Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_M15
(539 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 305 3e-84
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 65 7e-12
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 51 1e-07
SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces p... 32 0.047
SPBC8E4.03 |||agmatinase 2 |Schizosaccharomyces pombe|chr 2|||Ma... 30 0.19
SPBC1709.09 |||mitochondrial translation termination factor|Schi... 29 0.58
SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit Mts4|... 26 3.1
SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces pomb... 25 5.4
SPAC23A1.18c |mrp51||mitochondrial ribosomal protein subunit L51... 25 5.4
SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces po... 25 7.2
SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyc... 25 7.2
SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces po... 25 9.5
SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2 |Sc... 25 9.5
SPAPB24D3.08c |||NADP-dependent oxidoreductase |Schizosaccharomy... 25 9.5
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 25 9.5
>SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 525
Score = 305 bits (749), Expect = 3e-84
Identities = 148/175 (84%), Positives = 162/175 (92%)
Frame = -2
Query: 538 GSEVXALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPAT 359
GSEV ALLGRIPSAVGYQPTLATDMG MQERITTTKKGSITSVQA+YVPADDLTDPAPAT
Sbjct: 311 GSEVSALLGRIPSAVGYQPTLATDMGAMQERITTTKKGSITSVQAVYVPADDLTDPAPAT 370
Query: 358 TFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSL 179
TFAHLDATTVLSR+I+ELGIYPAVDPLDS SR+MDP I+G EHYN+A VQ++LQ+YKSL
Sbjct: 371 TFAHLDATTVLSRSISELGIYPAVDPLDSKSRMMDPRILGEEHYNLAGSVQQMLQEYKSL 430
Query: 178 QDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIK 14
QDIIAILGMDELSE DKLTV RARK+QRFLSQPF VAEVFTG G+LV L++TI+
Sbjct: 431 QDIIAILGMDELSEADKLTVERARKVQRFLSQPFAVAEVFTGIEGRLVSLKDTIR 485
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 64.9 bits (151), Expect = 7e-12
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Frame = -2
Query: 532 EVXALLGRIPSAVGYQPTLATDMGTMQERITTT--KKGSITSVQAIYVPADDLTDPAPAT 359
EV A +P GY + TD+ T+ ER + GSIT + + +P DD+T P P
Sbjct: 287 EVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDL 346
Query: 358 TFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQD 191
T + + R + IYP ++ L S SR+M I +H +V+ + +
Sbjct: 347 TGYITEGQIFVDRQLHNNAIYPPINVLPSLSRLMKSAIGEGMTRNDHGDVSNQLYAMYAI 406
Query: 190 YKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 83
+ + +++G + LS+ED+L + K ++ F+SQ
Sbjct: 407 GRDAASMKSVVGEEALSQEDRLALEFLGKFEKTFISQ 443
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 50.8 bits (116), Expect = 1e-07
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Frame = -2
Query: 532 EVXALLGRIPSAVGYQPTLATDMGTMQERI-------TTTKKGSITSVQAIYVPADDLTD 374
E+ L +P+ GY L + + ER + ++G+++ V A+ P D +D
Sbjct: 368 EISGRLAEMPADSGYPAYLGAKLASFYERAGRARCLGSPDREGTVSIVGAVSPPGGDFSD 427
Query: 373 PAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH----YNVARG-V 209
P + T + L + +A+ +P+++ S S+ ++ E +N R +
Sbjct: 428 PVTSATLGIVQVFWGLDKKLAQRKHFPSINTSLSYSKYINALQPWYEERVPGFNTLRDQI 487
Query: 208 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 83
++I+Q S+ +II ++G LSE DK+T+ A I+ FL Q
Sbjct: 488 KQIIQQEDSMLEIIQLVGKSALSETDKVTLDIAGIIKNDFLQQ 530
>SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 32.3 bits (70), Expect = 0.047
Identities = 29/116 (25%), Positives = 48/116 (41%)
Frame = -2
Query: 427 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPN 248
GS+T++ I D++ P + D L + GI PA++ S SR+
Sbjct: 347 GSLTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFFKGIRPAINVGLSVSRVGSAA 406
Query: 247 IIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQP 80
+ A VA ++ L Y+ + A G D L + T+ R ++ L QP
Sbjct: 407 QVKAMK-QVAGQIKLFLAQYREVAS-FAQFGSD-LDAGTRATLDRGLRLTELLKQP 459
>SPBC8E4.03 |||agmatinase 2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 30.3 bits (65), Expect = 0.19
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -2
Query: 412 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPA--VDPLDSTSRIMDPNIIG 239
+ I VP D P F + SR +A G P+ V+P +S ++I+D I
Sbjct: 91 IAIIGVPFDTAVSHRPGARFGPKGIRSASSRQMAIRGFNPSLNVNPYESWAKILDCGDIP 150
Query: 238 AEHYNVARGVQKILQDYKSL 179
Y+ V+++ + Y L
Sbjct: 151 VSSYDNQLAVRQMTEGYIDL 170
>SPBC1709.09 |||mitochondrial translation termination
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 28.7 bits (61), Expect = 0.58
Identities = 9/41 (21%), Positives = 22/41 (53%)
Frame = -2
Query: 454 QERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATT 332
QE + +G+ T ++A+++P+ + P P+ + A +
Sbjct: 78 QEAVVLPSQGNFTQLEALFIPSKSIKAPTPSRLLREIAAVS 118
>SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit
Mts4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 436 TKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGI 299
TK G++ + V + DPA A +L+ +V RA A LG+
Sbjct: 439 TKAGALLGIGVTNVAVRNEADPAMAILSEYLETGSVKLRASAILGL 484
>SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 415
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/54 (18%), Positives = 28/54 (51%)
Frame = +2
Query: 344 QVSKSGSWSRICQVISWYINSLYRCDGTFLGGGNSFLHSTHVSSQSRLISYSRW 505
++S++ S+ ++++ Y+ + D F+G SF+ +T +++ + W
Sbjct: 302 RISRADSYDHDIRMLAKYLQEVTLMDEIFIGAHISFIAATAYYLSMQMLGHLDW 355
>SPAC23A1.18c |mrp51||mitochondrial ribosomal protein subunit L51-b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 27 SSGTSLPACPVNTSATWKGCERNL*ILRARATVNLSSSDNSS 152
S G P+ S CE N +R R T ++ SSD S+
Sbjct: 130 SGGIQYSNVPLINSRVTPNCESNCSNIRRRLTAHIISSDAST 171
>SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 449
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = -2
Query: 286 DPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILG 155
+ +D+T + +P I E V + Q ++ + + ++DI++ LG
Sbjct: 371 EEIDATIQTYNPQNIDLEDEAVEKEWQDLVAEEQKVEDIVSTLG 414
>SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 313
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = +1
Query: 301 YP-IQQWLWRVQW*HPS 348
YP I QWL R+ W HP+
Sbjct: 259 YPHINQWLKRLYWKHPA 275
>SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 942
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 436 TKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVL 326
T G IT AIY P D ++ HL AT L
Sbjct: 766 TVGGLITGASAIYTPEDGISLDMLRKDIDHLKATFAL 802
>SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 24.6 bits (51), Expect = 9.5
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -2
Query: 367 PATTFAHLDATTVLSRAIAELGIYPA--VDPLDSTSRIMDPNIIGAEHY 227
P + HLD + L + PA +DPL+ T D IIG + Y
Sbjct: 279 PMDSIDHLDVNDPTATG---LPVLPASDIDPLNLTGNTQDSMIIGQQTY 324
>SPAPB24D3.08c |||NADP-dependent oxidoreductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 349
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 253 PNIIGAEHYN--VARGVQKILQDYKSLQDIIAILGMDE 146
P +G YN VA+ V+ L YK D++ + G +E
Sbjct: 74 PLELGKPFYNSTVAKVVKSTLDQYKPGMDVVFVSGWEE 111
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +2
Query: 365 WSRICQVISWYINSLYRCDGTFLGGGNSFLHSTHVSSQSRLISYSRWDTTKQSXH 529
W+ I + W + S + GN F SS SRLI +S QS H
Sbjct: 619 WNVISASVQWTLASKFTGLLASSSSGNDFAVIDFNSSYSRLIIFSPDSPKIQSIH 673
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,341,826
Number of Sequences: 5004
Number of extensions: 50588
Number of successful extensions: 161
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 221892220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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