCECPVVKGVKFVGDGYTHCEA-SGSGHCEINNGGCWKDSRHGRTYSACTNDGCKCPDGF 506
Query: 357 IGNALVSCERGECELDSQCSDHLACVGYQC-VDPCLGNTQCG-SGAVCMARRH 205
G+ + CE ++D +C + AC +C G+ +CG SG + + H
Sbjct: 507 KGDGVHKCE----DID-ECKERTACQCKECKCKNTWGSYECGCSGGLLYMKEH 554
>07_03_1693 -
28756331-28756435,28756558-28756664,28757114-28757245,
28757412-28757478,28757553-28757635,28757824-28757905,
28763101-28763177,28763278-28763361,28763443-28763512,
28763625-28763713,28763801-28764487,28765700-28765997
Length = 626
Score = 37.9 bits (84), Expect = 0.007
Identities = 35/120 (29%), Positives = 46/120 (38%), Gaps = 13/120 (10%)
Frame = -2
Query: 525 VCSCPR----NMTGDPFTFCRPFEARDLCEPNPCGANAKCTPGHDRTGA---ERPVCTCP 367
VC CP GD +T C C+ N G + G + E C CP
Sbjct: 442 VCECPIARGVKFVGDGYTHCEA-SGVGRCQINNGGCWKETKNGKTVSACSNEESKGCKCP 500
Query: 366 TGYIGNALVSCERGECELDSQCSDHLACVGYQCVDPCLGNT------QCGSGAVCMARRH 205
G+ G+ + SCE ++D +C D L C QC D NT CG + R H
Sbjct: 501 PGFKGDGIKSCE----DID-ECKDKLFC---QCKDCSCENTWGSYECSCGGSNMLYMREH 552
>04_01_0377 - 4970034-4970687
Length = 217
Score = 37.1 bits (82), Expect = 0.012
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Frame = -2
Query: 453 CEPNPCGANAKCTPGHDRTGAERP--VCTCPTGYIGNALVSCERGECELDSQCSDHLACV 280
C+ PC A+ KC G + G P +C GY G C G C+ C C
Sbjct: 96 CQNGPCRADIKC--GRNANGELCPNNMCCSQWGYCGLGSEFCGNG-CQ-SGACCPEKRCG 151
Query: 279 GYQCVDPCLGNTQCGSGAVCMARRHLAVCTCPSG 178
D C N C +G C + C SG
Sbjct: 152 KQAGGDKCPNNFCCSAGGYCGLGGNYCGSGCQSG 185
>09_02_0533 -
10325681-10326211,10326260-10326328,10326758-10326855,
10326968-10327117,10327848-10327976,10328063-10328999
Length = 637
Score = 35.9 bits (79), Expect = 0.028
Identities = 35/131 (26%), Positives = 50/131 (38%), Gaps = 2/131 (1%)
Frame = -2
Query: 606 CVYNACIDPCVNSCGVNADCNLRGLTPVCSCPRNMTGDPFTF--CRPFEARDLCEPNPCG 433
C Y + D C+++ N+ C+ L C C G+P+ C + + C
Sbjct: 271 CTYESAPD-CLSA---NSFCHAYDLGYKCHCSDGYQGNPYIRGGCHDIDECKSPQDYSCY 326
Query: 432 ANAKCTPGHDRTGAERPVCTCPTGYIGNALVSCERGECELDSQCSDHLACVGYQCVDPCL 253
N TPG +C CP GY NA S G C+ +C YQC C+
Sbjct: 327 GNCNNTPGSH-------ICDCPRGYERNA--STPNG-CKDIDECGHRET---YQCYGECI 373
Query: 252 GNTQCGSGAVC 220
N G +C
Sbjct: 374 -NFPGGFDCLC 383
>03_02_0917 +
12372122-12372422,12372487-12372524,12373103-12373186,
12373796-12374504,12374641-12374729,12374834-12374903,
12374977-12375060,12375097-12375239,12375337-12375418,
12375605-12375687,12375769-12375835,12376287-12376376,
12377631-12377737,12377862-12377969
Length = 684
Score = 34.7 bits (76), Expect = 0.064
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 8/107 (7%)
Frame = -2
Query: 525 VCSCPR----NMTGDPFTFCRPFEARDLCEPNPCGANAKCTPGHDRTGAERPV---CTCP 367
VC CP GD +T C CE G + G + V C CP
Sbjct: 513 VCECPVVKGVKFVGDGYTNCEA-SGIGRCEIKNGGCWKETRNGKTISACSNEVSEGCKCP 571
Query: 366 TGYIGNALVSCER-GECELDSQCSDHLACVGYQCVDPCLGNTQCGSG 229
G+ G+ + SCE EC+ C C G C + G+ +C G
Sbjct: 572 PGFKGDGIKSCEDIDECKEKLYCQ----CKGCSC-ENTWGSYECSCG 613
>08_02_0350 + 16123139-16124041
Length = 300
Score = 33.9 bits (74), Expect = 0.11
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Frame = -3
Query: 632 ASVPXTSPPVCTTLASIPXXXXXXXXXXXXXXX*PQSVPALET*PGIPSLFADPLRPVIY 453
A+V + P TT A++P + PA + PG PS A L
Sbjct: 10 AAVVSSVSPAVTTSATLPDVPDVLTPAVESVA---MAAPAATSLPGAPSPAASSLGLAAL 66
Query: 452 ASPTRVEPT--PSAPQVT--TAPVLSVRSALVLPG 360
+P PT PSAP V+ +P+ +VR L+L G
Sbjct: 67 VTPACFSPTALPSAPVVSPLASPLCAVRRVLLLSG 101
>07_01_0313 + 2216498-2216953
Length = 151
Score = 33.5 bits (73), Expect = 0.15
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Frame = -3
Query: 524 SVPALET*PGIPSLFADPLRPVIYASPTRVEPT----PSAPQVTTAPVLSVRS--ALVLP 363
+VPA+ P IP++ P I A P P P+ P VT P+ +V + A+ LP
Sbjct: 45 AVPAMPK-PTIPTIVPAVTLPPIPAVPKVTLPPMPAIPTVPAVTMPPMPAVPAVPAVTLP 103
Query: 362 GTSETPLFPANVGSVNWILSAPITWPALVTSAWIPVSVTLNAVPAPFVWP 213
P P N ++ A + PAL A P++ N VP PF+ P
Sbjct: 104 PMPAVPTVPPN----TVVVPAAVV-PALPKVALPPMAAVPN-VPMPFLAP 147
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = -3
Query: 614 SPPVCTTLASIPXXXXXXXXXXXXXXX*PQSVPALET*PGIPSLFADPLRPVIYASPTRV 435
SPP+ T + I S P E PG P + P P I SP +
Sbjct: 545 SPPIVTPMPPIIYPSPPEVTPSPPEITPYPSPP--EVTPGPPEITPYPSPPEITPSPPEI 602
Query: 434 EPTPSAPQVTTAP 396
P PS P+V +P
Sbjct: 603 TPYPSPPEVVPSP 615
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 500 PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAP 396
P P + P P + SP ++ P PS P+VT +P
Sbjct: 597 PSPPEITPYPSPPEVVPSPPKITPYPSPPEVTPSP 631
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 509 ET*PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAP 396
E PG P + P P I SP + P PS P++ +P
Sbjct: 486 EVVPGPPEINPYPSPPEIVPSPPEITPYPSPPEIVPSP 523
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 509 ET*PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAP 396
E P P + P P I SP + P PS P++ +P
Sbjct: 438 EVTPSPPEIAPYPSPPEIVPSPPEITPYPSPPEIVPSP 475
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 500 PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAP 396
P P + P P I SP + P PS P+V P
Sbjct: 457 PSPPEITPYPSPPEIVPSPPEITPYPSPPEVVPGP 491
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 500 PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAP 396
P P + P P I SP + P PS P++ +P
Sbjct: 505 PSPPEITPYPSPPEIVPSPPEITPYPSPPEIVPSP 539
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 473 PLRPVIYASPTRVEPTPSAPQVTTAP 396
PL PV+Y SP V TPS P++ P
Sbjct: 427 PLPPVVYPSPPEV--TPSPPEIAPYP 450
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 500 PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAP 396
P P + P P + P + P PS P++ +P
Sbjct: 473 PSPPEITPYPSPPEVVPGPPEINPYPSPPEIVPSP 507
>10_08_0026 -
14253680-14253894,14253981-14254109,14254704-14254769,
14254887-14255133
Length = 218
Score = 32.3 bits (70), Expect = 0.34
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 603 VYNACIDPCVNSCGVNADCNLRGLTPVCSCP 511
++N + PC+ +C DC+ +GL+P S P
Sbjct: 136 MFNLTMFPCIKNCAFGKDCSAQGLSPPGSPP 166
>02_05_1156 - 34528204-34529411,34529982-34530122,34530214-34531072
Length = 735
Score = 31.5 bits (68), Expect = 0.60
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = -2
Query: 432 ANAKCTPGHDRTGAERPVCTCPTGYIGNALVSCERGECELDSQCS-DHLACVGYQCVDPC 256
AN+ C D T E C C GY GN + G C+ +C D AC G +C +
Sbjct: 254 ANSDCV---DSTEGEGYRCNCSRGYEGNPYLD---GGCQDIDECERDKDACFGNKCTNT- 306
Query: 255 LGNTQCGSGAVCMARRHLAVCTCPSGHNGDALV 157
LG G +CM CP G G+ L+
Sbjct: 307 LG------GYLCM---------CPPGARGNPLI 324
>10_06_0035 -
9896289-9896390,9897394-9897503,9897587-9897715,
9898734-9898800,9898888-9898970,9899878-9899959,
9900049-9900125,9900206-9900289,9900368-9900437,
9900580-9900668,9900921-9901613,9902833-9903142
Length = 631
Score = 31.1 bits (67), Expect = 0.79
Identities = 31/117 (26%), Positives = 44/117 (37%), Gaps = 10/117 (8%)
Frame = -2
Query: 525 VCSCPR----NMTGDPFTFCRPF-EARDLCEPNPCG---ANAKCTPGHDRTGAERPVCTC 370
VC CP GD ++ C P + L C N K +G + C C
Sbjct: 448 VCECPTFNGVQFKGDGYSNCEPAGPGKCLINHGGCWHETRNGKTFSACQESGNGK--CQC 505
Query: 369 PTGYIGNALVSCER-GECELDSQCSDHLACVGYQCVDPCLGNTQCG-SGAVCMARRH 205
P G+ G+ + CE EC+ C C C D G+ +C SG + + H
Sbjct: 506 PAGFRGDGVKKCEDINECKEKKACQ----CPECSCRD-TWGDYECTCSGDLLYIKEH 557
>07_01_0310 + 2209084-2209554
Length = 156
Score = 31.1 bits (67), Expect = 0.79
Identities = 27/110 (24%), Positives = 49/110 (44%)
Frame = -3
Query: 524 SVPALET*PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAPVLSVRSALVLPGTSETP 345
++P + P IP+ P+ V + P P+ P+V P+ +V + +P + P
Sbjct: 29 TLPPMPAIPAIPAATLPPIPAVPTVPNAALPPMPAVPKVALPPMPAVPAVPTVPAVALPP 88
Query: 344 LFPANVGSVNWILSAPITWPALVTSAWIPVSVTLNAVPAPFVWPGDILPS 195
+ PA V +V P+ V +A +P + AVP + P +P+
Sbjct: 89 M-PA-VPAVPTATLPPMPAVPAVPNAVLP---PIPAVPKVTLPPMPSIPA 133
>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 31.1 bits (67), Expect = 0.79
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 573 NSCGVNADCNLRGLTPVCSC 514
N+C + +DCN +GL +CSC
Sbjct: 1404 NACMLYSDCNQKGLCAICSC 1423
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 31.1 bits (67), Expect = 0.79
Identities = 29/112 (25%), Positives = 41/112 (36%)
Frame = -2
Query: 480 CRPFEARDLCEPNPCGANAKCTPGHDRTGAERPVCTCPTGYIGNALVSCERGECELDSQC 301
C +D+C P PCG + PG + C C + SC D C
Sbjct: 387 CGNHACQDICHPGPCG-ECELMPG------KVTACHCGKTRLLEKRASCLDPIPTCDKVC 439
Query: 300 SDHLACVGYQCVDPCLGNTQCGSGAVCMARRHLAVCTCPSGHNGDALVNCYE 145
L C ++C C C V + +R C C G +G +V CY+
Sbjct: 440 DKKLPCGVHRCKVTC-HEGDCPPCVVRVEQR----CRC--GSSGQ-MVECYK 483
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -2
Query: 273 QCVDPCLGNTQCGSGAVCMARRHLAVCTCPSGHNGDA 163
+C PC N QCG A C H + C P NGDA
Sbjct: 639 RCNQPCGKNRQCGMHA-CNRSCHPSPCDPPPA-NGDA 673
>07_01_0312 + 2214050-2214556
Length = 168
Score = 30.7 bits (66), Expect = 1.0
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Frame = -3
Query: 524 SVPALET*PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAPVLSVRSALVLPG----- 360
++P + P +P+ P+ V + P P+ P+V P+ +V + +P
Sbjct: 49 TLPPMPAIPAVPAATLPPMPAVPTVPNAALPPMPAVPKVALPPMPAVPAVPTVPAVPAVP 108
Query: 359 TSETPLFPANVGSVNWIL----SAP-ITWPALVTSAWIPVSVTL---NAVPAPFVWP 213
+ P PA N +L + P +T P + + +P VTL +VP PF+ P
Sbjct: 109 AASLPPMPAVPAVPNAVLPPMPAVPKVTLPPMPSMPAVP-KVTLPPMPSVPMPFLAP 164
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = -3
Query: 452 ASPTRVEPTPSAPQVTTAPVLSVRS--ALVLPGTSETPLFPANVGSVNWILSAPITWPAL 279
A+P P P+ P VT P+ ++ + A LP P P N + P +
Sbjct: 34 ATPPAAVPVPTVPAVTLPPMPAIPAVPAATLPPMPAVPTVP-NAALPPMPAVPKVALPPM 92
Query: 278 VTSAWIPVSVTLNAVPAPFVWPGDILPS 195
+P + AVPA + P +P+
Sbjct: 93 PAVPAVPTVPAVPAVPAASLPPMPAVPA 120
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -3
Query: 524 SVPALET*PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAPVLSVRSALVLPGTS 354
S+P + P +P+ P+ V + + P+ P+VT P+ SV + P S
Sbjct: 111 SLPPMPAVPAVPNAVLPPMPAVPKVTLPPMPSMPAVPKVTLPPMPSVPMPFLAPPPS 167
>12_02_0849 - 23640091-23640279,23640537-23640677,23640756-23642203,
23642300-23642372,23642452-23642572,23642689-23642791,
23642979-23643052,23643140-23643285,23643368-23643476,
23643580-23643704,23643989-23644342,23644440-23644503,
23644581-23645032
Length = 1132
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -3
Query: 470 LRPVIYASPTRVEPTPSAPQVTTAPVLSVRSALVL-PGTSETPLFPANVGSVNWILSAPI 294
+ PV P+ +EP P+ + PV+ R +V+ P + P+ V + I++ P+
Sbjct: 885 IEPVPTRKPSVIEPVPTRKPMAIEPVVPTRKPIVIEPVPTRKPIVIEPVPTRKPIVTEPL 944
Query: 293 TWPALVTSAWIPVSVTLNAVPAP 225
P + P S+T V P
Sbjct: 945 --PTRKPTVIEPASLTQKIVSEP 965
>12_02_0501 +
19742007-19742143,19742253-19742398,19742559-19742596,
19742715-19742765,19743010-19743125,19743348-19743447,
19743537-19743572,19743724-19743774,19743906-19744029,
19744319-19744444,19744572-19744729
Length = 360
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -3
Query: 332 NVGSVNWI-LSAPITWPALVTSAWIPVSVTLNAVPAPFVWPGDILPSALVLQDTMAMLS* 156
N+ +N + LS+ + TSA +P+S+ + ++P P++ G L S+ +L + ++
Sbjct: 286 NIALLNLVKLSSALVASLTATSA-VPISIYILSLPLPYIPHGAELSSSFILGGVVLLMGL 344
Query: 155 TAMNLNQ 135
NL Q
Sbjct: 345 IIYNLPQ 351
>11_08_0003 +
27492503-27492812,27492863-27493148,27495399-27495652,
27496645-27496830,27497042-27498117
Length = 703
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -2
Query: 408 HDRTGAERPVCTCPTGYIGNALVSCERGECELDSQCSDHLACVGYQCVDPCLGNTQC--- 238
++R E +C C GY GN + G ++D +C Y + PC ++C
Sbjct: 254 NNRNNGEGYICKCSEGYDGNPYLKGNGGCIDID-ECHLRTKSSIYGQLYPCYNGSRCQNT 312
Query: 237 GSGAVCMAR 211
G C+ R
Sbjct: 313 DGGYKCICR 321
>09_06_0278 +
21991016-21992120,21992341-21992702,21992766-21993459,
21994064-21994191
Length = 762
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -2
Query: 525 VCSCPRNMTGDPFTF--CRPFEARDLCEPNPCGANAKCTPGHDRTGAERPVCTCPTGYIG 352
VC C + G+P+ C+ + + N C TPG +C CP G G
Sbjct: 303 VCRCDKGYDGNPYVAGGCQDINECERAKENGCFGECTNTPGAF-------LCRCPHGARG 355
Query: 351 NALV 340
NA +
Sbjct: 356 NATI 359
>07_01_0945 - 7973736-7974275,7974446-7974580
Length = 224
Score = 30.3 bits (65), Expect = 1.4
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Frame = -3
Query: 428 TPSAPQVTTAPVLSVRSALVLPGTSETPLFPANVGSVNWILSAPITWPA---LVTSAWIP 258
T AP T S AL+ G +TP+ + GSV + P T A LVT +P
Sbjct: 72 TAPAPAPTQDAASSKNGALLSCGDDDTPV--SRNGSVVTSIDKPATAAASTPLVTIPKLP 129
Query: 257 VSVTLNAVPA-PFVWPGDILPSALVLQDTMAMLS*TAMNLNQ*WPRPATTGTR 102
+L +P+ P I+P A L LS WPR A+TG R
Sbjct: 130 APDSLVILPSVDRPQPEFIIPDAAYLGAPAPPLSSPCR-----WPRVASTGAR 177
>04_01_0609 +
7966263-7966366,7967945-7968706,7972607-7972851,
7976940-7977107,7977471-7977734,7977962-7978509
Length = 696
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
Frame = -2
Query: 480 CRPFEARDLCEP-NPCGAN-AKCTPGHDRTGAERPVCTCPTGYIGNALVSCERGECELDS 307
CRP D P C +N +KC + +G + C C GYIGN +
Sbjct: 321 CRPETNYD--SPFGACHSNHSKCA--NVTSGLDGYFCNCSEGYIGNPYIP---------D 367
Query: 306 QCSDHLACVGYQCVDPCLGNTQCGSGAVCMARRHLAVCTCPSGHNGD 166
C D V+ C N+ CG+G+ C C C G D
Sbjct: 368 GCKD---------VNECENNSICGAGSTCKNTEGSYRCDCNFGQRRD 405
>03_04_0116 + 17406702-17409008,17409385-17409501,17409502-17409561
Length = 827
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -2
Query: 441 PCGANAKCTPGHDRTGAERPVCTCPTGYIGNALVSCERG-ECELDSQCS 298
PC + C P + P C+CP GY N+ + +G + +D CS
Sbjct: 281 PCNIHGLCGPNGICHYSPTPTCSCPPGYEMNSHGNWSQGCKAIVDISCS 329
>08_01_0842 - 8252232-8253155
Length = 307
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -3
Query: 500 PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAPVLSVRSALVLPGTSETPLFPANVGS 321
P + + A+ ASP+ +P P VTT P +V+S L L T+ + A+V S
Sbjct: 94 PVVGAAAAEAAAAAASASPSSSPVSPPLPPVTTQPAAAVKS-LTLDFTNPAKVAAASVTS 152
Query: 320 VNWILS 303
++ S
Sbjct: 153 TSFFSS 158
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = -3
Query: 302 APITWPALVTSAWIPVSVTLNAVPAPFVWPGDILPSALVLQDTMAMLS*TAMNLNQ*WPR 123
AP+ PA + + PV T AP + PG ++P L + D ++ A+++ +
Sbjct: 166 APLV-PAPPPAPFPPVP-TPGMTQAPQMVPGALIPMVLPITDPPEEINEVAIDVER---E 220
Query: 122 PATTGTRGMVTTHYPPPKLQM 60
GT G T Y PPKL +
Sbjct: 221 EDEGGTVGETFTDYRPPKLSL 241
>04_03_0600 -
17856213-17856382,17856434-17857393,17857644-17857808,
17858357-17858399
Length = 445
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -2
Query: 441 PCGANAKCTPGHDRTGAERPVCTCPTGYIGNALV--SCER 328
PC N K PGH CTCP G GNA V +C++
Sbjct: 26 PCYGNCKNIPGHFD-------CTCPKGTRGNAFVEGACQK 58
>11_08_0005 +
27536091-27536761,27539697-27539890,27540097-27540255,
27540385-27541493
Length = 710
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -2
Query: 309 SQCSDHLACVGYQCVDPCLGNTQCGSGAVCMARRHLAVCTCPSGHNGDALVN---CYESQ 139
S C++ GY +D C +C +G+ C C C GD +N C+ +
Sbjct: 276 SYCANATNGDGYLYIDECKEPDRCSTGSRCHDTEGGYYCKCRFPRRGDGKINGKGCHLPK 335
Query: 138 SVVAS 124
+V +
Sbjct: 336 DIVVT 340
>11_08_0004 +
27518384-27519018,27519147-27519397,27520437-27520559,
27523499-27524529
Length = 679
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = -2
Query: 399 TGAERPVCTCPTGYIGNALVS--C-ERGECELDSQCSDHLACV-GYQCVD 262
T + +C C TGY GN V+ C ECEL + C G +C D
Sbjct: 271 TNGDGYLCNCSTGYAGNPYVTGGCININECELRREEPTKYPCYGGSRCYD 320
>11_05_0065 +
18766566-18766576,18767023-18767083,18767170-18767268,
18767346-18767467,18767577-18767673,18767778-18767824,
18768020-18768203,18768349-18768400,18768795-18768985,
18769072-18770020,18770866-18771022,18771134-18771206,
18771292-18771465,18771880-18771993,18772110-18772236,
18772331-18772443,18772614-18772729,18772847-18773000
Length = 946
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 413 QVTTAPVLSVRSALVLPGTSETPLFPANVGSVNWILSAPITWPALVTSAWI 261
+ +P ++++ L P + P PAN GS+ + P+T A+ T+ W+
Sbjct: 292 ETLASPTKTIKNMLAAPSS---PSSPANGGSIKIVQMTPVT-SAMTTAKWL 338
>09_04_0475 -
17913982-17914772,17914830-17915156,17915323-17915493,
17915583-17915824,17915862-17916049,17916184-17916253,
17916329-17916612
Length = 690
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -2
Query: 282 VGYQCVDPCLGNTQCGSGAVCMARRHLAVCTCPSGHNGDALVNCYESQSVVAS 124
+G + ++ CL NT +C C+CP G N A C Q + S
Sbjct: 258 LGCRDINECLDNTTYPCAGICENTIGSYKCSCPQGQNELARGVCVPDQKIQKS 310
>08_02_0421 - 16932354-16932427,16932909-16933076,16933443-16934544
Length = 447
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = -2
Query: 381 VCTCPTGYIGNALVSCERGECELDSQCSDHLACVGYQCVDPCLGNTQCGSGAVCMARRHL 202
+C C GY GN V G+C ++C ++ PC G VC
Sbjct: 349 ICNCTAGYHGNPYVV---GDCTDINECE-------HKDEYPCYG--------VCTNTAGS 390
Query: 201 AVCTCPSGHNGDALV 157
C+CP G +G+A V
Sbjct: 391 YACSCPKGSSGNASV 405
>07_03_0831 -
21810002-21810319,21810423-21810573,21810660-21810897,
21811011-21811221,21811336-21811559,21811696-21811806,
21813265-21813636,21813810-21814782
Length = 865
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 444 NPCGANAKCTPGHDRTGAERPVCTCPTGY 358
N CG NA+CT + P+CTC TG+
Sbjct: 303 NLCGDNAECTADDNE-----PICTCFTGF 326
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = -2
Query: 582 PC--VNSCGVNADCNLRGLTPVCSC 514
PC N CG NA+C P+C+C
Sbjct: 298 PCHRYNLCGDNAECTADDNEPICTC 322
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 261 PCLGNTQCGSGAVCMARRHLAVCTCPSG 178
PC CG A C A + +CTC +G
Sbjct: 298 PCHRYNLCGDNAECTADDNEPICTCFTG 325
>04_04_1120 +
31037811-31038813,31038903-31038991,31039094-31039163,
31039270-31039353,31039452-31039528,31039631-31039712,
31039847-31039929,31040270-31040333,31040435-31040566,
31040674-31040777,31040901-31040996,31041144-31041251
Length = 663
Score = 29.5 bits (63), Expect = 2.4
Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Frame = -2
Query: 525 VCSCPR----NMTGDPFTFCRPFEARDLCEPNPCGANAKCTPGHDRTG---AERPVCTCP 367
+C CP GD +T C+ C N G G + ++ C CP
Sbjct: 448 ICQCPVVDGVQYQGDGYTHCKAV-GPGRCAMNNGGCWKGTRDGKTFSACSDSDLSGCKCP 506
Query: 366 TGYIGNALVSCERGECELDSQCSDHLACVGYQC 268
G+ G+ L CE +CS+ LAC C
Sbjct: 507 PGFKGDGL------HCEDVDECSEKLACSCPHC 533
>04_03_0588 +
17595299-17596151,17597519-17597665,17598562-17598837,
17599108-17599805
Length = 657
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = -2
Query: 582 PCVNSCGVNADCNLRGLTPVCSCPRNMTGDPFT----FCRPFEARDLCEPNPCGANAKCT 415
PC+++ + D G +C+C + G+P+ C+ D + PC KC
Sbjct: 246 PCISNNSICLDSQ-NGPGYICNCRKGFQGNPYNKGLDSCQDINECDDPKKYPC--YGKCI 302
Query: 414 PGHDRTGAERPVCTCPTGYIGNALVSCERGECELD 310
++ G C CP G GNA V G C D
Sbjct: 303 ---NKLGGFD--CFCPAGMRGNASV----GPCRKD 328
>02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203
Length = 740
Score = 29.5 bits (63), Expect = 2.4
Identities = 27/90 (30%), Positives = 34/90 (37%), Gaps = 6/90 (6%)
Frame = -2
Query: 597 NACIDPCVNSCGVNADCNL-RGLTPVCSCPRNMTGDPFTF--CRPFEARDLCEPN-PCGA 430
NA CV++ D RG +C+C G+P+ C+ D PC
Sbjct: 238 NASAYACVSANSECVDSRYGRGRGYLCNCSAGYDGNPYLLDGCQDINECDESRFRYPCSV 297
Query: 429 NAKC--TPGHDRTGAERPVCTCPTGYIGNA 346
C TPG CTCP IGNA
Sbjct: 298 PGTCVNTPGGF-------TCTCPDKTIGNA 320
>01_06_1588 + 38474698-38477169
Length = 823
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 441 PCGANAKCTPGHDRTGAERPVCTCPTGYI 355
PCG + C RP C+CP GY+
Sbjct: 287 PCGIHGLCGWNGLCVYTPRPACSCPPGYV 315
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 3.2
Identities = 31/102 (30%), Positives = 44/102 (43%)
Frame = -3
Query: 518 PALET*PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAPVLSVRSALVLPGTSETPLF 339
PA P P P PVI P P P+AP + + P +V+S LP + L
Sbjct: 1219 PAPVILPPPPVKSPPPPAPVISPPPPEKSPPPAAPVILSPP--AVKS---LPPPAPVSLP 1273
Query: 338 PANVGSVNWILSAPITWPALVTSAWIPVSVTLNAVPAPFVWP 213
P V S+ AP++ P V + P + ++P P V P
Sbjct: 1274 PPPVKSLP--PPAPVSLPPPVVKSLPPPAPV--SLPPPAVKP 1311
>04_04_1211 + 31783076-31783680,31784162-31784427,31784546-31785378
Length = 567
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 183 KDKCRRQDVSWPYKRRRNRIECYRDRDPRTGNQRRPGDRSTENPVHTP 326
KD+ Q+++ Y++ + E + + R G+Q PG + E+ H P
Sbjct: 275 KDQLIDQNLNIMYRQATRKAELFMGQPYRAGDQPEPGAGTVESVPHNP 322
>03_06_0604 - 35006004-35008580
Length = 858
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = -2
Query: 612 PACVYNACIDPC--VNSCGVNADCNLRGLTPVCSCPRNMTGDPFTFCRPFEARDLC 451
P ++A D C CG C G +PVC CP + F P + R C
Sbjct: 268 PTEQWSAVADQCQVFGYCGNMGVCGYNGTSPVCRCP----SENFQLSNPADPRGGC 319
>03_05_0524 -
25181432-25181483,25181565-25181691,25181776-25181826,
25182159-25182314,25182405-25182905,25182999-25183713,
25183797-25183867,25183974-25184103,25185706-25186167
Length = 754
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -3
Query: 527 QSVPALET*PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAPVLSVRSALVLPGTSET 348
+ VPAL P P L + P + P VEP SAP V P A++ P T
Sbjct: 341 EEVPALS--PSPPPLHGSVMPPPL--PPATVEPVISAPMVEPPP----PPAMITPLPPST 392
Query: 347 PLF 339
P+F
Sbjct: 393 PVF 395
>12_02_0090 + 13493311-13494180
Length = 289
Score = 28.7 bits (61), Expect = 4.2
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Frame = -3
Query: 428 TPSAPQVTTAPVLSVRSALVLPGTSETPLFPANVG--------SVNWILSAPITWPALVT 273
TP+AP TTAP L + +++P T+ P PA SVN ILS I P+ T
Sbjct: 87 TPTAPSQTTAPSL---ATILVPATTSAPK-PATASSPTKVPALSVNPILSI-IGVPSPTT 141
Query: 272 SAWIPVSVTLNAVPAP 225
++ + + T AV P
Sbjct: 142 TSSLATTTTSTAVLFP 157
>06_03_0773 - 24493772-24494252,24494377-24495758
Length = 620
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 438 CGANAKCTPGHDRTGAERPVCTCPTGY 358
CG N+ C G D R C CPTGY
Sbjct: 324 CGPNSYCVSGDDG----RLDCACPTGY 346
>03_02_0741 - 10857656-10857844,10858315-10858848,10859516-10859824,
10860521-10860622,10861446-10861613,10862734-10862847,
10863003-10863107,10863206-10863336,10863680-10863804,
10863890-10864061,10864411-10864505,10864771-10864841,
10864923-10865009,10865119-10865184,10865401-10865499,
10866631-10866672,10866757-10866822,10866910-10867101,
10867224-10867289,10868473-10868811
Length = 1023
Score = 28.7 bits (61), Expect = 4.2
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +1
Query: 175 VS*RTSADGKMSPGHTNGAGTALSVTETGIHALVTNA--GQVIGALRIQFT-LPTFAGNK 345
VS TSAD K +P +T+G A TE + ALV A + + + + + L F G K
Sbjct: 763 VSKETSADDKATPTNTSGKMEANEHTEEVMEALVDEALVDKTVEKVVVDASNLDNFVG-K 821
Query: 346 GVSDVPGRTSADRTLSTGAVVTWGALGVGST 438
V P R + + W A+G GST
Sbjct: 822 AVFQ-PERIYDQTPVGVVMGLAWNAMG-GST 850
>01_06_0347 + 28592552-28593502
Length = 316
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -3
Query: 494 IPSLFADPLRPVIYASPTRVEPTPSAPQVTTAPVLSVRSALVLPGTS 354
+P L P RPV+++ + P+ P + S S+L PG++
Sbjct: 64 VPMLLPSPTRPVVFSMQPHFDLVPALPPSSPQVPQSSLSSLSAPGST 110
>12_02_1094 +
26032135-26032164,26032975-26033152,26033234-26034017,
26034135-26034216,26034968-26035177
Length = 427
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 417 TPGHDRTGAERPVCTCPTGYIGNALVSCERGECELDSQCSDHLACVGYQ 271
TP T + P+C+ PT G A S E EL + +A +G Q
Sbjct: 218 TPAGAATPSLSPLCSVPTSPRGAASASSASSERELQIRTRREIAALGLQ 266
>11_08_0023 +
27741775-27742475,27744163-27744413,27744557-27744715,
27744976-27745409,27745537-27746076
Length = 694
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/82 (25%), Positives = 29/82 (35%)
Frame = -2
Query: 399 TGAERPVCTCPTGYIGNALVSCERGECELDSQCSDHLACVGYQCVDPCLGNTQCGSGAVC 220
T + +C C GY GN + G C+D +D C +C +G+ C
Sbjct: 291 TNGDGYLCKCSEGYDGNPYLKGNGG-------CTD---------IDECKEPDRCSTGSRC 334
Query: 219 MARRHLAVCTCPSGHNGDALVN 154
C C GD VN
Sbjct: 335 HNTEGYYYCKCRFPRRGDGKVN 356
>11_08_0022 +
27733247-27733935,27735722-27735981,27736213-27736404,
27737695-27738686
Length = 710
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 399 TGAERPVCTCPTGYIGNALVSCERGECELDSQCS-DHLACVGYQCVDPCLGNTQC 238
T + +C C GY GN V+ + G C ++C Y + PC G ++C
Sbjct: 290 TNGQGYLCKCSPGYDGNPYVTGDSG-CTNINECKLRREDPAKYSELYPCYGGSKC 343
>11_06_0326 - 22382001-22383248
Length = 415
Score = 28.3 bits (60), Expect = 5.6
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Frame = -3
Query: 485 LFADPLRPVIYASPTRVEPTPSAPQVTTAPVLSVRSALVLPGTSETPLFPANVGSVNWIL 306
L ADP R +P P P+A + V A+V G + + N +L
Sbjct: 253 LAADPARKSKPRAPPPPPPAPAAVASPLPALQPVLDAVVASGVGDLAKYAQNPAQAAALL 312
Query: 305 SA-PITWPALVTSAWIPVSVTLNAVPAPFVWPGDILPSALVLQDT 174
PI A++ SA + L PA I P+A+V + +
Sbjct: 313 GKNPILAAAVLNSALASTTAALKPNPAA---ASSINPAAVVARSS 354
>08_02_0270 + 15108178-15108587,15108678-15108774,15109445-15109492,
15109583-15109806,15111367-15111463,15111556-15111651,
15112297-15112544,15112632-15112715,15112787-15113236,
15114880-15115024,15115116-15115217,15115677-15115769,
15117308-15117349,15119085-15119113,15119210-15119251,
15119922-15119997,15120764-15120835,15121208-15121326,
15121428-15121491,15121576-15123009
Length = 1323
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 183 SGHNGDALVNCYESQSVVASTRYYRYKRNGNYTLPAXEAADANGV 49
+G+ D VN Y S S +YR + +YT+ + E+A N V
Sbjct: 1113 NGYAVDPTVNAYGSVSGGTGGSFYRRQNLEDYTMDSSESAQMNPV 1157
>06_01_0743 -
5534743-5534985,5535075-5535172,5535286-5535429,
5535594-5535643,5535733-5535787,5536595-5536686,
5536758-5536806,5536883-5537079,5537160-5537302,
5537625-5537777,5537848-5537896,5537974-5538071,
5538172-5538327,5538434-5538791,5538873-5538943,
5539134-5539217,5539307-5539468,5539534-5539677,
5539769-5540004,5540990-5541374
Length = 988
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -3
Query: 431 PTPSAPQVTTAPVLSVRSALVLPGT-SETPLFPANVG 324
P+P P ++ SA LPGT P+ P NVG
Sbjct: 831 PSPYVPSTPVGQPMTPNSASYLPGTPGGQPMTPGNVG 867
>04_04_1420 + 33441260-33443704
Length = 814
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 438 CGANAKCTPGHDRTGAERPVCTCPTGYIGNALVSCERG 325
CG+N C+ R G P C+CP GY+ N +G
Sbjct: 295 CGSNGICS---FRPG---PTCSCPVGYVPNDASDWSKG 326
>04_03_0611 -
18011469-18012563,18012756-18012920,18013542-18013639,
18014541-18015498
Length = 771
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 429 NAKCTPGHDRTGAERPVCTCPTGYIGNALVSCERG 325
NAKC D TG +C C GY GN + G
Sbjct: 286 NAKCINSSDTTGY---ICRCQEGYQGNPYLKGPNG 317
>02_04_0317 +
21996324-21996681,21996833-21996859,21997299-21998227,
21998317-21999162
Length = 719
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -2
Query: 498 GDPFTFCRPFEARDLCEPNPCGANAKCTPGHDRTGAERPVCTCPT 364
G PFT PF R LC P+P A P E P CP+
Sbjct: 169 GCPFTMFAPFWDRCLCMPDPA---APLLPPKRIAPGELPARRCPS 210
>12_01_0198 - 1461305-1463812
Length = 835
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 267 VDPCLGNTQCGSGAVCMARRHLAVCTCPSGH 175
V+PC+ + CG+ AVC+ VC C G+
Sbjct: 296 VNPCVIHGVCGANAVCL-YSPAPVCVCVPGY 325
>11_01_0192 - 1523572-1526097
Length = 841
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 267 VDPCLGNTQCGSGAVCMARRHLAVCTCPSGH 175
V+PC+ + CG+ AVC+ VC C G+
Sbjct: 296 VNPCVIHGVCGANAVCL-YSPAPVCVCVPGY 325
>08_02_0638 + 19603399-19604679
Length = 426
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = -3
Query: 530 PQSVPALET*PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAPVLSVRSALVLPG 360
P S+PA P P P + SP+ P+PS + T+ + +A+ PG
Sbjct: 194 PSSLPAYLLRPFAQKHHPSPFPP--FPSPSTSSPSPSNIAIATSTAAATTAAVAAPG 248
>07_03_0832 -
21823518-21823826,21823920-21824070,21824148-21824385,
21824469-21824679,21824789-21825009,21825590-21825697,
21825813-21826142,21826740-21827050,21828969-21829651
Length = 853
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = -2
Query: 438 CGANAKCTPGHDRTGAERPVCTCPTGYIGNALVSCERGECELDSQCSDHLAC 283
CGANAKCT D + CTC G+ L G S L C
Sbjct: 311 CGANAKCTAMQD----GKAKCTCLKGFQPKLLDQWNMGNWSQGCVRSPPLGC 358
>07_01_0498 + 3734498-3734976,3736176-3736800
Length = 367
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 239 AVPAPFVWPGDILPSA 192
A+PA FVWP D P+A
Sbjct: 16 AIPAQFVWPADEAPAA 31
>06_03_1133 - 27886823-27887088,27887837-27888629,27888674-27889000
Length = 461
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 491 PSLFADPLRPVIYASPTRVEPTPSAPQVTTAPVLS 387
P L DP P V P+PSA Q + P+++
Sbjct: 183 PPLLLDPSNPFALQQAPVVAPSPSASQANSPPLIN 217
>06_01_0172 + 1362101-1363708
Length = 535
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -3
Query: 479 ADPLRPVIYASPTRVEPTPSAPQVTTAPVLSVRSALVLPGTSETPLFP 336
A PL P + + P+A PVLS A LP S+ P P
Sbjct: 84 APPLPPSLPVFAAVLSRLPAADPALLPPVLSALRAANLPAFSDRPFLP 131
>05_06_0098 + 25560158-25560925
Length = 255
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 452 ASPTRVEPTPSAPQVTTAPVLSVRSALVLPGTSETPLFP 336
+SP+ P P P ++ P L V+P T +T FP
Sbjct: 26 SSPSSHRPPPPPPSSSSQPALPPSPRTVVPRTIDTTPFP 64
>04_04_1030 - 30249160-30250403,30250787-30251666
Length = 707
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = -2
Query: 438 CGANAKCTPGHDRTGAERPVCTCPTGYIGNALVSCERGECEL 313
C N+ C D G C C GY GN + C G L
Sbjct: 261 CKENSYCYEVEDGAGYR---CNCSGGYTGNPYIGCVGGSLGL 299
>04_03_0819 +
20018496-20019487,20019587-20019721,20019834-20019978,
20020135-20020416,20020649-20020910,20021028-20021224,
20021315-20021425,20022341-20022392,20022442-20022584,
20023121-20023210,20023300-20023800,20024108-20024176,
20024866-20025011,20025475-20025530,20026140-20026286,
20027405-20027530,20027608-20027876,20028026-20028127
Length = 1274
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 398 VRS*PGVHLALAPHGLGSHKSRASKGLQKVKGSPVMFLGQEQTGV 532
+ S PG++ A PH L S+ + K + K + MFLG QT V
Sbjct: 497 IASVPGIY-ARNPHYLESNYCLSRKQILHTKSAHRMFLGSVQTSV 540
>04_03_0623 -
18109311-18109853,18109900-18110495,18111292-18111493,
18111616-18111814,18112091-18112191
Length = 546
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 205 SCRLHLSFRTQWRCSRELL*ISISSG 128
+C + R WRCS++L+ S+ SG
Sbjct: 8 NCMTYAKMRVTWRCSKKLVKRSLESG 33
>03_02_0404 -
8165211-8165318,8165397-8165733,8166031-8166242,
8166419-8166526,8166676-8166783,8166884-8166993,
8167122-8167228,8167349-8167566,8167674-8167841,
8168033-8168151,8168438-8168525,8168655-8168849,
8168968-8169271,8169363-8169480,8170034-8170133,
8170283-8170468
Length = 861
Score = 27.9 bits (59), Expect = 7.4
Identities = 28/114 (24%), Positives = 47/114 (41%)
Frame = +1
Query: 187 TSADGKMSPGHTNGAGTALSVTETGIHALVTNAGQVIGALRIQFTLPTFAGNKGVSDVPG 366
TS K + NG+ + L V G + G++ G+ + + + V+ VPG
Sbjct: 498 TSIVVKGDEPYLNGSQSNLLVNSLGHVLQIYINGKLAGSAKGSASSSLISLQTPVTLVPG 557
Query: 367 RTSADRTLSTGAVVTWGALGVGSTRVGLA*ITGLKGSAKSEGIPGHVSRAGTDW 528
+ D +T + +GA VG G+ G K G G ++ + TDW
Sbjct: 558 KNKIDLLSTTVGLSNYGAF---FDLVG----AGVTGPVKLSGPNGALNLSSTDW 604
>01_06_0948 -
33242219-33242530,33242632-33242782,33242874-33243111,
33243196-33243298,33243323-33243406,33243640-33243815,
33243943-33244074,33248406-33248967,33249084-33249842
Length = 838
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 471 FEARDLC-EPNPCGANAKCTPGHDRTGAERPVCTCPTGY 358
+ +D C E +PCGAN C + PVC+C G+
Sbjct: 291 YAPKDQCDEVSPCGANGVCDTNN------LPVCSCLRGF 323
>12_02_1279 + 27510605-27513301
Length = 898
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = -2
Query: 585 DPCVNSCGVNADCNLRGLTPVCSCPRNMTGDPFTFCRPFEARDLCEPNPCGANAKCTPGH 406
DPC+ +++ LR L + PR P + P DL P PC + CTPG
Sbjct: 272 DPCLLK--LDSSGRLRALRLSTTSPRATL--PTVWAAPTGGCDL--PLPCRSLGLCTPGT 325
Query: 405 DRTGAERPVCTCPTGY 358
+ + C+CP +
Sbjct: 326 NGSS-----CSCPDAF 336
>12_01_0367 - 2783507-2784490
Length = 327
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -3
Query: 377 ALVLPGTSE-TPLFPANVGSVNWILSAPITWPALVTSAWIPVSV 249
ALV G S P+ PA + +++WIL P T A+ S+ PVSV
Sbjct: 160 ALVQEGFSAPAPITPAEL-TLSWILIDPATGRAVNASSRRPVSV 202
>11_05_0015 +
18403367-18403729,18404500-18404565,18405121-18405234,
18406109-18406297,18406335-18406667,18406708-18406743,
18407806-18407919,18408506-18408999,18409293-18409716
Length = 710
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -3
Query: 500 PGIPSLFAD--PLRPVIYASPTRVEPTPSAPQV 408
PG+P+ F D P RP Y P+ PT A V
Sbjct: 198 PGLPNNFDDRQPARPAEYLPPSTSHPTQPAAYV 230
>11_01_0196 - 1547373-1549859
Length = 828
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 264 DPCLGNTQCGSGAVCMARRHLAVCTCPSGH 175
+PC + CG+ AVC+ VC C GH
Sbjct: 292 NPCNIHGVCGANAVCL-YSPAPVCVCAPGH 320
>06_03_0478 -
21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 27.5 bits (58), Expect = 9.7
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = +3
Query: 135 LIEIHSSSREHRHCVLKDKCRRQDVSWPYKRRRNRIECYRDRDPRTGNQRRPGDRSTEN- 311
L ++ RE +++ R ++ +R R R+ R ++ R +++ P D E+
Sbjct: 334 LRDLRDRERERERERDRERLRERERERELERERERLRERRMKE-RERDRKHPADSRREHT 392
Query: 312 PVHTPHVRRKQGRFRC---TR*DKCRPDAQHR 398
P TP RR+ R R R DA HR
Sbjct: 393 PPRTPGDRRRSSSVRAEKPLRRPSPRRDAVHR 424
>05_07_0256 + 28713134-28713964
Length = 276
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -3
Query: 434 EPTPSAPQVTTAPVLSVRSALVLP-GTSETPLFPA 333
+P+P P T APV++ A V+P S P PA
Sbjct: 122 QPSPPPPHATEAPVVAAPPAPVVPCAPSVAPAAPA 156
>04_04_1375 +
33040329-33040854,33041611-33041838,33041984-33042081,
33042406-33042450,33042678-33042846,33042917-33043026,
33043983-33044051,33044085-33044158,33044738-33044804,
33044876-33044988,33045148-33045237,33046030-33046144,
33046230-33046388
Length = 620
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 476 DPLRPVIYASPTRVEPTPSAPQVTTAPVLSVRSALVLPGT 357
DP R + AS ++ TP+ P+ PV + RSA V+ T
Sbjct: 54 DPKRRQLAASTIVLDDTPTPPKRRPPPVAADRSASVVADT 93
>04_03_0602 - 17884667-17885817,17885946-17886113,17886413-17887313
Length = 739
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Frame = -2
Query: 558 NADC--NLRGLTPVCSCPRNMTGDPF----TFCRPFEARDLCEPNPCGANAKCTPGHDRT 397
N++C + G C+C + G+P+ CR + + + C + PG
Sbjct: 267 NSECFNSTNGPGYTCNCSKGYEGNPYLEGPNGCRDIDECQDSKTHHCYGECRNKPG---- 322
Query: 396 GAERPVCTCPTGYIGNALV 340
G + C CP G GNA +
Sbjct: 323 GFD---CNCPAGSKGNATI 338
>02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184
Length = 544
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 500 PGIPSLFADPLRPVIYASPTRVEPTPSAPQVTTAPVLSVRSA-LVLPGTSETPLFPANV 327
PG + F+ P P +YASPT PT + + + LS +A +++PG P+ N+
Sbjct: 281 PGQQAKFSPP--PALYASPTPSPPTFAGGYLQSR--LSGETAPMIIPGGGRGPVHNRNM 335
>02_02_0188 +
7617838-7620231,7621856-7622071,7622167-7622328,
7622466-7622516,7622936-7623070,7623161-7623184,
7623341-7623452,7623776-7623901,7624004-7624053,
7624339-7624497,7624582-7624677,7624751-7624866,
7624907-7624984,7624985-7625108,7625193-7625306,
7625423-7625503,7625616-7625756,7625834-7625848
Length = 1397
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 267 VDPCLGNTQCGSGAVCMARRHLAVCTCPSGHNGD 166
+D C T CG +C + C+CPS ++GD
Sbjct: 327 LDDCAYPTVCGDYGICSEGQ----CSCPSRNSGD 356
>02_01_0016 + 110796-110979,111252-111768,111847-112213
Length = 355
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 494 IPSLFADPLRPVIYASPTRVEPTPSAPQVTTAPV 393
+P L + PLRP+ + P+P A + +P+
Sbjct: 138 VPPLLSQPLRPMDFCPSPLTSPSPPALALAPSPI 171
>01_06_0846 +
32408333-32408484,32408560-32408926,32409021-32409301,
32409877-32409931,32410137-32410331,32410417-32410569
Length = 400
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 288 PGDRSTENPVHT-PHVRRKQGRFRCTR*DKCRPDAQHRCGRDLGCTWRWL 434
P D T + H P +R ++ FRC D+ R A R R+ C WR L
Sbjct: 256 PPDHFTYSQDHVNPDIRGRRF-FRCPNYDRERKAAYERQCREQQCDWRVL 304
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,936,157
Number of Sequences: 37544
Number of extensions: 478809
Number of successful extensions: 1883
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1857
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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