Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_M11
         (339 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015968-1|AAH15968.1|   79|Homo sapiens chromosome 11 open read...   103   1e-22
BC002750-1|AAH02750.1|   79|Homo sapiens chromosome 11 open read...   103   1e-22
AF086763-1|AAF28401.1|   79|Homo sapiens C11orf10 protein.            103   1e-22
BC071780-1|AAH71780.1|  146|Homo sapiens SRSR846 protein.              28   8.5  
AY360464-1|AAQ62968.1|  286|Homo sapiens hypothetical protein LO...    28   8.5  
AY358607-1|AAQ88970.1|  146|Homo sapiens SRSR846 protein.              28   8.5  

>BC015968-1|AAH15968.1|   79|Homo sapiens chromosome 11 open reading
           frame 10 protein.
          Length = 79

 Score =  103 bits (248), Expect = 1e-22
 Identities = 47/74 (63%), Positives = 57/74 (77%)
 Frame = -1

Query: 243 LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXTAWFFVYEVTSTKASRDMFKELLLSLVA 64
           +E+E+M RYTSP+NPAVFPH            TAWFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1   MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60

Query: 63  ALFAGFGILCLLXW 22
           +LF GFG+L LL W
Sbjct: 61  SLFMGFGVLFLLLW 74


>BC002750-1|AAH02750.1|   79|Homo sapiens chromosome 11 open reading
           frame 10 protein.
          Length = 79

 Score =  103 bits (248), Expect = 1e-22
 Identities = 47/74 (63%), Positives = 57/74 (77%)
 Frame = -1

Query: 243 LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXTAWFFVYEVTSTKASRDMFKELLLSLVA 64
           +E+E+M RYTSP+NPAVFPH            TAWFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1   MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60

Query: 63  ALFAGFGILCLLXW 22
           +LF GFG+L LL W
Sbjct: 61  SLFMGFGVLFLLLW 74


>AF086763-1|AAF28401.1|   79|Homo sapiens C11orf10 protein.
          Length = 79

 Score =  103 bits (248), Expect = 1e-22
 Identities = 47/74 (63%), Positives = 57/74 (77%)
 Frame = -1

Query: 243 LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXTAWFFVYEVTSTKASRDMFKELLLSLVA 64
           +E+E+M RYTSP+NPAVFPH            TAWFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1   MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60

Query: 63  ALFAGFGILCLLXW 22
           +LF GFG+L LL W
Sbjct: 61  SLFMGFGVLFLLLW 74


>BC071780-1|AAH71780.1|  146|Homo sapiens SRSR846 protein.
          Length = 146

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -1

Query: 84  LLLSLVAALFAGFGILCLLXWGR 16
           LLL LVAAL  G  +LCL  W R
Sbjct: 56  LLLVLVAALLCGAVVLCLQCWLR 78


>AY360464-1|AAQ62968.1|  286|Homo sapiens hypothetical protein
           LOC146177-like protein protein.
          Length = 286

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/33 (36%), Positives = 23/33 (69%)
 Frame = -3

Query: 106 LKRYVQRVTFIIGGRLICWFRDFVLVAMGKGLM 8
           L+RYVQR+ +++ G ++C  R +   +M +G+M
Sbjct: 12  LRRYVQRLQWLLSGPVLC-SRTWYRQSMDRGVM 43


>AY358607-1|AAQ88970.1|  146|Homo sapiens SRSR846 protein.
          Length = 146

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -1

Query: 84  LLLSLVAALFAGFGILCLLXWGR 16
           LLL LVAAL  G  +LCL  W R
Sbjct: 56  LLLVLVAALLCGAVVLCLQCWLR 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,970,880
Number of Sequences: 237096
Number of extensions: 773945
Number of successful extensions: 1745
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1745
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)