Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_M16
         (786 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    25   2.0  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    25   3.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   4.6  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   4.6  

>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 33  LLLVAVLGAHSCSTACEGGCSNTVSIIPKVFASIG 137
           L+LVA L     +T C G C     + PK +A +G
Sbjct: 10  LMLVAAL-----ATLCHGACDEPCPVPPKHYAELG 39


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 406 PIATWCVGQACSMASLLLAAGAP 338
           P ATW   ++C     LLA G P
Sbjct: 178 PRATWIESRSCQTMRELLATGCP 200


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 284 RSTRSSY*YTDTGGRDFKTESTNK*FICE 198
           R T SS   +  GGR +KTES N+ F  E
Sbjct: 205 RLTSSSAHGSRVGGRGWKTESFNEDFFKE 233


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +1

Query: 322 ARAAFRGLQRPATKMPCCMPDRRTTSLLG 408
           +R  +R  Q       CC PDRR   L G
Sbjct: 428 SRRCYRCWQTDHISQDCCGPDRRDCCLRG 456


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 856,679
Number of Sequences: 2352
Number of extensions: 18002
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)