Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_K10
         (353 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006662-3|AAF39895.1|  368|Caenorhabditis elegans Hypothetical ...    32   0.10 
Z81581-7|CAB04659.1|  269|Caenorhabditis elegans Hypothetical pr...    27   2.8  
AF098997-10|AAC68712.2|  325|Caenorhabditis elegans Serpentine r...    26   6.6  
Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p...    26   8.7  
Z74030-2|CAA98441.1|  231|Caenorhabditis elegans Hypothetical pr...    26   8.7  
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ...    26   8.7  
AL117204-39|CAB55145.4|  422|Caenorhabditis elegans Hypothetical...    26   8.7  
AF098997-9|AAC68720.1|  325|Caenorhabditis elegans Serpentine re...    26   8.7  

>AC006662-3|AAF39895.1|  368|Caenorhabditis elegans Hypothetical
           protein H23L24.4 protein.
          Length = 368

 Score = 32.3 bits (70), Expect = 0.10
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 204 IWLLARSKFLIPNILF*YNYSSKCSLKFFYVKLTMKIN*LVISS 335
           +W    SK+L+PN +F Y  SS C+  + +V L +    L++ S
Sbjct: 35  LWDRTYSKYLLPNSIFLYKRSSTCTRTYIFVILRLSSIILLVFS 78


>Z81581-7|CAB04659.1|  269|Caenorhabditis elegans Hypothetical
           protein T02E1.7 protein.
          Length = 269

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +1

Query: 13  HIFLCSFSLLVAVMLDVDQHPGWDGRPAHHHQAGEEDHLTSGNLXFLAECR 165
           H+   + S++ A+ML V ++     +PA++ Q   ++H        LA CR
Sbjct: 115 HLLTRNISIVAAIMLLVAENMLRKPKPANYTQLPRDEHEIEVTSVLLAACR 165


>AF098997-10|AAC68712.2|  325|Caenorhabditis elegans Serpentine
           receptor, class i protein43 protein.
          Length = 325

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 156 GVQITLMFLCWATFLKIWLLARSKFLIPNILF 251
           G+Q  L+FLC+A   +     +   +IP ILF
Sbjct: 98  GIQYVLLFLCFARRHQAIAKIKQHHVIPEILF 129


>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
           protein M01G12.12 protein.
          Length = 1579

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +2

Query: 2   RIDYIFFCAHFLCLSRXCLMLTNTQAGMADQPTTIRLARKIISPLETL 145
           RI  I+ C H +C  R  + LTN  +    +    R+ + I +P   +
Sbjct: 414 RIGSIWKCFHKICQKRLVMQLTNGMSEQEIEEGYQRVRKVIFTPTRVI 461


>Z74030-2|CAA98441.1|  231|Caenorhabditis elegans Hypothetical
           protein D1054.2 protein.
          Length = 231

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 168 LSALRQEXKVSRGEMIFLASLMVVGWSAIP 79
           ++A+ QE   S G   F ASL++ GW   P
Sbjct: 110 IAAVMQEYTQSGGVRPFGASLLIAGWDKNP 139


>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
           protein M01G12.12 protein.
          Length = 1579

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +2

Query: 2   RIDYIFFCAHFLCLSRXCLMLTNTQAGMADQPTTIRLARKIISPLETL 145
           RI  I+ C H +C  R  + LTN  +    +    R+ + I +P   +
Sbjct: 414 RIGSIWKCFHKICQKRLVMQLTNGMSEQEIEEGYQRVRKVIFTPTRVI 461


>AL117204-39|CAB55145.4|  422|Caenorhabditis elegans Hypothetical
           protein Y116A8C.9 protein.
          Length = 422

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = +1

Query: 13  HIFLCSFSLLVAVMLDVDQ--HPGW 81
           HIFLC+F  LV + L+ D    PG+
Sbjct: 94  HIFLCTFVSLVFIKLEFDYLFEPGY 118


>AF098997-9|AAC68720.1|  325|Caenorhabditis elegans Serpentine
           receptor, class i protein42 protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 156 GVQITLMFLCWATFLKIWLLARSKFLIPNIL 248
           GVQ  L+FLC+A   +     + + +IPN L
Sbjct: 98  GVQYVLLFLCFARRHQAIAKIKQQHVIPNFL 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,980,999
Number of Sequences: 27780
Number of extensions: 148402
Number of successful extensions: 352
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)