Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_L18
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 204 6e-53
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 204 6e-53
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 204 6e-53
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 31 0.80
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 31 0.80
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 30 1.4
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 30 1.9
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 30 1.9
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 29 2.4
U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like ... 29 3.2
AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to SU... 29 3.2
Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 29 4.3
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 4.3
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 28 7.5
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 27 9.9
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 204 bits (497), Expect = 6e-53
Identities = 88/132 (66%), Positives = 103/132 (78%)
Frame = -2
Query: 704 KXIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFG 525
K IP+FWE FD +N+SIW EYKYPE+L FMSCNLI GM+QRL+K++K AFAS+ LFG
Sbjct: 235 KAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFG 294
Query: 524 EDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDK 345
DNNSTISG+WVW+G +L F LS DWQVDYESY W KLD S+ TKK V +Y W G D
Sbjct: 295 TDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DF 353
Query: 344 DGRKFNQGKIFK 309
G+KFNQGKIFK
Sbjct: 354 GGKKFNQGKIFK 365
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 204 bits (497), Expect = 6e-53
Identities = 88/132 (66%), Positives = 103/132 (78%)
Frame = -2
Query: 704 KXIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFG 525
K IP+FWE FD +N+SIW EYKYPE+L FMSCNLI GM+QRL+K++K AFAS+ LFG
Sbjct: 243 KAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFG 302
Query: 524 EDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDK 345
DNNSTISG+WVW+G +L F LS DWQVDYESY W KLD S+ TKK V +Y W G D
Sbjct: 303 TDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DF 361
Query: 344 DGRKFNQGKIFK 309
G+KFNQGKIFK
Sbjct: 362 GGKKFNQGKIFK 373
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 204 bits (497), Expect = 6e-53
Identities = 88/132 (66%), Positives = 103/132 (78%)
Frame = -2
Query: 704 KXIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFG 525
K IP+FWE FD +N+SIW EYKYPE+L FMSCNLI GM+QRL+K++K AFAS+ LFG
Sbjct: 268 KAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFG 327
Query: 524 EDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDK 345
DNNSTISG+WVW+G +L F LS DWQVDYESY W KLD S+ TKK V +Y W G D
Sbjct: 328 TDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DF 386
Query: 344 DGRKFNQGKIFK 309
G+KFNQGKIFK
Sbjct: 387 GGKKFNQGKIFK 398
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 472 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 582
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 472 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 582
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 464 PLSSDWQVDYESYDWKKL 411
PL D QVD+++Y+W+KL
Sbjct: 2672 PLGPDGQVDFQNYEWQKL 2689
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 469 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 582
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 469 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 582
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 704 KXIPYFWEKFDPENYSIW-YAEYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLF 528
K P + KF PENY +W Y +E ++ ++S + ++ + +RK A+ +
Sbjct: 54 KKFPRKFPKFGPENYKVWCYVNELDKDETSEYYISRTEFSKLYAG-NVVRKVEDATHIVL 112
Query: 527 GEDNNSTIS 501
E+ N +++
Sbjct: 113 PENENGSVT 121
>U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like
protease protein 1 protein.
Length = 697
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 306 NADKRPANVYTFHTITIKNFTKKKHSNVNRW 214
N D + +Y F+T N K +++V RW
Sbjct: 534 NGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564
>AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to
SUMO-1-specific protease protein.
Length = 697
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 306 NADKRPANVYTFHTITIKNFTKKKHSNVNRW 214
N D + +Y F+T N K +++V RW
Sbjct: 534 NGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564
>Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical
protein F58E6.3 protein.
Length = 293
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 373 TTSRGTEPTKTVESSTRARYSSECRQTSSQCIHISYNNYKKLYKKETFKCK*VDVGNFRN 194
T +G K E + + + S+ + CI + N+KK+Y + KCK VGN +
Sbjct: 197 TYQQGANTAKMCEWTNQCKASTHNCHWLAACIDLPDENHKKMY---SCKCKPGFVGNGFH 253
Query: 193 C 191
C
Sbjct: 254 C 254
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 7/105 (6%)
Frame = -3
Query: 565 KCANRLSHPSACLVKTTIPPSPECGCGAERSSCSRCRLIGRWTTSPTTGRNWILRARRP- 389
KC+ + + + +P + CGC A S + CR R T S + G + +
Sbjct: 4 KCSTSTNISNRVCSCSPLPSTSSCGCQASSSCANSCRSTCRPTCSSSGGFGCRMNCQNTC 63
Query: 388 -----RNLSRTTSRGTEPTKTVESSTRARYSSECRQ-TSSQCIHI 272
+ + T+S K S RA C +SQC ++
Sbjct: 64 VNACNKQFAPTSSSSIVQIKNQPSVIRAVAGKSCLSGCNSQCSNV 108
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -3
Query: 370 TSRGTEPTKTVESSTRARYSSECRQTSSQCIHISYNNYKKLYKKETFKCK 221
T + TE T TVE++ R ++Q SYN K KK KCK
Sbjct: 334 TKKVTEETTTVETTERQNVDDTTENQTTQTTSSSYN--AKEEKKSYRKCK 381
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.7 bits (61), Expect = 4.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 496 CGCGAERSSCSRCRLIGRWTTSPTTG 419
C C + + CRL+ W+ TTG
Sbjct: 696 CSCNGDTTESENCRLLSSWSEWTTTG 721
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 532 CLVKTTIPPSPECGCGAERSS 470
C + PP P+CGCG ++ S
Sbjct: 63 CGIPPPPPPPPQCGCGRKKRS 83
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -2
Query: 452 DWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK*MPT 297
D+ VD ++D D S E + ++ + WN T R+ GK +PT
Sbjct: 340 DYYVDLVTHDNLTSDASRESSVRIARLVNKWNQTAPPVRRTASGKFLLDLPT 391
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,227,762
Number of Sequences: 27780
Number of extensions: 387603
Number of successful extensions: 1335
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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