BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_K18
(711 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578802-1|AAT07307.1| 108|Anopheles gambiae FK506-binding prot... 50 5e-08
AY330178-1|AAQ16284.1| 176|Anopheles gambiae odorant-binding pr... 23 7.2
AJ618922-1|CAF02001.1| 272|Anopheles gambiae odorant-binding pr... 23 7.2
AJ618921-1|CAF02000.1| 172|Anopheles gambiae putative odorant-b... 23 7.2
AY545988-1|AAS99341.1| 423|Anopheles gambiae carboxypeptidase B... 23 9.5
AJ627286-1|CAF28572.1| 423|Anopheles gambiae carboxypeptidase B... 23 9.5
>AY578802-1|AAT07307.1| 108|Anopheles gambiae FK506-binding protein
protein.
Length = 108
Score = 50.4 bits (115), Expect = 5e-08
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -3
Query: 709 VGGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNVK 590
VG K++C P AYG++G P VIPPN+ L F+VEL V+
Sbjct: 69 VGQRAKLVCSPDYAYGSRGHPGVIPPNARLTFDVELLRVE 108
>AY330178-1|AAQ16284.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP51 protein.
Length = 176
Score = 23.4 bits (48), Expect = 7.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 160 KIASCCY*NIFGEIKTY*N 216
K+ASCC F +KTY N
Sbjct: 34 KVASCCQLEEFLTLKTYGN 52
>AJ618922-1|CAF02001.1| 272|Anopheles gambiae odorant-binding
protein OBPjj5a protein.
Length = 272
Score = 23.4 bits (48), Expect = 7.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 160 KIASCCY*NIFGEIKTY*N 216
K+ASCC F +KTY N
Sbjct: 36 KVASCCQLEEFLTLKTYGN 54
>AJ618921-1|CAF02000.1| 172|Anopheles gambiae putative
odorant-binding protein OBP5479 protein.
Length = 172
Score = 23.4 bits (48), Expect = 7.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 160 KIASCCY*NIFGEIKTY*N 216
K+ASCC F +KTY N
Sbjct: 36 KVASCCQLEEFLTLKTYGN 54
>AY545988-1|AAS99341.1| 423|Anopheles gambiae carboxypeptidase B
precursor protein.
Length = 423
Score = 23.0 bits (47), Expect = 9.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 404 ICHLETSQEDCYNYMIGVNVKFTLRLAG 321
I + + D Y Y +GV +TL L G
Sbjct: 358 ILYTASGATDDYAYSLGVPYSYTLELTG 385
>AJ627286-1|CAF28572.1| 423|Anopheles gambiae carboxypeptidase B
protein.
Length = 423
Score = 23.0 bits (47), Expect = 9.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 404 ICHLETSQEDCYNYMIGVNVKFTLRLAG 321
I + + D Y Y +GV +TL L G
Sbjct: 358 ILYTASGATDDYAYSLGVPYSYTLELTG 385
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,505
Number of Sequences: 2352
Number of extensions: 12965
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -