Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_N05
(478 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75554-9|CAA99952.2| 278|Caenorhabditis elegans Hypothetical pr... 32 0.19
U64834-3|AAB04824.1| 437|Caenorhabditis elegans Hypothetical pr... 30 0.99
Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 28 4.0
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 28 4.0
U80440-4|AAK21471.1| 186|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 27 5.3
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 27 5.3
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 27 9.2
>Z75554-9|CAA99952.2| 278|Caenorhabditis elegans Hypothetical
protein ZC455.11 protein.
Length = 278
Score = 32.3 bits (70), Expect = 0.19
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -3
Query: 266 SLSKSTYLSHSKGNKSILLIY*VGNISLSNHVVRNFVGDW 147
+LS + Y+ HS G IL+I+ N+ L+ H++R FV DW
Sbjct: 3 NLSTAYYVFHSVG---ILMIF--SNLVLNLHILRKFVNDW 37
>U64834-3|AAB04824.1| 437|Caenorhabditis elegans Hypothetical
protein F54D11.1 protein.
Length = 437
Score = 29.9 bits (64), Expect = 0.99
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3
Query: 236 SKGNKSILLIY*VGNISLSNHVVRNFVGDWLPVFHKDVLFWATAAII 96
S GN + L +Y V + SN+V +NF+ D++ VF K V T A I
Sbjct: 131 SDGNNTGLDLYTVDQVEHSNYVEQNFL-DFIFVFRKKVFAPTTDATI 176
>Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical
protein C15A7.1 protein.
Length = 403
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 221 IYSPYYAINTCFSIENTLLDVYASPILVDHIVS 319
+Y+P I TC I L YA P+LV +++S
Sbjct: 270 LYAPMIFICTCLIISGFLPSEYALPLLVFNLIS 302
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 28 NCKGFSIFLFPCSLQMRNHXXYPIIAAVAQKRTSLWNTGSQSP 156
NC F++ L C+ +R+H I + V K L + S SP
Sbjct: 932 NCTRFAVSLLKCASDIRDHSDCCIASGVTSKCLPLCSGDSFSP 974
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical
protein T04A11.3 protein.
Length = 1014
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 28 NCKGFSIFLFPCSLQMRNHXXYPIIAAVAQKRTSLWNTGSQSP 156
NC F++ L C+ +R+H I + V K L + S SP
Sbjct: 738 NCTRFAVSLLKCASDIRDHSDCCIASGVTSKCLPLCSGDSFSP 780
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 28 NCKGFSIFLFPCSLQMRNHXXYPIIAAVAQKRTSLWNTGSQSP 156
NC F++ L C+ +R+H I + V K L + S SP
Sbjct: 932 NCTRFAVSLLKCASDIRDHSDCCIASGVTSKCLPLCSGDSFSP 974
>U80440-4|AAK21471.1| 186|Caenorhabditis elegans Hypothetical
protein T21E12.5 protein.
Length = 186
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/56 (21%), Positives = 30/56 (53%)
Frame = -1
Query: 373 QSATNKMKHEKIFLRYSARYDVINQYWRRINVQQGVLYRKARIYRIVRGINPSYSS 206
+S + ++ + F Y++ + + NQ +IN + + + ++ +V G+NP +S
Sbjct: 130 ESTLSLIRQKSYFDAYASDFIIRNQQNEKINTVKDEMDAEEMVHHLVHGMNPHKNS 185
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 297 YWLITSYLAEYLRNIFSCFILLVADWCVTS 386
+W T+++A Y+ F L A WC+ S
Sbjct: 213 FWKETAFIAFYVAGTFRYCFTLHATWCINS 242
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 297 YWLITSYLAEYLRNIFSCFILLVADWCVTS 386
+W T+++A Y+ F L A WC+ S
Sbjct: 213 FWKETAFIAFYVAGTFRYCFTLHATWCINS 242
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 297 YWLITSYLAEYLRNIFSCFILLVADWCVTS 386
+W T+++A Y F L A WC+ S
Sbjct: 214 FWKETAFIAFYTAGTFRYCFTLHATWCINS 243
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 297 YWLITSYLAEYLRNIFSCFILLVADWCVTS 386
+W T+++A Y F L A WC+ S
Sbjct: 214 FWKETAFIAFYTAGTFRYCFTLHATWCINS 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,557,664
Number of Sequences: 27780
Number of extensions: 207265
Number of successful extensions: 477
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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