Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_M12
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78417-2|CAB01692.1| 258|Caenorhabditis elegans Hypothetical pr... 134 7e-32
Z78417-1|CAB01684.1| 255|Caenorhabditis elegans Hypothetical pr... 134 7e-32
Z72508-4|CAA96637.2| 216|Caenorhabditis elegans Hypothetical pr... 99 3e-21
AC006794-3|AAK68503.2| 192|Caenorhabditis elegans Hypothetical ... 30 1.3
AC006615-4|AAK68233.2| 602|Caenorhabditis elegans Hypothetical ... 30 1.7
Z66524-5|CAC70104.1| 566|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical p... 29 3.9
U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical pr... 28 5.1
U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical p... 28 5.1
AC093703-5|AAL00865.1| 725|Caenorhabditis elegans Hypothetical ... 28 5.1
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF016676-5|AAG24100.1| 473|Caenorhabditis elegans Cytochrome p4... 28 6.8
>Z78417-2|CAB01692.1| 258|Caenorhabditis elegans Hypothetical
protein C35C5.3b protein.
Length = 258
Score = 134 bits (323), Expect = 7e-32
Identities = 57/139 (41%), Positives = 88/139 (63%)
Frame = -2
Query: 419 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 240
T+ I+YC SCGYK+ F+ + ++KYP + + GAN+ P + Y+++ + F KM V++
Sbjct: 97 TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 156
Query: 239 ILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANMIEGQLISSGAFEISLNNIPLW 60
+L G+N F P NK+ +CM++F L N++E LIS+GAFE+ L N +W
Sbjct: 157 VLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIW 216
Query: 59 SKIETGRIPQPXELFQIID 3
SKIE+GR+P P E Q+ID
Sbjct: 217 SKIESGRVPSPQEFMQLID 235
>Z78417-1|CAB01684.1| 255|Caenorhabditis elegans Hypothetical
protein C35C5.3a protein.
Length = 255
Score = 134 bits (323), Expect = 7e-32
Identities = 57/139 (41%), Positives = 88/139 (63%)
Frame = -2
Query: 419 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 240
T+ I+YC SCGYK+ F+ + ++KYP + + GAN+ P + Y+++ + F KM V++
Sbjct: 94 TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 153
Query: 239 ILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANMIEGQLISSGAFEISLNNIPLW 60
+L G+N F P NK+ +CM++F L N++E LIS+GAFE+ L N +W
Sbjct: 154 VLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIW 213
Query: 59 SKIETGRIPQPXELFQIID 3
SKIE+GR+P P E Q+ID
Sbjct: 214 SKIESGRVPSPQEFMQLID 232
>Z72508-4|CAA96637.2| 216|Caenorhabditis elegans Hypothetical
protein F28H7.4 protein.
Length = 216
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Frame = -2
Query: 482 THINADSDEGSISKIGTSVG-HTMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYD 306
T +N +S + G S + I YC SCGYK+ F + ++KYP + + G N+
Sbjct: 49 TVVNENSHSQDVVDSGFSKDLPKLTILYCVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFS 108
Query: 305 PPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLAN 126
P + L++I+G K+ +I +++G N F ++ P N+ +++F + N
Sbjct: 109 PDFWKGCLAQIVGVAKIGLIAIVITGSNPFEYIGFGYPQILQTAHYNRFSYSLLVFMIGN 168
Query: 125 MIEGQLISSGAFEISLNNIPLWSKIETGRIPQPXELFQIID 3
+ E L S+GAFEI L + +WSKI R+P E +ID
Sbjct: 169 LFESTLSSTGAFEIFLGDKQIWSKISKERVPTQEEFLNLID 209
>AC006794-3|AAK68503.2| 192|Caenorhabditis elegans Hypothetical
protein Y50D4A.2 protein.
Length = 192
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 315 SSNDRNLWVFLLYNSCIVFKYLFVATRITVIDIHCMPDT 431
S N RNL + + + F LF+ ++ I +C+PDT
Sbjct: 99 SENSRNLKIDTVVKVFMQFSALFLLRHVSAITAYCIPDT 137
>AC006615-4|AAK68233.2| 602|Caenorhabditis elegans Hypothetical
protein C36B7.6 protein.
Length = 602
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 251 VIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANM 123
V+ +L G +++ + Q W+SW L N LY ++MF M
Sbjct: 452 VLFPLLVGYAVYSIIYVEQRGWYSWVL-NMLYGYLLMFGFITM 493
>Z66524-5|CAC70104.1| 566|Caenorhabditis elegans Hypothetical
protein T13H5.8 protein.
Length = 566
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -2
Query: 281 SRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLE---NKLYACMMMFFLANMIEGQ 111
S+ + + +L++ ++ G I++ L P +W SW LE N +YA +F L +
Sbjct: 399 SQAMKYLSILLVPLVIGGA-IYSLLYVPHKSWRSWILETSANGVYAFGFLFMLPQLFVNY 457
Query: 110 LISSGA 93
+ S A
Sbjct: 458 KLKSVA 463
>Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical
protein Y57G11C.32 protein.
Length = 795
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -2
Query: 608 PLRKQRSSPIYXLNSVRKDISMSNNMFYLNAMLLVCTLLFTLTHINADSDE 456
P + +PI+ + ++ D+SM N++ + L+ + F + + +SDE
Sbjct: 158 PKTPSKFAPIFTESILQLDVSMQNDLLFFLEQHLISSAEFIFSELPLESDE 208
>U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical
protein K08F11.2 protein.
Length = 886
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 397 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 290
+L A KR K +E N NT+R SL+L ++++ LT
Sbjct: 14 LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49
>U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical
protein K08D10.1 protein.
Length = 895
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 397 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 290
+L A KR K +E N NT+R SL+L ++++ LT
Sbjct: 14 LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49
>AC093703-5|AAL00865.1| 725|Caenorhabditis elegans Hypothetical
protein Y20F4.5 protein.
Length = 725
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 397 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 290
+L A KR K +E N NT+R SL+L ++++ LT
Sbjct: 14 LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 194 PAWWSWCLENKL-YACMMMFFLANMIEGQLI 105
P WW+WC + L YA M L ++ LI
Sbjct: 1230 PGWWAWCRDRNLEYALKWMTALLSIFGISLI 1260
>AF016676-5|AAG24100.1| 473|Caenorhabditis elegans Cytochrome p450
family protein 33C7 protein.
Length = 473
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 43 PVSILDQSGMLLRDISKAPEDIS---CPSIIFAKKNIIMHAYSLFSRHQLH 186
P +D+SG L++ P I CP A+ + + + F+R+Q+H
Sbjct: 413 PERFIDESGKLIKVDELVPFSIGKRQCPGEGLARMELFLFIANFFNRYQVH 463
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,506,147
Number of Sequences: 27780
Number of extensions: 337160
Number of successful extensions: 837
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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