Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_L15
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 129 1e-30
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 33 0.23
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical pr... 30 1.6
U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2 prot... 30 1.6
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 30 1.6
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 29 2.1
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 29 2.1
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 29 2.1
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 29 2.1
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 28 4.9
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 129 bits (312), Expect = 1e-30
Identities = 80/195 (41%), Positives = 114/195 (58%), Gaps = 11/195 (5%)
Frame = -2
Query: 634 SIMDMGYDRPQVXQALRASFNNRERAVEYLITGIPXXXXXXXXXXESS------DED--- 482
+I MGYDR Q ALRA+F N +RAVE+L+ G+P DED
Sbjct: 184 AITGMGYDREQTIAALRAAFWNPDRAVEFLLNGLPDDAADQEPDLGPEQNIDNVDEDGND 243
Query: 481 PLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNP 302
L L + PQ ++RA+IQQNP +L AVLQQ+ NP L+Q I +Q+AF+ +LN
Sbjct: 244 DLNMLANMPQLAEIRALIQQNPEMLAAVLQQLAAVNPRLVQTIQNNQQAFMDLLNG--GA 301
Query: 301 SAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKAL--GFPEHMVIQAYFACEKN 128
AG A+ N + P+ ++VI +S ++ AIER+KA+ PE +V++AYFAC+KN
Sbjct: 302 QGAGAAAG-NAPERNTPR---RHVIHLSPEEAAAIERIKAIVVNAPEAVVVEAYFACDKN 357
Query: 127 ENLAANFLLAQNFDD 83
E A NF+ + N D+
Sbjct: 358 EEAAINFIFS-NLDE 371
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = -2
Query: 316 EPVNPSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFAC 137
EPV +AA ++ AD+ ++ + +E + + +G+ I A A
Sbjct: 143 EPVPVAAAPASNPAPAADVAPEAAAPAEAEALTDEQEENVLAITGMGYDREQTIAALRAA 202
Query: 136 EKNENLAANFLLAQNFDD 83
N + A FLL DD
Sbjct: 203 FWNPDRAVEFLLNGLPDD 220
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical protein
T13H2.5b protein.
Length = 1092
Score = 32.7 bits (71), Expect = 0.23
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = -2
Query: 466 RDQPQFQQMRAVIQQN--PNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAA 293
+ Q Q QQ + + QQ PN+ +A LQQ Q QV+ Q+ V PV P A
Sbjct: 860 QQQIQMQQQQQLAQQGLVPNVSSAWLQQQAQLAQQQQQVVQQNLLMRVPSAQTPVAPRAP 919
Query: 292 GVASDENVADIQQP 251
VA V P
Sbjct: 920 TVAPQSVVQQAPAP 933
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 32.7 bits (71), Expect = 0.23
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = -2
Query: 466 RDQPQFQQMRAVIQQN--PNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAA 293
+ Q Q QQ + + QQ PN+ +A LQQ Q QV+ Q+ V PV P A
Sbjct: 2239 QQQIQMQQQQQLAQQGLVPNVSSAWLQQQAQLAQQQQQVVQQNLLMRVPSAQTPVAPRAP 2298
Query: 292 GVASDENVADIQQP 251
VA V P
Sbjct: 2299 TVAPQSVVQQAPAP 2312
>Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical
protein C56A3.7 protein.
Length = 351
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 168 NIW*YKPILLVKKMRILQLTFCWXRILM 85
NIW ++PIL++ +M Q+ W L+
Sbjct: 286 NIWIFRPILILTRMAFAQIVLIWPMFLI 313
>U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2
protein.
Length = 351
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 168 NIW*YKPILLVKKMRILQLTFCWXRILM 85
NIW ++PIL++ +M Q+ W L+
Sbjct: 286 NIWIFRPILILTRMAFAQIVLIWPMFLI 313
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/43 (23%), Positives = 27/43 (62%)
Frame = -2
Query: 475 AFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQ 347
+++RD+ QF+Q+ + N +L+++ + P+LL+++ +
Sbjct: 891 SYIRDREQFEQLLKSLNPRGNREVELLEELNEYRPSLLEILEE 933
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 451 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 338
F+Q + QQ P N ++QQ+G NP L ++ Q Q+
Sbjct: 870 FKQQQQQQQQQPQQSN-LMQQLGNINPQFLALLLQQQQ 906
Score = 29.5 bits (63), Expect = 2.1
Identities = 30/98 (30%), Positives = 37/98 (37%)
Frame = -2
Query: 496 SSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 317
SS E L + QF Q IQQNP L+NA Q I Q +Q +Q Q A
Sbjct: 946 SSPEMLGTLLNAKYQFPQFPQAIQQNPLLMNAQHQLILQQQQLAMQ-HAQAQAAQAAQAQ 1004
Query: 316 EPVNPSAAGVASDENVADIQQPQLGSQNVIQVSAQDKE 203
A A E Q Q +Q Q Q ++
Sbjct: 1005 AAQAAQAQAQAQAEAKLKTQAAQAKAQADAQARVQTQQ 1042
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 451 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 338
F+Q + QQ P N ++QQ+G NP L ++ Q Q+
Sbjct: 870 FKQQQQQQQQQPQQSN-LMQQLGNINPQFLALLLQQQQ 906
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 451 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 338
F+Q + QQ P N ++QQ+G NP L ++ Q Q+
Sbjct: 870 FKQQQQQQQQQPQQSN-LMQQLGNINPQFLALLLQQQQ 906
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -2
Query: 478 LAFLRDQPQFQQMR-AVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNP 302
+AF+R QP FQQ + A QQN N + + N Q+ +H R+ V+
Sbjct: 38 VAFVRRQPPFQQNQLAFQQQNRNFILPSASPLRHRNLFTRQISHRHFRPRQRITQPIVST 97
Query: 301 SAAGVASDENV 269
++ + + E+V
Sbjct: 98 TSEPITTTEDV 108
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 631 IMDMGYDRPQVXQALRASFNNRERAVEYL 545
++ MG+ ++ ALR S N+ E+A++YL
Sbjct: 85 LITMGFKSEEIDTALRLSNNDVEKAIQYL 113
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 631 IMDMGYDRPQVXQALRASFNNRERAVEYL 545
++ MG+ ++ ALR S N+ E+A++YL
Sbjct: 85 LITMGFKSEEIDTALRLSNNDVEKAIQYL 113
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 631 IMDMGYDRPQVXQALRASFNNRERAVEYL 545
++ MG+ ++ ALR S N+ E+A++YL
Sbjct: 85 LITMGFKSEEIDTALRLSNNDVEKAIQYL 113
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 631 IMDMGYDRPQVXQALRASFNNRERAVEYL 545
++ MG+ ++ ALR S N+ E+A++YL
Sbjct: 85 LITMGFKSEEIDTALRLSNNDVEKAIQYL 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,344,258
Number of Sequences: 27780
Number of extensions: 190278
Number of successful extensions: 540
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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