Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_K12
         (703 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.92 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.6  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   3.7  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   6.5  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   6.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.5  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   6.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   8.6  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 38  IPSNIKQN*TSCVSSKLYL*NXLF-PQAKANEAELQNQWANNRMSRRQTQ 184
           +P+++ Q  TS VS  LYL    F P++K N+ +   Q     + R+  +
Sbjct: 405 VPTSVIQAATSSVSDDLYLLELGFPPRSKKNKLKKPRQGDGAAVKRKSRE 454


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 671 PYKDLPICNIRVSHXNTIFTLTEPDGKVRI 582
           P+ +L   NI +SH NT++ L    G +R+
Sbjct: 257 PHLELTFENI-LSHINTVYVLRTKKGVMRV 285


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +3

Query: 72  VFPQNYIYEXLYFHRQKQMKQSYRTNGLTTECQEDKHNPNMDSRKKKTN--INMKNSWN 242
           +FPQ   Y   YF+ +     S  ++ L  + +E++   N  +     N  ++M+N+ N
Sbjct: 131 IFPQENNYNDNYFYSKSNGSNSSNSDVLFKQNKEEEQTINRKNSDYLDNQEVSMENTEN 189


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 671 PYKDLPICNIRVSHXNTIFTLTEPDGKVRI 582
           P+ +L   NI +SH NT++ L    G +R+
Sbjct: 257 PHLELTFENI-LSHINTVYVLRTKKGVMRV 285


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 585 NHKIMRHGRIQEHQKRNQH 529
           NH   RH    ++Q  NQH
Sbjct: 428 NHNQARHSSKSDNQNNNQH 446


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 431 IALVPSLGLLLVQYYIP 481
           I  V S+G  L+Q YIP
Sbjct: 214 IQFVRSMGYYLIQIYIP 230


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 431 IALVPSLGLLLVQYYIP 481
           I  V S+G  L+Q YIP
Sbjct: 214 IQFVRSMGYYLIQIYIP 230


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 406 ICKPLTADNRPGPKPWTLTRTVLY 477
           IC  LTAD +PG   + +T  + Y
Sbjct: 644 ICTKLTADCQPGVTAFIVTSWLGY 667


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 431 IALVPSLGLLLVQYYIP 481
           I  V S+G  L+Q YIP
Sbjct: 153 IQFVRSMGYYLIQIYIP 169


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 102 LYFHRQKQMKQSYRT 146
           +YF RQ ++   YRT
Sbjct: 698 MYFRRQVELSNMYRT 712


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,588
Number of Sequences: 438
Number of extensions: 3289
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)