Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_L20
         (829 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   3.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   4.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   4.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.6  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   8.0  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 438 NLLSYVNEIKQNIEDRWKDRQNVLNDL 358
           N   Y+N ++ N+ +    R+NVL+ L
Sbjct: 430 NRSEYLNHLRANVAEGRNQRKNVLDRL 456


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 15/53 (28%), Positives = 20/53 (37%)
 Frame = -2

Query: 729 KIRDILLKFTENLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTDDNVKLYN 571
           +I + +L     L    RN        NDL   E    K+E +L  D    YN
Sbjct: 542 EIDNWMLDLNSGLNKITRNSLDCFFTMNDLEPSEIFYEKIETSLNSDKPFTYN 594


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 15/53 (28%), Positives = 20/53 (37%)
 Frame = -2

Query: 729 KIRDILLKFTENLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTDDNVKLYN 571
           +I + +L     L    RN        NDL   E    K+E +L  D    YN
Sbjct: 542 EIDNWMLDLNSGLNKITRNSLDCFFTMNDLEPSEIFYEKIETSLNSDKPFTYN 594


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = -2

Query: 633 IENITSKLEKTLTDDNVKLYNATNTIADENRKT 535
           I+NI  +++  +   N  +Y   NT+++ N++T
Sbjct: 359 IQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRT 391


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = -2

Query: 633 IENITSKLEKTLTDDNVKLYNATNTIADENRKT 535
           I+NI  +++  +   N  +Y   NT+++ N++T
Sbjct: 397 IQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRT 429


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = -2

Query: 672 DNISVTVKNDLSQIENITSKLEKTLTDDNVKLYNATNTIADENRKTNDLLEKM 514
           DN+ +  KND    E   S  E  +  DN+ LYN    ++ +N     L+  M
Sbjct: 192 DNL-IPDKNDPDSKE--CSNQEYEIMKDNLLLYNHARLMSQDNHSKEYLVSIM 241


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 720 DILLKFTENL-PMNNRNDNISVTVKNDLSQIENITSK 613
           D+L  +   + P++N ND + V +   LSQ+ ++  K
Sbjct: 27  DLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLK 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,377
Number of Sequences: 438
Number of extensions: 4342
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)