Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_N10
(363 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 29 1.00
U80453-4|AAK31441.2| 674|Caenorhabditis elegans Trehalase prote... 27 3.0
AJ512339-1|CAD54512.1| 674|Caenorhabditis elegans trehalase pro... 27 3.0
Z83244-7|CAB05829.1| 318|Caenorhabditis elegans Hypothetical pr... 27 4.0
U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical pr... 27 4.0
AC006677-4|AAF39949.1| 327|Caenorhabditis elegans Serpentine re... 27 5.3
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 26 7.0
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z81076-9|CAB03057.1| 372|Caenorhabditis elegans Hypothetical pr... 26 9.3
Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical pr... 26 9.3
AL032644-3|CAA21668.1| 215|Caenorhabditis elegans Hypothetical ... 26 9.3
AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein. 26 9.3
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 29.1 bits (62), Expect = 1.00
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -1
Query: 183 ENLHYVLPQVPSTIGKSIQGILAYDKTHSTASANITXRWNRVHFRQAPYEERT 25
+ + LPQ+P K + +LA THS+ S ++ NR + R+ + T
Sbjct: 912 DETQFKLPQLPMPPKKKVSPLLARQATHSSKSTTLSVP-NRANLRETKSIDET 963
>U80453-4|AAK31441.2| 674|Caenorhabditis elegans Trehalase protein
5 protein.
Length = 674
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 263 SSVPISIDLWSTITTLSTTPNYSAKGLRTFITFY 162
SS + ID+ +TITT S++ + + T IT +
Sbjct: 636 SSTSLPIDITTTITTSSSSSTFGYSNILTLITVF 669
>AJ512339-1|CAD54512.1| 674|Caenorhabditis elegans trehalase
protein.
Length = 674
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 263 SSVPISIDLWSTITTLSTTPNYSAKGLRTFITFY 162
SS + ID+ +TITT S++ + + T IT +
Sbjct: 636 SSTSLPIDITTTITTSSSSSTFGYSNILTLITVF 669
>Z83244-7|CAB05829.1| 318|Caenorhabditis elegans Hypothetical
protein W06F12.3 protein.
Length = 318
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 191 KGLRTFITFYPRCHPPLASPFRAFWPMIRLTAPLPLTSLQGGIGF 57
+G++ +YP LA+PF +I L P + + GG GF
Sbjct: 5 QGVQKNAEYYPAERGKLAAPFLETGTIIGLKRPFQVEKMVGGGGF 49
>U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical
protein C27F2.4 protein.
Length = 283
Score = 27.1 bits (57), Expect = 4.0
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -1
Query: 279 ECGHLFVGTNINRPMV 232
+ GH+FVG +++RPM+
Sbjct: 73 DAGHMFVGVDVSRPML 88
>AC006677-4|AAF39949.1| 327|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 58 protein.
Length = 327
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 275 AVTYSSVPISIDLWSTITTLSTTPNY 198
AVTY S+ I LWS I+ L+ N+
Sbjct: 240 AVTYGSIYTGILLWSIISALNANFNF 265
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 246 NRPMVYHHNAKYDAKLFRKRVENLHYVLPQVPSTI 142
N+ + +A ++ +LF++ + NL+ V PQ+P I
Sbjct: 130 NQNTINMMSAAFNQQLFKQTLANLNTVTPQLPVNI 164
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 246 NRPMVYHHNAKYDAKLFRKRVENLHYVLPQVPSTI 142
N+ + +A ++ +LF++ + NL+ V PQ+P I
Sbjct: 130 NQNTINMMSAAFNQQLFKQTLANLNTVTPQLPVNI 164
>Z81076-9|CAB03057.1| 372|Caenorhabditis elegans Hypothetical
protein F35C5.8 protein.
Length = 372
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -1
Query: 189 RVENLHYVLPQVPSTIGKSIQGILAYDKTHSTASANITXRWN 64
++ +++ V + S K +Q YD ST IT WN
Sbjct: 42 KIGSMNLVYQTISSLFSKQLQIGTGYDDPRSTRVGFITYNWN 83
>Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical protein
F26A3.8 protein.
Length = 1601
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 361 NELTIVQSHFDNETANHYISPRRCG 287
N I H NE + Y+SPR CG
Sbjct: 1065 NPERIPDFHMGNERSPMYVSPRLCG 1089
>AL032644-3|CAA21668.1| 215|Caenorhabditis elegans Hypothetical
protein Y51H1A.3b protein.
Length = 215
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -2
Query: 293 LW*S*NAVTYSSVPISIDLWSTITTLSTTPNYSAKGLRTFITFYPRCHPPLASP 132
+W V++S++ I L ++ ++ +G TF +YPR H P A P
Sbjct: 7 IWQESCPVSFSALKKWIFLPNSTKIKEKRSSFPVRGPLTFDGWYPRDHKPSAPP 60
>AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein.
Length = 1601
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 361 NELTIVQSHFDNETANHYISPRRCG 287
N I H NE + Y+SPR CG
Sbjct: 1065 NPERIPDFHMGNERSPMYVSPRLCG 1089
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,816,844
Number of Sequences: 27780
Number of extensions: 155652
Number of successful extensions: 447
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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