Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_L15
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    26   0.27 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.9  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 26/79 (32%), Positives = 37/79 (46%)
 Frame = -2

Query: 460 QPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVAS 281
           Q Q QQ + V QQ    + AV QQ  Q +    Q+I  HQ++   +    +N S + V S
Sbjct: 769 QQQVQQAQQVQQQMQAAMAAV-QQSQQRHQHAAQMIYGHQQSHHGL---HINSSPSSVQS 824

Query: 280 DENVADIQQPQLGSQNVIQ 224
            +    + Q  LG Q V Q
Sbjct: 825 GQQQQSVLQ-GLGVQGVQQ 842


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +1

Query: 382 DQSAVTQHLTNWDSVE*QHAFAEIVVDLAG 471
           ++ A+T   T+W+ V   + + ++V D+ G
Sbjct: 423 EREAITFQYTDWEEVYNGYIYQKMVADVVG 452


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +1

Query: 382 DQSAVTQHLTNWDSVE*QHAFAEIVVDLAG 471
           ++ A+T   T+W+ V   + + ++V D+ G
Sbjct: 423 EREAITFQYTDWEEVYNGYIYQKMVADVVG 452


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,228
Number of Sequences: 438
Number of extensions: 2135
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)