Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_M11
         (339 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   0.43 
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   2.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   3.1  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   3.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   3.1  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   5.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   5.4  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   5.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   7.1  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.2 bits (50), Expect = 0.43
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 143 AVKNIPIPSNKKVRCGKTAGFIGDVYRIIDSISRLIF 253
           A K I   +NKK   G +  F   VY++ID+I + I+
Sbjct: 541 ATKQIKDEANKK---GVSLRFYNVVYKLIDNIKKEIY 574


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 127 VNEEPGREEYSYSEQQKG*MWKNCRVY 207
           + E   RE YS S +++   +KN R Y
Sbjct: 263 LEERTSRERYSRSREREQKSYKNEREY 289


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 76  IIGGRLICWFRDFVL 32
           ++GG + CW   F+L
Sbjct: 311 VVGGFVACWLPFFIL 325


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
          protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 76 IIGGRLICWFRDFVL 32
          I+GG ++CW   F +
Sbjct: 14 IVGGFILCWLPFFTM 28


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 76  IIGGRLICWFRDFVL 32
           I+GG ++CW   F +
Sbjct: 462 IVGGFILCWLPFFTM 476


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 210 ATCTGSLIQFRDSFLWLF*NE 272
           A C  + +Q  D   WLF +E
Sbjct: 231 AQCEATTMQENDKMSWLFESE 251


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 276 VFRSKIAIKMSLEIESMIRY 217
           +FR  + I+   EI+ ++RY
Sbjct: 463 LFRINLGIECGYEIKKLLRY 482


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -1

Query: 81  LLSLVAALFAGFGILCLL 28
           L+ ++   ++ FGI+CL+
Sbjct: 278 LVGIIIMWYSPFGIMCLI 295


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 76  IIGGRLICWFRDFVLVAMGKGLMC 5
           ++ G L+C+   F LV     ++C
Sbjct: 698 LLSGILLCYLVTFALVLRPTDIVC 721


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,158
Number of Sequences: 438
Number of extensions: 1550
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)