Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_N13
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.5  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   4.4  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   4.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   7.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.8  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   7.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -2

Query: 420 CTPGHDRTGAERPVCT-CPTGYIGNALVSCERGECELDSQCSDH 292
           C PG+ +   E+  CT CP G   +   S     C   S+ SD+
Sbjct: 249 CKPGY-QADVEKQECTECPIGKFKHEAGSHSCEACPAHSKSSDY 291


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 189 KCRRQDVSWPYKRRRNRI 242
           KC     SWPY   R RI
Sbjct: 168 KCATDFSSWPYDTHRCRI 185


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 235 TALSVTETGIHALVTNAGQVIGAL 306
           T L+   T IHA+ T A  V+G L
Sbjct: 140 TLLAYQATKIHAVDTYAASVVGYL 163


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 272 SAWIPVSVTLNAVPAPFVWPGDILPSAL 189
           + W+P  +   A P   V P DIL  AL
Sbjct: 317 ACWLPFFILYLATPFVPVEPPDILMPAL 344


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 428 TPSAPQVTTAPVLSVR-SALVLPGTSETPLF 339
           +PS P +T   + SVR S+++  G   + +F
Sbjct: 334 SPSNPSITRTGLSSVRDSSIICGGNKRSQVF 364


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -1

Query: 427 RQVHPRSRPHRC 392
           R++H + RP++C
Sbjct: 139 RRIHTKERPYKC 150


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +2

Query: 446 GSHKSRASKGLQKVKGSPVMFLGQEQTGVKPRRLQSALTPHELTQ 580
           G H+S+A +   +     +M+  Q+Q+    ++ Q  + P +  Q
Sbjct: 184 GQHQSQAQQQHLQAHEQHMMYQQQQQSQAASQQSQPGMHPRQQQQ 228


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,605
Number of Sequences: 438
Number of extensions: 4599
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)