Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_M08
         (396 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    25   0.31 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   6.8  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    20   9.0  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    20   9.0  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    20   9.0  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   9.0  

>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 247 VSMGLGAGTRCEPVGT 294
           V++G  AG  C+PVGT
Sbjct: 282 VAIGTAAGMMCQPVGT 297


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +1

Query: 274 RCEPVGTTTTIERYAAGTAPGVARLHYRLPARDSSAGRIHL 396
           R +P       +R+A+G       LH+   +R+SS  + ++
Sbjct: 416 RYQPAFRCKPSQRFASGRYYSAYSLHHVRSSRESSCEQTYI 456


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 214 RCLTTRGRCSSE 179
           +CL   GRC++E
Sbjct: 49  KCLMDEGRCTAE 60


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 214 RCLTTRGRCSSE 179
           +CL   GRC++E
Sbjct: 49  KCLMDEGRCTAE 60


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 214 RCLTTRGRCSSE 179
           +CL   GRC++E
Sbjct: 49  KCLMDEGRCTAE 60


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 76  HSGSVTWPQRDRAAFL 123
           H GS +W Q D  A L
Sbjct: 405 HHGSKSWTQEDMDAAL 420


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,197
Number of Sequences: 438
Number of extensions: 1750
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)