Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_L20
(829 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0995 - 13071930-13072007,13072708-13072999,13073096-130732... 33 0.21
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 33 0.28
08_02_0531 + 18256597-18256836,18257637-18257735,18258038-182581... 33 0.37
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 31 0.85
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 31 1.1
09_05_0005 + 20026190-20026343,20026483-20026682,20026918-200273... 31 1.1
03_05_1143 + 30709825-30709926,30710105-30710260,30710356-307104... 31 1.1
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 30 2.0
02_04_0115 - 19888252-19888406,19888507-19888573,19888867-198891... 30 2.6
03_05_0109 - 20903013-20903062,20903406-20903538,20903631-209037... 29 4.5
05_03_0376 - 13252220-13252354,13252433-13252541,13253279-132533... 29 6.0
10_08_0789 + 20569738-20570207,20573425-20573464,20573484-205735... 28 7.9
08_01_0343 - 3025577-3025810,3026428-3026505,3026630-3026748,302... 28 7.9
>03_02_0995 -
13071930-13072007,13072708-13072999,13073096-13073226,
13073564-13074466,13074545-13074631,13075141-13075224,
13075355-13075408,13075903-13076034,13076164-13076259,
13076508-13076777,13078711-13078800,13079942-13080008,
13080150-13080241,13080359-13080487
Length = 834
Score = 33.5 bits (73), Expect = 0.21
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Frame = -2
Query: 654 VKNDLSQIENITSKLE-KTL-TDDNVKLYNATNTIADENRKTNDLLEKMLRILSYRPKII 481
++ +L Q+E +++KL+ KT+ + V+ +AT +A E L + S+ K+
Sbjct: 42 LQRNLDQLEVLSTKLKAKTVRAEAPVQSLSATRLLAREGINAEQLARDLK---SFELKLH 98
Query: 480 TTNPTIVKGNATYENLLSYVNEIKQNIEDRW-KDRQNVLNDLQNDIAQLHSRIEVLAMTE 304
A +NL S+ N + Q +ED W K++++ L L ++ L R L M
Sbjct: 99 EMAIVSSIQEAQKDNLRSFNNYMMQVLEDDWQKEKRDFLQSLSR-LSTLPKRNTNL-MAS 156
Query: 303 EPRHERLSKAQDSSPATNSGSMFTEV 226
L + SSP ++SG EV
Sbjct: 157 GISRPALMPSSASSPQSSSGLPSKEV 182
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/119 (22%), Positives = 57/119 (47%)
Frame = -2
Query: 642 LSQIENITSKLEKTLTDDNVKLYNATNTIADENRKTNDLLEKMLRILSYRPKIITTNPTI 463
++QIE I+ + + L + NV L N+++D N + L K+ + + + N +
Sbjct: 491 VAQIEAISQTMAE-LFEKNVFL---ENSLSDANAELESLRGKLKELEESSEALYSQNSAL 546
Query: 462 VKGNATYENLLSYVNEIKQNIEDRWKDRQNVLNDLQNDIAQLHSRIEVLAMTEEPRHER 286
+T + +++ QN+E + + + +DLQ + + EV+ + E+ R ER
Sbjct: 547 QHEKSTLACQVDRISDTLQNLEAHYAELEKRHSDLQEEKGSVLD--EVIKLQEQIRFER 603
>08_02_0531 +
18256597-18256836,18257637-18257735,18258038-18258184,
18258295-18258427,18258521-18258585,18258792-18258962,
18259095-18259199,18259495-18259602,18259792-18260088,
18260191-18260256,18260477-18260679,18261178-18261232,
18261318-18261503,18261701-18261985
Length = 719
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = -2
Query: 639 SQIENITSKLEKTLTDDNVKLYNATNTIADENRKTNDLLEKMLRILSYRPKIITTN 472
+ +EN +L+K L+D++ K + DE+ K N+LL++ L L+ + I+TN
Sbjct: 178 ASLENEIKQLKKQLSDNSEKETETKRRLEDEH-KRNELLQQQLNELNVSKERISTN 232
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 31.5 bits (68), Expect = 0.85
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 14/154 (9%)
Frame = -2
Query: 699 ENLPMNNRNDNISVTVKN---DLSQI---------ENITSKLEKTLTDDNVKLYNA--TN 562
ENL ++ NDN+ +N + SQ+ EN T EK L + +KL +
Sbjct: 345 ENLMLSRENDNLKACEQNLGTECSQLKATIAETKAENSTLTEEKHLLESKLKLLGVEIDD 404
Query: 561 TIADENRKTNDLLEKMLRILSYRPKIITTNPTIVKGNATYENLLSYVNEIKQNIEDRWKD 382
IA++ N + + + +++ + + ++ + + ++ D+
Sbjct: 405 LIAEKEELMNSMNIERGAAAEEKEMLVSKHSKCLTELEKAQSSVKELESTNGDLNDKIAV 464
Query: 381 RQNVLNDLQNDIAQLHSRIEVLAMTEEPRHERLS 280
QN N L +++ QL + E L E ER+S
Sbjct: 465 LQNEKNSLSSELQQLEASFENLGNDLEQELERIS 498
>10_08_0043 - 14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/161 (18%), Positives = 73/161 (45%), Gaps = 4/161 (2%)
Frame = -2
Query: 687 MNNRNDNISVTVKNDLSQIENITSKLEKTLTDDNVKLYNATNT-IADENRKTNDLLEKML 511
++ +N N+ + + + ++IEN+ +KL T +++ + + A N+ ++DE LE +
Sbjct: 990 ISEKNSNLDILISDMKAEIENLRTKL--TDSEETCQAHLANNSALSDEKNNVFSQLESVT 1047
Query: 510 RIL-SYRPKIITTNPTIVKGNATYENLLSY--VNEIKQNIEDRWKDRQNVLNDLQNDIAQ 340
++ + K + + E L+Y V E++ + + ++ + + Q +
Sbjct: 1048 VVMKALESKHADLEDK--SSSLSREMNLAYDQVRELQDQLRVKDEEYEAFVKSHQTQVND 1105
Query: 339 LHSRIEVLAMTEEPRHERLSKAQDSSPATNSGSMFTEVCVA 217
+I L +E L + Q++ + + + E C+A
Sbjct: 1106 FEEQISSLQKKSYYMNELLEQEQENHMSASINVVILENCLA 1146
>09_05_0005 +
20026190-20026343,20026483-20026682,20026918-20027309,
20027646-20027778,20027858-20027942,20028216-20028235
Length = 327
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = -2
Query: 579 LYNATNTIADENRKTNDLLEKMLRILSYRPKIITTNPTIVKGNATYENLLSYVNEIKQNI 400
L N + + R+ N LE ++L + +I + + T+ LL+ NE+K I
Sbjct: 251 LCNRRSAARSKERRLNYKLELESKVLVLKIEIEKLSEKLATAQRTFNELLAQNNELKIKI 310
Query: 399 EDRWKDRQ 376
++ ++RQ
Sbjct: 311 QETGRERQ 318
>03_05_1143 + 30709825-30709926,30710105-30710260,30710356-30710439,
30710769-30710882,30711019-30711111,30711888-30711977,
30712157-30712227,30712300-30712374,30712481-30712568,
30712748-30712806,30712893-30712956,30713030-30713095,
30713283-30713435,30713522-30713626,30713739-30713974,
30714104-30714173,30714286-30714339,30714501-30714557,
30714662-30714741,30716056-30717919
Length = 1226
Score = 31.1 bits (67), Expect = 1.1
Identities = 31/151 (20%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Frame = -2
Query: 807 NVNRRTEVIGATDRRTIYGEXNXMLMKIRDILLKFTENLPMNNRNDNISVTVKNDLSQIE 628
N + +E++ + + RT + L K R+ L+ + + NR+D+I + + S++E
Sbjct: 1039 NFGKASELLRSEEERT---KLLSELKKSREQLIMVQKEIKSMNRHDDIDCKIASLESEVE 1095
Query: 627 NITSKLEKTLTDDNVKLYNATNTIAD---ENRKTNDLL-----EKMLRILSYRPKIITTN 472
N TL + +V+ + NT+ + E +K D L E + ++ KI
Sbjct: 1096 NCC----LTLLEADVEKFVRDNTLTEIWKEEQKDMDCLLVDYQECVFKVNLKEEKIRACE 1151
Query: 471 PTIVKGNATYENLLSYVNEIKQNIEDRWKDR 379
++ + +++ S +N+ +++ + +DR
Sbjct: 1152 ESLQHQTRSLDDMNSKLNQAMRDLGEHLRDR 1182
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/90 (22%), Positives = 44/90 (48%)
Frame = -2
Query: 651 KNDLSQIENITSKLEKTLTDDNVKLYNATNTIADENRKTNDLLEKMLRILSYRPKIITTN 472
+ ++ + + +L + + D N K + T+ R L+EK L+ R + TTN
Sbjct: 1083 RREVGEAQQRVEELLRLVADANGKSTSLQTTV---QRLEQSLIEKEATWLTERQESETTN 1139
Query: 471 PTIVKGNATYENLLSYVNEIKQNIEDRWKD 382
+++ + E LL+ + E+ +N +++D
Sbjct: 1140 KLLIEAHGRNEELLNKI-EVAENDISKFRD 1168
>02_04_0115 -
19888252-19888406,19888507-19888573,19888867-19889101,
19889179-19889255,19889350-19889415,19889517-19889565,
19889651-19889701,19889799-19889851,19889973-19890024,
19890126-19890214,19890308-19890393,19890603-19890659,
19890742-19890919,19891852-19891908,19892209-19892439
Length = 500
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/59 (25%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 438 NLLSYVNEIKQNIEDR--WKDRQNVLNDLQNDIAQLHSRIEVLAMTEEPRHERLSKAQD 268
N+L + I++ +++R WK + +L N ++ L + +E L++ E+ ER+S ++
Sbjct: 214 NVLEGIGLIEKTLKNRIRWKGLDDSGVELDNGLSALQAEVENLSLKEQALDERISDMRE 272
>03_05_0109 -
20903013-20903062,20903406-20903538,20903631-20903726,
20904011-20904168,20904278-20904392,20904486-20904539,
20904818-20904925,20905406-20905495,20905907-20906086,
20906204-20906516,20906619-20906794
Length = 490
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = -2
Query: 423 VNEIKQNIEDRWKDRQNVLNDLQNDIAQLHSRIEVLAMTEEPRHERLSK 277
V+E+++ ++ + K+R ++ D +A L S +E EPR ++ +
Sbjct: 346 VHEMEERVKAKEKERDQIVADENQKLAALRSEVEWKLKCLEPRERKVEE 394
>05_03_0376 -
13252220-13252354,13252433-13252541,13253279-13253337,
13253608-13253700,13254078-13254153,13254405-13254467,
13254535-13254629,13254743-13254845,13254930-13255024,
13255098-13255156,13255445-13255656,13256090-13256222,
13256691-13257081
Length = 540
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -2
Query: 378 QNVLNDLQNDIAQLHSRIEVLAMTEEPRHERLSKAQDSSPATNSGSM 238
+N + L+NDI QL++++ L E + +S+ + +S + G+M
Sbjct: 139 KNTIKCLKNDIKQLNNKLSELQALLEMKETEISQLRRNSTGVDLGNM 185
>10_08_0789 +
20569738-20570207,20573425-20573464,20573484-20573536,
20573633-20574212,20574323-20575384,20575631-20575813,
20576112-20576199,20576285-20576532,20576712-20577053,
20579026-20579163,20579521-20579547
Length = 1076
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = -2
Query: 714 LLKFTENLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTDDNVKLY--NATNTIADENR 541
L F ++ P N ++ +S +K+ + + SKLE L D N+K Y + I R
Sbjct: 577 LATFRKHFPKNMFSEQVSKRIKSLIKCV----SKLENLLKDRNLKEYDVHVAFGILSGKR 632
Query: 540 KTNDLLEKMLR 508
+T +L K LR
Sbjct: 633 ETISVLAKDLR 643
>08_01_0343 -
3025577-3025810,3026428-3026505,3026630-3026748,
3027566-3027645,3028034-3028107,3028536-3028620,
3028704-3028789,3028968-3029038,3029126-3029207,
3029490-3029531,3029552-3029584,3029699-3029794,
3030163-3030414,3030970-3031149,3032079-3032119,
3032341-3032470,3032504-3032606,3032686-3032773,
3033151-3033304,3033688-3033739,3033815-3033894,
3034478-3034789,3034886-3034955,3035033-3035100,
3035405-3035678,3036408-3036580,3037036-3037128,
3037228-3037443
Length = 1121
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 690 PMNNRNDNISVTVKNDLSQIENITSKLEKTLTDD 589
P+NN+N NI + S IE+ SK+ +L++D
Sbjct: 212 PINNKNPNIWDMEISAFSMIEDALSKIASSLSED 245
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,764,030
Number of Sequences: 37544
Number of extensions: 283280
Number of successful extensions: 727
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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