Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_L11
         (718 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   1.2  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   6.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   8.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   8.8  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -2

Query: 465 NEYGENIFYAWSTDPAFTVSGRDPVDKWYSEINNHKFGREPTNLDSGHFSQVIWEE 298
           N Y    F+  S+   F VS R   D+  S+ + H+F   P   + GH +  + +E
Sbjct: 269 NGYRTLFFHPLSSRREFAVSTRILRDENLSQNSYHEFQILPERGELGHCTASVMDE 324


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 419 AGSVDQA*NIFSPYSF*SLCSV 484
           AGSV+   +IF  Y++ ++C +
Sbjct: 488 AGSVEALLDIFDTYTYDTICQL 509


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 477 VQSGLFWPTLSPILRRTY 530
           +QSG+F   LSP+ +  Y
Sbjct: 247 LQSGIFGMALSPLTQNLY 264


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/49 (20%), Positives = 20/49 (40%)
 Frame = -2

Query: 402 RDPVDKWYSEINNHKFGREPTNLDSGHFSQVIWEETKEIGVGVAKSKEG 256
           ++ +D     + NH       +   G  S  +W+    +G+   K K+G
Sbjct: 413 QEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPK-KDG 460


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,556
Number of Sequences: 438
Number of extensions: 4326
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)