Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_N11
         (573 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42391-1|AAC50402.1| 2022|Homo sapiens myosin-IXb protein.             29   8.8  
AB209997-1|BAE06079.1| 2028|Homo sapiens MYO9B variant protein p...    29   8.8  

>U42391-1|AAC50402.1| 2022|Homo sapiens myosin-IXb protein.
          Length = 2022

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 336  GLKKENNKIGRILINNTWKEDMFKNM 413
            G K  N KIG+I ++  W+E +F+ +
Sbjct: 1480 GKKNRNVKIGKITVSEKWRESVFRQI 1505


>AB209997-1|BAE06079.1| 2028|Homo sapiens MYO9B variant protein
            protein.
          Length = 2028

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 336  GLKKENNKIGRILINNTWKEDMFKNM 413
            G K  N KIG+I ++  W+E +F+ +
Sbjct: 1486 GKKNRNVKIGKITVSEKWRESVFRQI 1511


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,672,130
Number of Sequences: 237096
Number of extensions: 1232780
Number of successful extensions: 2130
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2130
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)