Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_N03
         (642 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0315 - 2111095-2111241,2111496-2111579,2111803-2111883,211...    28   7.2  
03_02_0763 - 10977793-10978092,10978896-10978996,10979580-109796...    27   9.6  

>02_01_0315 -
           2111095-2111241,2111496-2111579,2111803-2111883,
           2112133-2112310,2112447-2112623,2112688-2112734,
           2112845-2112901,2113339-2113437,2113696-2113818,
           2113895-2114017,2114241-2114264,2115096-2115209,
           2115315-2115503,2115691-2115857,2116846-2116930,
           2117698-2117778,2118239-2118424,2119266-2119314,
           2119777-2119810,2120087-2120153,2120198-2120419
          Length = 777

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +2

Query: 5   WNNTGQIMHKTPPLDNMDCSNMYLLTYFIHPTNPVIKNKTKN 130
           W     I H  P    +    +  LTY   PTNP++K    N
Sbjct: 88  WLKIWVIFHPKPKKSTLVWIGLSQLTYLFIPTNPILKFTRSN 129


>03_02_0763 -
           10977793-10978092,10978896-10978996,10979580-10979648,
           10979787-10979857,10979946-10980100,10980348-10980477,
           10980946-10981013,10981335-10981592
          Length = 383

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 185 NIFYMLSTKGYLNYTKSRLIFLHNELSC 268
           NIF+ML   G   YTK  ++    +++C
Sbjct: 93  NIFFMLKVDGDYTYTKGCVVLTSEQVTC 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,299,248
Number of Sequences: 37544
Number of extensions: 245771
Number of successful extensions: 413
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)