Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_L06
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69885-4|CAA93757.1|  208|Caenorhabditis elegans Hypothetical pr...    43   2e-04
Z77136-9|CAI91180.1|  474|Caenorhabditis elegans Hypothetical pr...    34   0.087
Z77136-7|CAD54177.1|  472|Caenorhabditis elegans Hypothetical pr...    34   0.087
Z77136-6|CAB00883.1|  488|Caenorhabditis elegans Hypothetical pr...    34   0.087
Z82076-5|CAB04935.2|  307|Caenorhabditis elegans Hypothetical pr...    32   0.46 
AF000262-5|AAN60522.1|  100|Caenorhabditis elegans Hypothetical ...    30   1.4  
Z32840-3|CAB63430.2|  457|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AC006696-10|AAF39990.1|  228|Caenorhabditis elegans Hypothetical...    27   9.9  

>Z69885-4|CAA93757.1|  208|Caenorhabditis elegans Hypothetical
           protein T04C10.4 protein.
          Length = 208

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = -1

Query: 669 DRRSRKKEXNXXAATRYRQXXXXXXXXXXXXEQTLRQRHTELGEKCSDLQREIRYLKALM 490
           +++ RKK  N  AATRYR+             + L   + +L ++ S+L+REIRY K  M
Sbjct: 139 EKKERKKAQNRLAATRYREKKRREKEEAMTCIEGLSVTNGKLKDQVSELEREIRYFKKFM 198

Query: 489 RDL 481
            ++
Sbjct: 199 TEM 201


>Z77136-9|CAI91180.1|  474|Caenorhabditis elegans Hypothetical
           protein ZC376.7c protein.
          Length = 474

 Score = 34.3 bits (75), Expect = 0.087
 Identities = 20/66 (30%), Positives = 31/66 (46%)
 Frame = -1

Query: 678 SVDDRRSRKKEXNXXAATRYRQXXXXXXXXXXXXEQTLRQRHTELGEKCSDLQREIRYLK 499
           SVD+   R++  N  AA RYR+             Q +  R+  L +K   L+REI  +K
Sbjct: 404 SVDEETDRRRMLNRIAAVRYREKKRAEKKGRKMEFQEVADRNRILLQKERQLKREINSMK 463

Query: 498 ALMRDL 481
             +R +
Sbjct: 464 KELRKM 469


>Z77136-7|CAD54177.1|  472|Caenorhabditis elegans Hypothetical
           protein ZC376.7b protein.
          Length = 472

 Score = 34.3 bits (75), Expect = 0.087
 Identities = 20/66 (30%), Positives = 31/66 (46%)
 Frame = -1

Query: 678 SVDDRRSRKKEXNXXAATRYRQXXXXXXXXXXXXEQTLRQRHTELGEKCSDLQREIRYLK 499
           SVD+   R++  N  AA RYR+             Q +  R+  L +K   L+REI  +K
Sbjct: 402 SVDEETDRRRMLNRIAAVRYREKKRAEKKGRKMEFQEVADRNRILLQKERQLKREINSMK 461

Query: 498 ALMRDL 481
             +R +
Sbjct: 462 KELRKM 467


>Z77136-6|CAB00883.1|  488|Caenorhabditis elegans Hypothetical
           protein ZC376.7a protein.
          Length = 488

 Score = 34.3 bits (75), Expect = 0.087
 Identities = 20/66 (30%), Positives = 31/66 (46%)
 Frame = -1

Query: 678 SVDDRRSRKKEXNXXAATRYRQXXXXXXXXXXXXEQTLRQRHTELGEKCSDLQREIRYLK 499
           SVD+   R++  N  AA RYR+             Q +  R+  L +K   L+REI  +K
Sbjct: 418 SVDEETDRRRMLNRIAAVRYREKKRAEKKGRKMEFQEVADRNRILLQKERQLKREINSMK 477

Query: 498 ALMRDL 481
             +R +
Sbjct: 478 KELRKM 483


>Z82076-5|CAB04935.2|  307|Caenorhabditis elegans Hypothetical
           protein W07G1.3 protein.
          Length = 307

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -1

Query: 693 RXKTRSVDDRRSRKKEXNXXAATRYRQXXXXXXXXXXXXEQTLRQRHTELGEKCSDLQRE 514
           R +  S ++   RK+  N  AA RYR+               L +R+ EL ++ S ++RE
Sbjct: 236 REEEESPEEILRRKRIQNNLAAARYRKRQREARESAESELGDLTRRNDELRDQVSRMERE 295

Query: 513 IRYLK 499
           I  LK
Sbjct: 296 IDRLK 300


>AF000262-5|AAN60522.1|  100|Caenorhabditis elegans Hypothetical
           protein C48E7.11 protein.
          Length = 100

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/69 (26%), Positives = 28/69 (40%)
 Frame = -1

Query: 672 DDRRSRKKEXNXXAATRYRQXXXXXXXXXXXXEQTLRQRHTELGEKCSDLQREIRYLKAL 493
           +D  S K++ N  A  R RQ               L++ +  L  K   LQ+E+ +LK +
Sbjct: 17  EDDYSTKRKRNNEAVNRTRQKKRQEENDTAEKVDELKKENETLERKVEQLQKELSFLKEM 76

Query: 492 MRDLFKAKG 466
                K  G
Sbjct: 77  FMAYAKNDG 85


>Z32840-3|CAB63430.2|  457|Caenorhabditis elegans Hypothetical
           protein C07G2.2a protein.
          Length = 457

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = -1

Query: 672 DDRRSRKKEXNXXAATRYRQXXXXXXXXXXXXEQTLRQRHTELGEKCSDLQREIRYLKAL 493
           D+RR+   E N  AA RYR+             Q +     +L  +   L+RE+  + AL
Sbjct: 342 DERRNTILERNKAAAVRYRKRKKEEHDDMMGRVQAMEAEKNQLLTQNQVLRRELERVTAL 401

Query: 492 MRD 484
           + +
Sbjct: 402 LTE 404


>Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical
           protein T14G8.3b protein.
          Length = 905

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -1

Query: 552 TELGEKCSDLQREIRYL 502
           +E+ EK  DL+RE+RYL
Sbjct: 808 SEIAEKARDLEREVRYL 824


>Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical
           protein T14G8.3a protein.
          Length = 921

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -1

Query: 552 TELGEKCSDLQREIRYL 502
           +E+ EK  DL+RE+RYL
Sbjct: 824 SEIAEKARDLEREVRYL 840


>AC006696-10|AAF39990.1|  228|Caenorhabditis elegans Hypothetical
           protein W08E12.1 protein.
          Length = 228

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 19/64 (29%), Positives = 27/64 (42%)
 Frame = -1

Query: 660 SRKKEXNXXAATRYRQXXXXXXXXXXXXEQTLRQRHTELGEKCSDLQREIRYLKALMRDL 481
           SRK++ N  AA RYR              +    R+  L  +   L++E+    A MR  
Sbjct: 165 SRKRQQNKVAAARYRDKQKAKWQDLLDQLEAEEDRNQRLKLQAGHLEKEV----AEMRQA 220

Query: 480 FKAK 469
           F AK
Sbjct: 221 FLAK 224


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,608,904
Number of Sequences: 27780
Number of extensions: 222079
Number of successful extensions: 485
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)