Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_M09
(639 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 23 2.1
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 23 2.1
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 23 2.1
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 2.8
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 23 2.8
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 22 3.8
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 22 3.8
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 22 5.0
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 22 5.0
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 8.7
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 8.7
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 450 NVEALPAVTVPFSFWN 497
N +ALP +T P S WN
Sbjct: 38 NNQALPPITYPPSDWN 53
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 51 APPPPLQIEATP 86
+PPPP QI A P
Sbjct: 329 SPPPPYQISAQP 340
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 450 NVEALPAVTVPFSFWN 497
N +ALP +T P S WN
Sbjct: 29 NNQALPPITYPPSDWN 44
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 22.6 bits (46), Expect = 2.8
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 255 SHNATSSFLTPVFSNNLGMATAGAIGKSMGSHSPSA 362
S A SS + NN G A A + GK SH +A
Sbjct: 958 SLGALSSMFDSLSGNNTGDALAPSGGKKGSSHPLAA 993
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 39 ITDDAPPPPLQIEATPFS 92
I +++PPP Q ATP S
Sbjct: 6 IYEESPPPAPQSAATPIS 23
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 22.2 bits (45), Expect = 3.8
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -3
Query: 610 DELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVT--AGNAS 455
DE+ P PVP P E E + E+ T+ ST QK T T +GN S
Sbjct: 389 DEIPPEPVPTPEPQPTQTTESEPTQA--SEQPTESSTT-QKPQTTKTPESGNES 439
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 527 INSFILFIFSKYYRSPSFLWNGYRYKFINKSFSFI 631
+NS L + + S ++N ++ +NK+F FI
Sbjct: 22 VNSIFLVMSAVTIILSSLIFNQEQWSSLNKNFQFI 56
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.8 bits (44), Expect = 5.0
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 485 FLLEYRRQFCKLFKINSFILFIFSKYYRSPSFLWNGYRYKFINKSFSFIS 634
F LEY++ + + I SF+L FS R P L FI + F+S
Sbjct: 135 FRLEYKQLLKRSYLIISFVL--FSLLARVPVMLMT-ISADFIQQIMLFVS 181
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 21.8 bits (44), Expect = 5.0
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 485 FLLEYRRQFCKLFKINSFILFIFSKYYRSPSFLWNGYRYKFINKSFSFIS 634
F LEY++ + + I SF+L FS R P L FI + F+S
Sbjct: 135 FRLEYKQLLKRSYLIISFVL--FSLLARVPVMLMT-ISADFIQQIMLFVS 181
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3
Query: 529 NFEKFTKLSTVFQKENGTVTAGNAS 455
N + K FQ++ VT GN S
Sbjct: 509 NVDNSAKFKDGFQEQPNVVTVGNPS 533
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/25 (28%), Positives = 12/25 (48%)
Frame = +3
Query: 510 FVNFSKLTLLYSSSSANITGAPLFC 584
+ N+S L Y+S + P+ C
Sbjct: 1170 YTNYSMEVLAYTSGGDGVRTTPIHC 1194
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,760
Number of Sequences: 336
Number of extensions: 3113
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -