Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_K08
(638 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 66 3e-12
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 64 1e-11
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 59 5e-10
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 56 3e-09
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 54 1e-08
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 54 2e-08
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 40 3e-04
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 28 1.3
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 27 1.7
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch... 27 2.3
SPAC1952.05 |gcn5||histone acetyltransferase Gcn5|Schizosaccharo... 27 2.3
SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr ... 25 7.0
SPBC1105.07c |||nuclear pore associated protein Thp1-Sac3 comple... 25 7.0
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 25 9.2
SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr 2... 25 9.2
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 66.5 bits (155), Expect = 3e-12
Identities = 30/90 (33%), Positives = 51/90 (56%)
Frame = -1
Query: 338 IVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESIIAESKGKVVLAKVDIDE 159
+ ++ + +FK V K+ VVVDFFATWC PC+ + P+ E + + KVD+D+
Sbjct: 2 VKQVSDSSEFKSIVCQDKL-VVVDFFATWCGPCKAIAPKFEQ-FSNTYSDATFIKVDVDQ 59
Query: 158 QTDLALDYEVSSVPVLVAIKNGKVQNRLVG 69
+++A + V ++P KNG+ +VG
Sbjct: 60 LSEIAAEAGVHAMPSFFLYKNGEKIEEIVG 89
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 64.5 bits (150), Expect = 1e-11
Identities = 32/107 (29%), Positives = 59/107 (55%)
Frame = -1
Query: 389 KNYGFLRNFSLTASKNDIVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESI 210
+++ R+F+ + + ++S D+ ++ KV VVDF+A WC PC+ L P LE
Sbjct: 2 RSFALRRSFTSSRILRKVNAVESFGDYNTRISADKV-TVVDFYADWCGPCKYLKPFLEK- 59
Query: 209 IAESKGKVVLAKVDIDEQTDLALDYEVSSVPVLVAIKNGKVQNRLVG 69
++E K V+ D+ +D+A V ++P +V + G+ +R+VG
Sbjct: 60 LSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIVG 106
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 59.3 bits (137), Expect = 5e-10
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Frame = -1
Query: 338 IVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESI--IAESKGKVVLAKVDI 165
+V++QS ++ + + SK +++F+ATWC C+ L P E + + E V++ K+D
Sbjct: 22 VVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDA 81
Query: 164 DEQTDLALDYEVSSVPVLVAI-KNGKVQNRLVGLQDTEKRRKWIEQFASEET 12
D +D+A Y ++ P L+ +G + +D + + QF SE+T
Sbjct: 82 DTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNARDVDS----LTQFVSEKT 129
Score = 48.8 bits (111), Expect = 7e-07
Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = -1
Query: 344 NDIVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESI--IAESKGKVVLAKV 171
+++V++ S + F + V++ K V+V+F+A WC C+ L P E++ + +++ V + K+
Sbjct: 140 SNVVELDSLN-FDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKI 198
Query: 170 DIDEQTDLALDYEVSSVPVL 111
+ D D+ +EV+S P +
Sbjct: 199 NADVFADIGRLHEVASFPTI 218
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 56.4 bits (130), Expect = 3e-09
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = -1
Query: 278 VVVDFFATWCNPCRLLTPRLESIIAE-SKGKVVLAKVDIDEQTDLALDYEVSSVPVLVAI 102
+ VD +A WC PC+ ++P + ++ + K V AKV++DEQ +A V ++P V
Sbjct: 22 LAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFF 81
Query: 101 KNGKVQNRLVGLQDTEKRRK 42
+NGK + L G + K
Sbjct: 82 ENGKQIDMLTGANPQALKEK 101
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 54.4 bits (125), Expect = 1e-08
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -1
Query: 302 KVINSKVPVVVDFFATWCNPCRLLTPRLESIIAE-SKGKVVLAKVDIDEQTDLALDYEVS 126
++I + ++V F+A WC C+ L P ES E K + L +VD E+ DL +Y +
Sbjct: 34 ELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIR 93
Query: 125 SVPVLVAIKNGK 90
P L KNGK
Sbjct: 94 GYPTLNVFKNGK 105
Score = 51.6 bits (118), Expect = 9e-08
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Frame = -1
Query: 374 LRNFSLTASKNDIVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESIIAE-- 201
+++ + S+ D+V + + D+F + V++ V+V+F+A WC C+ L P E + E
Sbjct: 345 IKSQPIPESQEDLVVLVA-DNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYS 403
Query: 200 SKGKVVLAKVDIDEQTDLALDYEVSSVPVLVAIK-NGKVQN-RLVGLQDTEKRRKWIEQF 27
VV+AK+D E D+++ +S P ++ K N KV R G + E +I++
Sbjct: 404 DDSNVVVAKIDATE-NDISV--SISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDKH 460
Query: 26 ASEE 15
AS E
Sbjct: 461 ASFE 464
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 54.0 bits (124), Expect = 2e-08
Identities = 28/104 (26%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = -1
Query: 335 VKIQSTDDFKEKVINSKVPVVV-DFFATWCNPCRLLTPRLESIIAESKGKVVLAKVDIDE 159
V+I + F+E + N K +++ +F+A W PC+ + + ++K V L K++ ++
Sbjct: 3 VEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFL-KIEAEK 61
Query: 158 QTDLALDYEVSSVPVLVAIKNGKVQNRLVGLQDTEKRRKWIEQF 27
+D+A ++V++VP+ V I KV R+ G + +K + I+++
Sbjct: 62 FSDIAESFDVNAVPLFVLIHGAKVLARISG-ANPQKLKAAIDEY 104
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 39.9 bits (89), Expect = 3e-04
Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = -1
Query: 302 KVINSKVPVVVDFFATWCNPCRLLTPRLESIIAESKGKVVLAKVDIDEQTDLAL--DYEV 129
K + +K P +V F+A WC C+ L P + + + + + VD D + A+ Y+V
Sbjct: 43 KFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQV 102
Query: 128 SSVPVLVAIKNGKVQNRLVGLQ-DTEKRRKWIEQFASEETKAR 3
P + + + L + ++ K +++F S+ ++
Sbjct: 103 QGFPTIKLVYPSSKGSSLSSTDYNGDRSYKSLQKFVSDSIPSK 145
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/94 (20%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = -1
Query: 488 LLPNNLQYCI-VHCFYKMLTKNITNLFIRNSTLKKNYGFLRNFSLTASKNDIVKIQSTDD 312
L+P ++C+ + + LT + LF+ L+ N + NFS + +++D +
Sbjct: 215 LIPLTQKFCVQLQKLFADLTVSDQMLFLNQLLLEHNTKYPTNFSYSTARDDRITGSLATL 274
Query: 311 FKEKVINSKVPVVVDFFATWCNPCRLLTPRLESI 210
+ ++ +++F+ W P L+ R+E +
Sbjct: 275 LRLNFSSTHFLRLIEFY--WGVPTNLIIKRVEVV 306
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 27.5 bits (58), Expect = 1.7
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 15/141 (10%)
Frame = -1
Query: 392 KKNYGFLRNFS-LTASKNDIVKIQSTDDFKEKVINSKVPVVVDFFATWC---NPCRLLTP 225
K+N L++ L +++ D+ K T V + V D W N +
Sbjct: 1429 KRNESMLQSKRILDSAQQDVAKFVDTSQSNLDVQLISLKDVNDRKYKWKHKQNAMNKVYD 1488
Query: 224 RLESIIAESKGKVVLAKVDIDEQ------TDLALDYE-----VSSVPVLVAIKNGKVQNR 78
++S I ES + VD D + + LD E + S P ++Q +
Sbjct: 1489 LVQSAIRESSEDAIALAVDCDSEAMEKLRSTTTLDEESWKRLIESCPASQREYMQRLQKK 1548
Query: 77 LVGLQDTEKRRKWIEQFASEE 15
LV L + +K+R WI F + E
Sbjct: 1549 LVTLAEQDKKRVWICSFRTNE 1569
>SPAP8A3.14c |||mitochondrial inner membrane protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 677
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 407 RNSTLKKNYGFLRNFSLTASKNDIVKIQSTDDFKEKVI 294
++S L + GFL NFSL S + K+ S + E+ +
Sbjct: 580 QDSQLNASSGFLTNFSLKDSTDRFYKVLSYEKVSERFV 617
>SPAC1952.05 |gcn5||histone acetyltransferase
Gcn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 454
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = -1
Query: 155 TDLALDYEVSSV-----PVLVAIKNGKVQNRLVGLQDT 57
TDL +D+++SSV P ++ K+G +Q R+V DT
Sbjct: 91 TDLDVDFDISSVRVTEKPSVLEEKSGVIQFRVVSNDDT 128
>SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -1
Query: 371 RNFSLTASKNDIVKIQSTDDFKEKVINSKVPV 276
RN + + D+ Q ++F+EK++N +PV
Sbjct: 72 RNPTGDVTATDVYSSQYLNNFQEKLLNGSIPV 103
>SPBC1105.07c |||nuclear pore associated protein Thp1-Sac3 complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 442
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -1
Query: 119 PVLVAIKNGKVQNRLVGLQDTEKRRKW 39
P++ A+K+G +++ + L+D RRKW
Sbjct: 296 PLIKALKSGDIKSFRLSLED-NSRRKW 321
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 25.0 bits (52), Expect = 9.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 346 FDAVREKFLKNP*FFFNVLFRMNKLVIFLVSI 441
FD + FLKN F + L+R++ L +FL S+
Sbjct: 706 FDYDPDLFLKNIPVFVDGLYRVDYLDLFLTSL 737
>SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 25.0 bits (52), Expect = 9.2
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +1
Query: 91 FPFFIATKTGTELTS*SNAKSVCSSMSTFAK---TTLPLLSAIIDS-RRGVSSLHGL 249
FP IA E S VCS+ ST K TT L+ A + R V S+H L
Sbjct: 28 FPIKIAVDVAKEYLSTKRVALVCSARSTDTKAEGTTTRLIRATEAALRPAVGSVHDL 84
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,473,995
Number of Sequences: 5004
Number of extensions: 48578
Number of successful extensions: 151
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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