Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_K03
         (806 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1485 + 37703696-37703815,37703970-37704044,37704598-377046...    31   1.4  
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111...    29   4.4  
11_06_0027 + 19363678-19363698,19364442-19364484,19366240-193662...    28   7.6  
05_04_0301 + 19983073-19983196,19984508-19985105,19985190-199854...    28   7.6  

>01_06_1485 +
           37703696-37703815,37703970-37704044,37704598-37704699,
           37704792-37704845,37705030-37705122,37705215-37705307,
           37707150-37707254,37707356-37707454,37707558-37707899
          Length = 360

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 23/103 (22%), Positives = 42/103 (40%)
 Frame = -3

Query: 801 LVRXKPEKPLGKYLDTQLLHLPCIEKNIPDVEPALTDLPYNLLTKKPKKIPVMYGSTSKE 622
           + R     PL +    ++   P   KN+P     LT+    +  ++   +P     TS+E
Sbjct: 237 IARIFVNNPLRRITMKEIKSHPWFLKNLPR---ELTETAQAMYYRRDNSVPSFSDQTSEE 293

Query: 621 GLLIISKDNEETVSERDSKYLFASDLEFQTEEEAEKEDNKARQ 493
            + I+ +      S R   +  A   E + EEE   E+N+  +
Sbjct: 294 IMKIVQEARTMPKSSRTGYWSDAGSDEEEKEEEERPEENEEEE 336


>03_01_0141 +
           1116833-1117082,1117658-1118574,1119417-1119579,
           1119668-1120497,1120562-1120570
          Length = 722

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
 Frame = -3

Query: 543 EFQTEEEAEKEDNKARQLYFNGQRMSMNNIMNISDLMSHLYFEIPPILESEITLSTTADV 364
           E   EE+ E  +NK    + N   +SM+ + +  D M+ +  E  PI E   +  T  D 
Sbjct: 536 EGSDEEQQETSNNKKTNGFDNTAAVSMDTLKSGDDSMNSVVVE--PIKERVESSKTDVDT 593

Query: 363 AVFNYYF-------NYSGGRNFLKYLTGFKNET 286
           A   Y F       + S   +F K+L+  K +T
Sbjct: 594 AAPFYSFVKRLSGSSSSSDVDFDKFLSSIKKQT 626


>11_06_0027 +
           19363678-19363698,19364442-19364484,19366240-19366276,
           19366359-19366602,19366749-19366765,19366901-19366986,
           19367347-19367378,19367455-19367615,19367722-19367818,
           19367894-19368085,19368172-19368233,19368302-19368448,
           19368776-19369589
          Length = 650

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +2

Query: 605 DIISNPSLL-VEPYITGIFFGFFVSKLYGKSVKAGSTSGIFFSIHGKCNSW 754
           ++I+ P+ L + PY++G+     + +L+G  V  G   G  +  + K N W
Sbjct: 253 ELINFPTELDISPYMSGVVTDKHIYELFGIIVHEGGVIGGHYRSYVKTNCW 303


>05_04_0301 +
           19983073-19983196,19984508-19985105,19985190-19985442,
           19985947-19985979
          Length = 335

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
 Frame = -3

Query: 537 QTEEEAEKEDNKARQLYFNGQRMSMNNIMNISDL--MSHLYFE----IPPILESEI-TLS 379
           +T EE  +E NKAR   FNG   S+++I   SDL  +S    E     PP+ E+++ T++
Sbjct: 159 RTVEERIEEYNKARARIFNG---SISDIEGTSDLGALSVARDEPINVEPPVDENKVNTMN 215

Query: 378 TTADVAVF 355
           + + VAVF
Sbjct: 216 SRSRVAVF 223


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,884,562
Number of Sequences: 37544
Number of extensions: 340975
Number of successful extensions: 978
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)