Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_L04
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025727-9|ABD63208.1| 146|Caenorhabditis elegans Hypothetical ... 105 2e-23
AC025727-8|AAG23390.2| 223|Caenorhabditis elegans Hypothetical ... 105 2e-23
U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2... 35 0.039
U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2... 35 0.039
AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility... 35 0.039
U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2... 34 0.067
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 29 3.3
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 29 3.3
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 28 5.9
Z99288-8|CAB16550.1| 231|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z82069-2|CAB04904.1| 315|Caenorhabditis elegans Hypothetical pr... 27 7.7
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr... 27 7.7
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 7.7
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 7.7
U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein. 27 7.7
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 27 7.7
>AC025727-9|ABD63208.1| 146|Caenorhabditis elegans Hypothetical
protein Y73E7A.1b protein.
Length = 146
Score = 105 bits (253), Expect = 2e-23
Identities = 49/103 (47%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Frame = -1
Query: 446 ETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVD--RHPEKRLKAA 273
E K K+ + L ENLN+++++ A+ VD+AL +L ++ +D +HPEKR++AA
Sbjct: 38 EKRKQEAQKIEVAGDLLVENLNKLEVEEGEARNVDDALKVLGEEKALDDDKHPEKRMRAA 97
Query: 272 FTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQNPLNQR 144
+ AFE+ LP LK +P+ RLSQLK++LKKEW KSP+NPLN R
Sbjct: 98 YLAFEEARLPELKLNHPTFRLSQLKQILKKEWQKSPENPLNAR 140
>AC025727-8|AAG23390.2| 223|Caenorhabditis elegans Hypothetical
protein Y73E7A.1a protein.
Length = 223
Score = 105 bits (253), Expect = 2e-23
Identities = 49/103 (47%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Frame = -1
Query: 446 ETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVD--RHPEKRLKAA 273
E K K+ + L ENLN+++++ A+ VD+AL +L ++ +D +HPEKR++AA
Sbjct: 115 EKRKQEAQKIEVAGDLLVENLNKLEVEEGEARNVDDALKVLGEEKALDDDKHPEKRMRAA 174
Query: 272 FTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQNPLNQR 144
+ AFE+ LP LK +P+ RLSQLK++LKKEW KSP+NPLN R
Sbjct: 175 YLAFEEARLPELKLNHPTFRLSQLKQILKKEWQKSPENPLNAR 217
>U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2,
isoform b protein.
Length = 234
Score = 35.1 bits (77), Expect = 0.039
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = -1
Query: 395 EENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSL 216
+++ R Q + +A E + + D H KR +AF + Q P ++A +P
Sbjct: 100 QKDAERYQAEVSVAAYGGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDW 159
Query: 215 RLSQLKELLKKEWHKSPQ 162
++ Q+ + L K W PQ
Sbjct: 160 KVGQVAQELGKMWKLVPQ 177
>U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2,
isoform a protein.
Length = 235
Score = 35.1 bits (77), Expect = 0.039
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = -1
Query: 395 EENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSL 216
+++ R Q + +A E + + D H KR +AF + Q P ++A +P
Sbjct: 101 QKDAERYQAEVSVAAYGGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDW 160
Query: 215 RLSQLKELLKKEWHKSPQ 162
++ Q+ + L K W PQ
Sbjct: 161 KVGQVAQELGKMWKLVPQ 178
>AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility
group protein 1.2 protein.
Length = 235
Score = 35.1 bits (77), Expect = 0.039
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = -1
Query: 395 EENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSL 216
+++ R Q + +A E + + D H KR +AF + Q P ++A +P
Sbjct: 101 QKDAERYQAEVSVAAYGGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDW 160
Query: 215 RLSQLKELLKKEWHKSPQ 162
++ Q+ + L K W PQ
Sbjct: 161 KVGQVAQELGKMWKLVPQ 178
>U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2,
isoform c protein.
Length = 233
Score = 34.3 bits (75), Expect = 0.067
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -1
Query: 305 DRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQ 162
D H KR +AF + Q P ++A +P ++ Q+ + L K W PQ
Sbjct: 129 DPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQ 176
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
protein F13B9.1c protein.
Length = 1609
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -1
Query: 437 KPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEK 288
K VPS V E+P EE+ L G +Q E S +PE+ HP K
Sbjct: 307 KAVPSTAVSEKP--EESRESSSLGGSWSQQDTEPSERSSVEPEILEHPVK 354
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
protein F13B9.1b protein.
Length = 1614
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -1
Query: 437 KPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEK 288
K VPS V E+P EE+ L G +Q E S +PE+ HP K
Sbjct: 307 KAVPSTAVSEKP--EESRESSSLGGSWSQQDTEPSERSSVEPEILEHPVK 354
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
protein F13B9.1a protein.
Length = 1632
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -1
Query: 437 KPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEK 288
K VPS V E+P EE+ L G +Q E S +PE+ HP K
Sbjct: 307 KAVPSTAVSEKP--EESRESSSLGGSWSQQDTEPSERSSVEPEILEHPVK 354
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 479 ISQAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQT 348
++Q + + + E AKP + +EPP E +I L G+L ++
Sbjct: 584 VTQPEMEPSSSEPAKPAKPSITKKEPPSETMSAKISLIGDLQKS 627
>Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical
protein F08H9.1 protein.
Length = 607
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -1
Query: 428 PSKVVIEEPPLEE--NLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKAAFTAFEQ 255
P+K + +E + +L + L +L T+DE S + E++ + F +Q
Sbjct: 237 PTKSIPQEEEFQPATHLKEMLLFRQLPITLDETERRRSMEEEMEEARNSGINTEFIPPQQ 296
Query: 254 INLPRLKAENPSL 216
+++PRL +EN L
Sbjct: 297 MDVPRLVSENMDL 309
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = -1
Query: 479 ISQAKEKMAK-PETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVD 303
+ +A EK+ K P++ + P+K ++PPL++ ++DG + + + S PE
Sbjct: 1471 VEKAVEKVEKKPKSPQKPPAKPTAQKPPLKKT---EEVDGIEREASESSSKESSVAPEEK 1527
Query: 302 RHPEK 288
++P+K
Sbjct: 1528 KNPKK 1532
>Z99288-8|CAB16550.1| 231|Caenorhabditis elegans Hypothetical
protein ZK262.9 protein.
Length = 231
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 467 KEKMAKPETAKPVPSKVVIEEPPL 396
+EK A ET +P P+ +++ PP+
Sbjct: 3 REKAASVETIRPTPANSIVKAPPV 26
>Z82069-2|CAB04904.1| 315|Caenorhabditis elegans Hypothetical
protein W04A8.3 protein.
Length = 315
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 341 EALAILSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 186
EAL I S + +++ E R F E ++LPRLK ++ + LK +LK
Sbjct: 111 EALFINSHRKDIE--VELRQLLNFLKTEALHLPRLKFKHEHISSKLLKRILK 160
>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
protein ZK154.5 protein.
Length = 1105
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 437 KPVPSKVVIEEPPLEENLNRIQLDGELAQTV-DEALA 330
K P K +I+ PPL E + + L E Q + DEALA
Sbjct: 155 KNKPKKAIIQPPPLLEIYSPVGLTAEEEQRLNDEALA 191
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -1
Query: 341 EALAILSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELL 189
E+ +S++PEVD + + + K A E+ NL L E PS S +++
Sbjct: 6165 ESCQEISNEPEVDYYSDLQEKLNILAGEKNNLHALVEEEPSSSASDQLDVI 6215
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -1
Query: 341 EALAILSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELL 189
E+ +S++PEVD + + + K A E+ NL L E PS S +++
Sbjct: 6165 ESCQEISNEPEVDYYSDLQEKLNILAGEKNNLHALVEEEPSSSASDQLDVI 6215
>U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein.
Length = 869
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -1
Query: 341 EALAILSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELL 189
E+ +S++PEVD + + + K A E+ NL L E PS S +++
Sbjct: 40 ESCQEISNEPEVDYYSDLQEKLNILAGEKNNLHALVEEEPSSSASDQLDVI 90
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -1
Query: 479 ISQAKEKMAK-PETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVD 303
+ +A EK+ K P++ + P+K + PPL++ ++DG + + + S PE
Sbjct: 1450 VEKAVEKVEKKPKSPQKPPAKPTAQNPPLKKT---EEVDGIEREASESSSKESSVAPEEK 1506
Query: 302 RHPEK 288
++P+K
Sbjct: 1507 KNPKK 1511
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,742,936
Number of Sequences: 27780
Number of extensions: 184133
Number of successful extensions: 662
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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