Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_L22
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.8  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   2.3  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.2  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   7.2  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +2

Query: 68  ELIDMLHFLHKHLQKFTFQNINRKLKRNITLVSEFYCNMLVTTLKLQSA 214
           EL +  +F+ +HL KF+  N     +  I  V    C  L+  ++ +++
Sbjct: 305 ELYEFSNFVSQHLPKFSAANFFDIERSTILSVLGTACTFLIIIVQFRNS 353


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 438 LLFLVNFKCT*M*SNSMYTVCYNLIDCNAVLKT 340
           LLF V    + +  NS YT  Y+ +D + ++K+
Sbjct: 7   LLFFVIAIASSLAENSKYTTKYDNVDLDEIIKS 39


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 564 REQNICFIVMKTESSQNNNPQIEWRIPYI 650
           ++ N    ++KT S++N+   I W  P++
Sbjct: 373 QQWNSLIKILKTVSNRNDKGDIFWFSPFL 401


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +2

Query: 74  IDMLHFL--HKHLQKFTFQNINRKLKRNITLVSE 169
           I+M H L   +   K  FQN   KLK+ I  + E
Sbjct: 254 IEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKE 287


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -1

Query: 556 KLFGMSSEELNLVRKWYHN*NSDISLFE*KKGYIQYL 446
           KL     +E NL +  Y      IS++    GY QY+
Sbjct: 118 KLKTRDQKERNLFKNAYFQLVLSISVYSSSVGYTQYV 154


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +2

Query: 164 SEFYCNMLVTTLKLQSANL*CYSYRRKTSQTILIISMNIHILPYNFY 304
           SEF   +L   +KLQS  L      +KT   I +    + ++ Y  +
Sbjct: 747 SEFMTKLLEFDVKLQSDRLMIDYKTQKTGSKIHLFVKCVFLMGYQIF 793


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 649 SASRHRIVHSPI 684
           SASRH + H P+
Sbjct: 155 SASRHHVDHQPV 166


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +2

Query: 74  IDMLHFL--HKHLQKFTFQNINRKLKRNITLVSE 169
           I+M H L   +   K  FQN   KLK+ I  + E
Sbjct: 36  IEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKE 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,077
Number of Sequences: 336
Number of extensions: 3266
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)