Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_N05
         (478 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019066-1|AAH19066.1|  437|Homo sapiens solute carrier family 1...    31   2.7  
BC012048-1|AAH12048.2|  437|Homo sapiens solute carrier family 1...    31   2.7  
AY704414-1|AAW30130.1|  437|Homo sapiens bile acid transporter S...    31   2.7  

>BC019066-1|AAH19066.1|  437|Homo sapiens solute carrier family 10
           (sodium/bile acid cotransporter family), member 4
           protein.
          Length = 437

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 22/47 (46%), Positives = 26/47 (55%)
 Frame = +1

Query: 118 KRTSLWNTGSQSPTKFLTT*LDKLIFPTQ*MSKMDLFPLLCDKYVLF 258
           KRT    TGSQ+    L T + KL FP Q +  M +FPLL   Y LF
Sbjct: 329 KRTVCLETGSQNVQ--LCTAILKLAFPPQFIGSMYMFPLL---YALF 370


>BC012048-1|AAH12048.2|  437|Homo sapiens solute carrier family 10
           (sodium/bile acid cotransporter family), member 4
           protein.
          Length = 437

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 22/47 (46%), Positives = 26/47 (55%)
 Frame = +1

Query: 118 KRTSLWNTGSQSPTKFLTT*LDKLIFPTQ*MSKMDLFPLLCDKYVLF 258
           KRT    TGSQ+    L T + KL FP Q +  M +FPLL   Y LF
Sbjct: 329 KRTVCLETGSQNVQ--LCTAILKLAFPPQFIGSMYMFPLL---YALF 370


>AY704414-1|AAW30130.1|  437|Homo sapiens bile acid transporter
           SLC10A4 protein.
          Length = 437

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 22/47 (46%), Positives = 26/47 (55%)
 Frame = +1

Query: 118 KRTSLWNTGSQSPTKFLTT*LDKLIFPTQ*MSKMDLFPLLCDKYVLF 258
           KRT    TGSQ+    L T + KL FP Q +  M +FPLL   Y LF
Sbjct: 329 KRTVCLETGSQNVQ--LCTAILKLAFPPQFIGSMYMFPLL---YALF 370


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,789,024
Number of Sequences: 237096
Number of extensions: 1290227
Number of successful extensions: 5540
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5540
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)