Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_N11
         (573 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0363 + 4754650-4755912                                           28   4.6  
11_03_0022 - 9015408-9015467,9015468-9015560,9017326-9017420,901...    27   8.0  

>04_01_0363 + 4754650-4755912
          Length = 420

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 92  TARGXEAADTDRKKRKGDRHXNTEGRRG 9
           T  G +AAD DR   K ++   TEG RG
Sbjct: 145 TEGGRQAADGDRDDLKNEKEKITEGERG 172


>11_03_0022 -
           9015408-9015467,9015468-9015560,9017326-9017420,
           9018019-9018079,9018601-9018620,9018743-9018824,
           9018919-9019020,9019116-9019532
          Length = 309

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 119 EHXLRXLKQTARGXEAADTDRKKRKGDRHXNTEGRRGQG 3
           +  L+ L++ AR   + D+D ++R  D     EG  G G
Sbjct: 66  DRFLKLLRKRARDYNSDDSDDEERLSDEDEEEEGASGSG 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,078,938
Number of Sequences: 37544
Number of extensions: 194658
Number of successful extensions: 396
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)