Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_N10
         (363 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.28 
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    22   1.9  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   1.9  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    22   1.9  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    22   1.9  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    22   1.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   4.5  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   4.5  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    20   7.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.0 bits (52), Expect = 0.28
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 51  ESEPDSTLX*C*RKRCCESYHRPEC 125
           E  P+ST+  C   R C   HRP C
Sbjct: 94  ELSPNSTIAVCVCMRKCPRRHRPVC 118


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -3

Query: 343 QSHFDNETANHYISPRRCG---DRRMRSPIRRYQ 251
           ++H    T++HY   R C    +R  R   RRY+
Sbjct: 220 RTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYE 253


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -3

Query: 343 QSHFDNETANHYISPRRCG---DRRMRSPIRRYQ 251
           ++H    T++HY   R C    +R  R   RRY+
Sbjct: 220 RTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYE 253


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -3

Query: 343 QSHFDNETANHYISPRRCG---DRRMRSPIRRYQ 251
           ++H    T++HY   R C    +R  R   RRY+
Sbjct: 220 RTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYE 253


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -3

Query: 343 QSHFDNETANHYISPRRCG---DRRMRSPIRRYQ 251
           ++H    T++HY   R C    +R  R   RRY+
Sbjct: 220 RTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYE 253


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -3

Query: 343 QSHFDNETANHYISPRRCG---DRRMRSPIRRYQ 251
           ++H    T++HY   R C    +R  R   RRY+
Sbjct: 209 RTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYE 242


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 310 YISPRRCGDRRMRSP 266
           YI+   CGD R+ SP
Sbjct: 366 YINTAPCGDARIFSP 380


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -3

Query: 343 QSHFDNETANHYISPRRCG---DRRMRSPIRRYQ 251
           ++H    T++HY   R C    +R  +   RRY+
Sbjct: 220 RTHGFQHTSSHYSRERSCSRDRNREYKEKDRRYE 253


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 340 SHFDNETANHY 308
           ++FDN+  NHY
Sbjct: 415 ANFDNQDNNHY 425


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,050
Number of Sequences: 438
Number of extensions: 1759
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)