Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_K12
         (703 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ062760-1|AAY56633.1|  200|Drosophila melanogaster mitochondria...   158   8e-39
AY095194-1|AAM12287.1|  200|Drosophila melanogaster RE01527p pro...   158   8e-39
AE014297-2304|AAF55385.1|  200|Drosophila melanogaster CG5184-PA...   158   8e-39
AY089696-1|AAL90434.1|  178|Drosophila melanogaster RH70248p pro...   144   8e-35
AY118513-1|AAM49882.1|  472|Drosophila melanogaster LD14179p pro...    39   0.008
AE014296-319|AAF47537.1|  472|Drosophila melanogaster CG17249-PA...    39   0.008
AY089583-1|AAL90321.1|  480|Drosophila melanogaster RE11624p pro...    29   8.1  
AE014297-2656|AAF55663.2|  480|Drosophila melanogaster CG18493-P...    29   8.1  

>DQ062760-1|AAY56633.1|  200|Drosophila melanogaster mitochondrial
           ribosomal proteinS11 protein.
          Length = 200

 Score =  158 bits (383), Expect = 8e-39
 Identities = 72/113 (63%), Positives = 89/113 (78%)
 Frame = -3

Query: 686 LYNGIPYKDLPICNIRVSHXNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXX 507
           L+NGIP+ +LPICNIRVS  NTI ++T+  G +R+IRSCG+EGFKNT+KG          
Sbjct: 80  LFNGIPFNELPICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAV 139

Query: 506 XXXTKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPP 348
               KA+  G+ TVRV+V+GLGPGR+SA+KGLQMGGLNIVSITDNTHVS+NPP
Sbjct: 140 TISGKAIELGWKTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPP 192


>AY095194-1|AAM12287.1|  200|Drosophila melanogaster RE01527p
           protein.
          Length = 200

 Score =  158 bits (383), Expect = 8e-39
 Identities = 72/113 (63%), Positives = 89/113 (78%)
 Frame = -3

Query: 686 LYNGIPYKDLPICNIRVSHXNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXX 507
           L+NGIP+ +LPICNIRVS  NTI ++T+  G +R+IRSCG+EGFKNT+KG          
Sbjct: 80  LFNGIPFNELPICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAV 139

Query: 506 XXXTKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPP 348
               KA+  G+ TVRV+V+GLGPGR+SA+KGLQMGGLNIVSITDNTHVS+NPP
Sbjct: 140 TISGKAIELGWKTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPP 192


>AE014297-2304|AAF55385.1|  200|Drosophila melanogaster CG5184-PA,
           isoform A protein.
          Length = 200

 Score =  158 bits (383), Expect = 8e-39
 Identities = 72/113 (63%), Positives = 89/113 (78%)
 Frame = -3

Query: 686 LYNGIPYKDLPICNIRVSHXNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXX 507
           L+NGIP+ +LPICNIRVS  NTI ++T+  G +R+IRSCG+EGFKNT+KG          
Sbjct: 80  LFNGIPFNELPICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAV 139

Query: 506 XXXTKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPP 348
               KA+  G+ TVRV+V+GLGPGR+SA+KGLQMGGLNIVSITDNTHVS+NPP
Sbjct: 140 TISGKAIELGWKTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPP 192


>AY089696-1|AAL90434.1|  178|Drosophila melanogaster RH70248p
           protein.
          Length = 178

 Score =  144 bits (350), Expect = 8e-35
 Identities = 67/105 (63%), Positives = 82/105 (78%)
 Frame = -3

Query: 662 DLPICNIRVSHXNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVV 483
           +LPICNIRVS  NTI ++T+  G +R+IRSCG+EGFKNT+KG              KA+ 
Sbjct: 66  ELPICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIE 125

Query: 482 QGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPP 348
            G+ TVRV+V+GLGPGR+SA+KGLQMGGLNIVSITDNTHVS+NPP
Sbjct: 126 LGWKTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPP 170


>AY118513-1|AAM49882.1|  472|Drosophila melanogaster LD14179p
           protein.
          Length = 472

 Score = 38.7 bits (86), Expect = 0.008
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +2

Query: 113 QAKANEAELQNQWANNRMSRRQTQS 187
           +AKANEAELQ  W+ NR +RR TQS
Sbjct: 444 KAKANEAELQAMWSANRQTRRATQS 468


>AE014296-319|AAF47537.1|  472|Drosophila melanogaster CG17249-PA
           protein.
          Length = 472

 Score = 38.7 bits (86), Expect = 0.008
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +2

Query: 113 QAKANEAELQNQWANNRMSRRQTQS 187
           +AKANEAELQ  W+ NR +RR TQS
Sbjct: 444 KAKANEAELQAMWSANRQTRRATQS 468


>AY089583-1|AAL90321.1|  480|Drosophila melanogaster RE11624p
           protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -1

Query: 382 SQITHMCHGIHQEQGKQGDCKSYCKYLLNYS 290
           S I+++  G+ Q QG  GD + YC YLL+++
Sbjct: 279 SSISNIFAGVAQYQGT-GDIEYYCDYLLSFN 308


>AE014297-2656|AAF55663.2|  480|Drosophila melanogaster CG18493-PA
           protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -1

Query: 382 SQITHMCHGIHQEQGKQGDCKSYCKYLLNYS 290
           S I+++  G+ Q QG  GD + YC YLL+++
Sbjct: 279 SSISNIFAGVAQYQGT-GDIEYYCDYLLSFN 308


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,716,665
Number of Sequences: 53049
Number of extensions: 445914
Number of successful extensions: 1219
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)