Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_M01
(634 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1038 - 29879965-29880492 58 4e-09
07_03_1338 - 25877235-25877738 58 8e-09
05_07_0049 - 27327804-27328400 56 2e-08
02_01_0745 - 5550472-5551053 54 9e-08
05_07_0157 - 28079181-28079720 46 3e-05
05_01_0488 - 4070506-4072277,4072455-4072557 30 1.8
02_04_0534 + 23725051-23726253 29 3.1
06_01_1138 - 9429447-9433868 28 7.1
08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895 27 9.4
05_05_0046 - 21834942-21835055,21835145-21835220,21835297-218355... 27 9.4
04_03_0541 - 16934460-16934573,16934663-16934738,16934815-169350... 27 9.4
02_05_0443 - 29057427-29057769,29058086-29058147,29070863-29071132 27 9.4
02_04_0664 + 24826714-24826842,24826912-24826947,24827551-248276... 27 9.4
02_04_0533 + 23719353-23719910,23720012-23720418,23720690-23721023 27 9.4
01_06_1351 - 36510599-36510712,36510802-36510877,36510954-365112... 27 9.4
>03_05_1038 - 29879965-29880492
Length = 175
Score = 58.4 bits (135), Expect = 4e-09
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Frame = -1
Query: 451 SPKIEKIVFEITNLNLLEVSELSQVLKKRLN---LPDXXXXXXXXXXXXXXXXXXXXXXX 281
+P++ +V EI L L+E S L+ L+ RL LP
Sbjct: 38 TPRVSALVDEICGLTLIEASSLTDALRGRLGVDQLPPLAILTGGAAPLAGGGAATGAAGE 97
Query: 280 XXXXKT---SFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTVVKADISKD 110
K +F VK+ FD K+ +IKE++ L +AK+ VE P V+KA + K+
Sbjct: 98 EAKAKEEKMAFDVKLEGFDAAAKLKIIKELRAFTN-LGLKEAKELVEKAPAVLKAGVPKE 156
Query: 109 EAEKLKEALTKVGAIIEIE 53
EAE + E + +GA I +E
Sbjct: 157 EAESIAEKMRAIGAKIVLE 175
>07_03_1338 - 25877235-25877738
Length = 167
Score = 57.6 bits (133), Expect = 8e-09
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Frame = -1
Query: 448 PKIEKIVFEITNLNLLEVSELSQVLKKRLNLP---DXXXXXXXXXXXXXXXXXXXXXXXX 278
PK+ +I ++ L+ E+ + S +L+ +L L
Sbjct: 34 PKLSRIADQLLELSPAELDDYSALLRLKLRLSLTSSAASGAAATGAAGDAASGSAGAEEA 93
Query: 277 XXXKTSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTVVKADISKDEAEK 98
KTSF VK+ K++ K+ +IKEV+ + + L +AK+ VE P VV++ + K+EAE
Sbjct: 94 AAVKTSFDVKIEKYEAAAKIKIIKEVRAVTD-LGLKEAKELVEKAPVVVRSGLPKEEAEA 152
Query: 97 LKEALTKVGAIIEIE 53
L L GA + +E
Sbjct: 153 LAAKLKAAGAAVALE 167
>05_07_0049 - 27327804-27328400
Length = 198
Score = 56.0 bits (129), Expect = 2e-08
Identities = 45/193 (23%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Frame = -1
Query: 595 RNMNGIRIIKNVNLQWRSLSRCSVLRQ-EVTQTVTPLTIPV--PEGVDKPV-SPKIEKIV 428
R+ + +R++++ +L W S S + +V + T P +P S ++ ++V
Sbjct: 7 RSGHRLRLLRHGSLSWASFSAAAAEELIDVRKLPTDYDASTFDPTAPSRPPPSDRVWRLV 66
Query: 427 FEITNLNLLEVSELSQVLKKRLNLP--------DXXXXXXXXXXXXXXXXXXXXXXXXXX 272
++++L L E + LS +L +RL++P
Sbjct: 67 EDVSSLTLAESAALSALLLRRLDVPAPPIAILNSAAGLGGGGGAGAAGAAGEKAGGAAAA 126
Query: 271 XKTSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTVVKADISKDEAEKLK 92
KT F +++ FD K+ +IKE++ + L +AK+ VE P V+K +SK+EA +
Sbjct: 127 EKTVFELRLEAFDAASKIKVIKEIRSFTD-LGLKEAKELVEKAPAVIKGGVSKEEARTII 185
Query: 91 EALTKVGAIIEIE 53
+ + VGA + ++
Sbjct: 186 DKMKAVGAKVVMD 198
>02_01_0745 - 5550472-5551053
Length = 193
Score = 54.0 bits (124), Expect = 9e-08
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 4/145 (2%)
Frame = -1
Query: 475 PEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLNLPDXXXXXXXXXXXXXXXXXX 296
P G P S K+ + I L E+ +++ L RLN P
Sbjct: 50 PYGPMSPPSQKVVDLADRIAALPPEEIKQIAPALLLRLNQPPPQAISGQGFSFSPQGGGG 109
Query: 295 XXXXXXXXXK----TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTVVK 128
K T F VK+ KFD K+ +IKE++ + L +AK+ VE P ++K
Sbjct: 110 AAGAAKAEEKKAEKTVFDVKLEKFDAAAKIKIIKEIRTFTD-LGLKEAKELVEKAPVILK 168
Query: 127 ADISKDEAEKLKEALTKVGAIIEIE 53
++K+EAE + E + G + +E
Sbjct: 169 QSLTKEEAEAIIEKIKVAGGVAVME 193
>05_07_0157 - 28079181-28079720
Length = 179
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = -1
Query: 265 TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTVVKADISKDEAEKLKEA 86
T F V + + ++A IK V+ L L +AK +E +P K +SK+EAE+ K+
Sbjct: 110 TEFDVVIEEVPSSARIATIKVVRALTN-LALKEAKDLIEGLPKKAKEAVSKEEAEEAKKQ 168
Query: 85 LTKVGAIIEI 56
L +VGA + I
Sbjct: 169 LEEVGAKVSI 178
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/66 (27%), Positives = 41/66 (62%)
Frame = -1
Query: 250 KMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTVVKADISKDEAEKLKEALTKVG 71
++++ ++KQ+V+ + E L + + V+++K E++ VV ++KDE ++LKE++
Sbjct: 215 ELSEHEEKQQVSDV-ETSSLQKDLDEVKSEK--EALEAVVL--VNKDEIDRLKESMVSAA 269
Query: 70 AIIEIE 53
E+E
Sbjct: 270 KQFEVE 275
>02_04_0534 + 23725051-23726253
Length = 400
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 502 TVTPLTIPVPEGVDKPVSPK 443
TV T+P+PEG D PV PK
Sbjct: 99 TVVQETLPLPEGGDHPVPPK 118
>06_01_1138 - 9429447-9433868
Length = 1473
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 463 DKPVSPKIEKIVFEITNLNLLEVSELSQVLKK 368
+K +PK++KIV +TN+N L E LK+
Sbjct: 1265 EKEAAPKLQKIVLSLTNVNSLSGVEGLPKLKE 1296
>08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895
Length = 227
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 224 LFVIKFRHFNCKTGLHSFRGCLFFINSSRWSHCESAHWHNWSVGQ 358
L +++F H +T F +FF N + + C+ + H + +GQ
Sbjct: 130 LAILEFIHLFVETMDRHFGNVVFFSNPNNYFSCDCKYAHIYHMGQ 174
>05_05_0046 -
21834942-21835055,21835145-21835220,21835297-21835553,
21835643-21835741,21835820-21836018,21836102-21836315,
21836470-21836538,21836626-21836950,21837065-21837235,
21837315-21837479,21837555-21838191,21838258-21838319,
21838581-21838652,21839256-21839291,21839361-21839489
Length = 874
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 430 VFEITNLNLLEVSELSQVLKKRLNLP 353
+FEI N + L++S L ++LKK+ P
Sbjct: 202 IFEIPNFSHLKISLLERILKKQYGYP 227
>04_03_0541 -
16934460-16934573,16934663-16934738,16934815-16935071,
16935161-16935259,16935338-16935536,16935620-16935833,
16935988-16936056,16936144-16936468,16936583-16936753,
16936833-16936997,16937073-16937709,16937776-16937837,
16938098-16938169,16938689-16938724,16938794-16938922
Length = 874
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 430 VFEITNLNLLEVSELSQVLKKRLNLP 353
+FEI N + L++S L ++LKK+ P
Sbjct: 202 IFEIPNFSHLKISLLERILKKQYGYP 227
>02_05_0443 - 29057427-29057769,29058086-29058147,29070863-29071132
Length = 224
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 430 VFEITNLNLLEVSELSQVLKKRLNLP 353
+FEI N + L++S L ++LKK+ P
Sbjct: 180 IFEIPNFSHLKISLLERILKKQYGYP 205
>02_04_0664 +
24826714-24826842,24826912-24826947,24827551-24827622,
24827882-24827943,24828010-24828646,24828722-24828886,
24828966-24829136,24829251-24829575,24829663-24829731,
24829886-24830099,24830183-24830381,24830460-24830558,
24830648-24830904,24830981-24831056,24831146-24831259
Length = 874
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 430 VFEITNLNLLEVSELSQVLKKRLNLP 353
+FEI N + L++S L ++LKK+ P
Sbjct: 202 IFEIPNFSHLKISLLERILKKQYGYP 227
>02_04_0533 + 23719353-23719910,23720012-23720418,23720690-23721023
Length = 432
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1
Query: 484 IPVPEGVDKPVSPK 443
+P+PEG D PVSPK
Sbjct: 104 LPLPEGSDHPVSPK 117
>01_06_1351 -
36510599-36510712,36510802-36510877,36510954-36511210,
36511300-36511398,36511477-36511675,36511759-36511972,
36512127-36512195,36512283-36512607,36512722-36512892,
36512972-36513136,36513212-36513848,36513915-36513976,
36514237-36514308,36514912-36514947,36515017-36515145
Length = 874
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 430 VFEITNLNLLEVSELSQVLKKRLNLP 353
+FEI N + L++S L ++LKK+ P
Sbjct: 202 IFEIPNFSHLKISLLERILKKQYGYP 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,925,325
Number of Sequences: 37544
Number of extensions: 222035
Number of successful extensions: 634
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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