Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_K24
(444 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81586-3|CAB04691.1| 203|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p... 27 4.6
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p... 27 4.6
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 27 4.6
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z71263-7|CAH10797.1| 126|Caenorhabditis elegans Hypothetical pr... 27 8.1
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 27 8.1
>Z81586-3|CAB04691.1| 203|Caenorhabditis elegans Hypothetical
protein T05F1.4 protein.
Length = 203
Score = 27.5 bits (58), Expect = 4.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 369 IRNKMFQRHFTINRRCDIQWHFQCHSFNS*RKYS*LERRFWSPANHGDI 223
IR+ RH + +RR + H FN+ R+ + R SP+NH +
Sbjct: 33 IRDNQSDRHLSPDRRSNHSEDRHEHRFNNYRQQNRPNSRTPSPSNHNQV 81
>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
protein C53B4.4e protein.
Length = 1544
Score = 27.5 bits (58), Expect = 4.6
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 247 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 420
PES ++ + L V A +V TP S PD++ S+ST T N+ NI
Sbjct: 1031 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 1090
Query: 421 SVD 429
S D
Sbjct: 1091 SAD 1093
>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
protein C53B4.4d protein.
Length = 1301
Score = 27.5 bits (58), Expect = 4.6
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 247 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 420
PES ++ + L V A +V TP S PD++ S+ST T N+ NI
Sbjct: 751 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 810
Query: 421 SVD 429
S D
Sbjct: 811 SAD 813
>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
protein C53B4.4c protein.
Length = 1304
Score = 27.5 bits (58), Expect = 4.6
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 247 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 420
PES ++ + L V A +V TP S PD++ S+ST T N+ NI
Sbjct: 751 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 810
Query: 421 SVD 429
S D
Sbjct: 811 SAD 813
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
C53B4.4b protein.
Length = 1586
Score = 27.5 bits (58), Expect = 4.6
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 247 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 420
PES ++ + L V A +V TP S PD++ S+ST T N+ NI
Sbjct: 1033 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 1092
Query: 421 SVD 429
S D
Sbjct: 1093 SAD 1095
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
C53B4.4a protein.
Length = 1584
Score = 27.5 bits (58), Expect = 4.6
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 247 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 420
PES ++ + L V A +V TP S PD++ S+ST T N+ NI
Sbjct: 1031 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 1090
Query: 421 SVD 429
S D
Sbjct: 1091 SAD 1093
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 27.1 bits (57), Expect = 6.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 209 CPTGYGRAQDNTCQLIIE 156
CPTG+ +A D +CQ I E
Sbjct: 1478 CPTGFRKADDGSCQDIDE 1495
>Z71263-7|CAH10797.1| 126|Caenorhabditis elegans Hypothetical
protein F52A8.3b protein.
Length = 126
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -3
Query: 247 ESRKSRR-YSSEMVAQLVMAERKITPVS**SSNQKDSTLYFQNVRLANRKI*INS 86
+ +KS++ YS+ +V+ ++A+ P+ N + Y Q+ R A R+I ++S
Sbjct: 26 QRKKSKKEYSTSLVSSPIIAQSAPVPIPVNYDNIPGNANYIQHTRQAPRQIHVDS 80
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +1
Query: 247 PESPFKSTVFSLRVKTVALKVPLNITPSIDGEVTLKHFIPDTLISNSTV 393
PE P + ++ S+ A V L+ TP DG ++ ++ + +++S+V
Sbjct: 1054 PELPGRPSMLSIG-DISATTVQLHFTPGFDGHTAIRQWVVEGKMADSSV 1101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,247,526
Number of Sequences: 27780
Number of extensions: 193891
Number of successful extensions: 522
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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