Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_K02
(792 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB6B51 Cluster: PREDICTED: similar to mitochondr... 370 e-101
UniRef50_UPI00015B6099 Cluster: PREDICTED: similar to Mitochondr... 359 3e-98
UniRef50_Q9VXQ0 Cluster: CG8288-PA; n=7; Neoptera|Rep: CG8288-PA... 354 2e-96
UniRef50_Q5DGM0 Cluster: SJCHGC01793 protein; n=2; Schistosoma j... 206 6e-52
UniRef50_P09001 Cluster: Mitochondrial 39S ribosomal protein L3;... 204 1e-51
UniRef50_A7SQV4 Cluster: Predicted protein; n=1; Nematostella ve... 186 6e-46
UniRef50_P49404 Cluster: Putative mitochondrial 39S ribosomal pr... 177 2e-43
UniRef50_Q5KGQ8 Cluster: Ribosomal large subunit assembly and ma... 163 6e-39
UniRef50_UPI0000E48888 Cluster: PREDICTED: similar to mitochondr... 162 8e-39
UniRef50_A0D1W5 Cluster: Chromosome undetermined scaffold_34, wh... 144 2e-33
UniRef50_Q9LRN8 Cluster: 50S ribosomal protein L3-2, chloroplast... 139 6e-32
UniRef50_P31334 Cluster: 54S ribosomal protein L9, mitochondrial... 135 1e-30
UniRef50_A5CCL2 Cluster: 50S ribosomal protein L3; n=1; Orientia... 132 1e-29
UniRef50_Q54I61 Cluster: Putative uncharacterized protein; n=1; ... 126 5e-28
UniRef50_Q0CHL1 Cluster: 60S ribosomal protein L9, mitochondrial... 126 6e-28
UniRef50_Q00RY2 Cluster: Putative ribosomal protein L3; n=1; Ost... 122 1e-26
UniRef50_Q9P6P6 Cluster: Mitochondrial ribosomal protein subunit... 121 2e-26
UniRef50_Q22HG3 Cluster: Ribosomal protein L3 containing protein... 120 6e-26
UniRef50_Q6C279 Cluster: Yarrowia lipolytica chromosome F of str... 118 2e-25
UniRef50_P60454 Cluster: 50S ribosomal protein L3; n=14; Bacteri... 118 2e-25
UniRef50_Q28UW2 Cluster: 50S ribosomal protein L3; n=93; Proteob... 118 2e-25
UniRef50_Q2JFH6 Cluster: 50S ribosomal protein L3; n=53; Bacteri... 113 6e-24
UniRef50_Q6UCS0 Cluster: 50S ribosomal protein L3; n=1; uncultur... 111 3e-23
UniRef50_Q1AU29 Cluster: 50S ribosomal protein L3; n=1; Rubrobac... 110 3e-23
UniRef50_Q9SKX4 Cluster: 50S ribosomal protein L3-1, chloroplast... 108 2e-22
UniRef50_Q3YRK9 Cluster: 50S ribosomal protein L3; n=3; Anaplasm... 107 2e-22
UniRef50_Q873B3 Cluster: Related to ribosomal protein L3, mitoch... 107 3e-22
UniRef50_Q9L0E0 Cluster: 50S ribosomal protein L3; n=35; Bacteri... 106 6e-22
UniRef50_A4RTL3 Cluster: Plastid ribosomal protein L3, imported ... 106 7e-22
UniRef50_Q08TH3 Cluster: 50S ribosomal protein L3; n=2; Cystobac... 105 1e-21
UniRef50_Q5AAK4 Cluster: Likely mitochondrial ribosomal protein;... 105 2e-21
UniRef50_Q9HWD5 Cluster: 50S ribosomal protein L3; n=19; Proteob... 103 7e-21
UniRef50_Q67JU3 Cluster: 50S ribosomal protein L3; n=55; Firmicu... 102 9e-21
UniRef50_Q7WRC5 Cluster: 50S ribosomal protein L3; n=112; Bacter... 102 9e-21
UniRef50_O66431 Cluster: 50S ribosomal protein L3; n=9; Bacteria... 100 4e-20
UniRef50_Q8XHS3 Cluster: 50S ribosomal protein L3; n=7; Bacteria... 100 5e-20
UniRef50_Q3A9R6 Cluster: 50S ribosomal protein L3; n=3; Bacteria... 99 6e-20
UniRef50_P60447 Cluster: 50S ribosomal protein L3; n=85; Gammapr... 99 1e-19
UniRef50_A3EVS1 Cluster: 50S ribosomal protein L3; n=1; Leptospi... 98 2e-19
UniRef50_Q5P332 Cluster: 50S ribosomal protein L3; n=9; Bacteria... 97 3e-19
UniRef50_Q580R4 Cluster: Ribosomal protein L3 mitochondrial, put... 96 8e-19
UniRef50_Q5GSU4 Cluster: 50S ribosomal protein L3; n=6; Ricketts... 96 1e-18
UniRef50_Q6MJ15 Cluster: 50S ribosomal protein L3; n=1; Bdellovi... 96 1e-18
UniRef50_A6PR85 Cluster: 50S ribosomal protein L3; n=2; Chlamydi... 95 1e-18
UniRef50_Q3ZZM4 Cluster: 50S ribosomal protein L3; n=10; cellula... 95 2e-18
UniRef50_Q97EH8 Cluster: 50S ribosomal protein L3; n=12; Bacteri... 95 2e-18
UniRef50_A7APA8 Cluster: 50S ribosomal protein L3, putative; n=3... 94 3e-18
UniRef50_Q890N9 Cluster: 50S ribosomal protein L3; n=32; Bacteri... 92 2e-17
UniRef50_P94267 Cluster: 50S ribosomal protein L3; n=4; Borrelia... 92 2e-17
UniRef50_Q85FW3 Cluster: Chloroplast 50S ribosomal protein L3; n... 89 2e-17
UniRef50_Q7V9W2 Cluster: 50S ribosomal protein L3; n=35; cellula... 91 3e-17
UniRef50_Q7XYP4 Cluster: 50S ribosomal protein L3, chloroplast p... 91 3e-17
UniRef50_A6CGN0 Cluster: 50S ribosomal protein L3; n=2; Bacteria... 91 4e-17
UniRef50_Q7VQE8 Cluster: 50S ribosomal protein L3; n=38; Bacteri... 91 4e-17
UniRef50_Q8EUB3 Cluster: 50S ribosomal protein L3; n=6; Firmicut... 89 9e-17
UniRef50_Q6Q8Y8 Cluster: 50S ribosomal protein L3; n=1; uncultur... 89 1e-16
UniRef50_A6G3Z5 Cluster: 50S ribosomal protein L3; n=1; Plesiocy... 88 2e-16
UniRef50_Q1NYY1 Cluster: 50S ribosomal protein L3; n=4; Bacteria... 87 4e-16
UniRef50_Q9Z7Q7 Cluster: 50S ribosomal protein L3; n=9; Chlamydi... 86 1e-15
UniRef50_O83219 Cluster: 50S ribosomal protein L3; n=2; Treponem... 85 3e-15
UniRef50_P75580 Cluster: 50S ribosomal protein L3; n=4; Mycoplas... 85 3e-15
UniRef50_Q81VT0 Cluster: 50S ribosomal protein L3; n=9; Bacteria... 83 6e-15
UniRef50_Q8Y440 Cluster: 50S ribosomal protein L3; n=19; Bacteri... 82 2e-14
UniRef50_Q7UN20 Cluster: 50S ribosomal protein L3; n=2; Planctom... 81 2e-14
UniRef50_A6GV22 Cluster: 50S ribosomal protein L3; n=2; cellular... 80 5e-14
UniRef50_A5K6P7 Cluster: 50S ribosomal protein L3, putative; n=5... 80 7e-14
UniRef50_Q5FM90 Cluster: 50S ribosomal protein L3; n=31; Bacteri... 79 2e-13
UniRef50_Q2IJD0 Cluster: 50S ribosomal protein L3; n=2; Anaeromy... 79 2e-13
UniRef50_Q8KTP2 Cluster: 50S ribosomal protein L3; n=1; Candidat... 78 2e-13
UniRef50_Q4UBR8 Cluster: 50S ribosomal protein L3, putative; n=2... 78 3e-13
UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11; Bacteri... 73 6e-12
UniRef50_Q1ISC2 Cluster: 50S ribosomal protein L3; n=5; Bacteria... 72 1e-11
UniRef50_Q9TLT2 Cluster: Chloroplast 50S ribosomal protein L3; n... 72 2e-11
UniRef50_A7AWX6 Cluster: Ribosomal protein L3 domain containing ... 70 6e-11
UniRef50_Q7M8D4 Cluster: 50S ribosomal protein L3; n=23; Epsilon... 70 8e-11
UniRef50_Q8I4X7 Cluster: 50S ribosomal protein L3, putative; n=7... 66 1e-09
UniRef50_A5KRQ1 Cluster: 50S ribosomal protein L3; n=1; candidat... 61 4e-08
UniRef50_A6QCP8 Cluster: 50S ribosomal protein L3; n=2; Epsilonp... 59 1e-07
UniRef50_Q9AIN8 Cluster: 50S ribosomal protein L3; n=4; Candidat... 57 6e-07
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 56 1e-06
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 54 4e-06
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 52 2e-05
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 52 2e-05
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 50 5e-05
UniRef50_P53307 Cluster: Uncharacterized protein YGR219W; n=1; S... 49 1e-04
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 44 0.004
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 44 0.006
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 43 0.010
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 42 0.018
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 42 0.023
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 41 0.031
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 40 0.072
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 40 0.095
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 38 0.22
UniRef50_A3XPQ6 Cluster: Putative outer membrane protein, probab... 36 1.5
UniRef50_A5DTI2 Cluster: Predicted protein; n=1; Lodderomyces el... 36 1.5
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 36 1.5
UniRef50_Q4DGU3 Cluster: Helicase-like protein, putative; n=1; T... 35 2.7
UniRef50_A5WWD4 Cluster: Novel collagen protein; n=5; Danio reri... 34 3.6
UniRef50_A2FG46 Cluster: Putative uncharacterized protein; n=2; ... 34 3.6
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 34 4.7
UniRef50_A1XVT1 Cluster: Fibrillar collagen precursor; n=1; Hydr... 34 4.7
UniRef50_UPI0000E46F0A Cluster: PREDICTED: similar to G/T mismat... 33 6.2
UniRef50_Q5AG30 Cluster: Putative uncharacterized protein; n=3; ... 33 6.2
UniRef50_A7TEL2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 33 6.2
UniRef50_A4A686 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_Q1DYA1 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
>UniRef50_UPI0000DB6B51 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L3 CG8288-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to mitochondrial ribosomal protein L3
CG8288-PA - Apis mellifera
Length = 352
Score = 370 bits (911), Expect = e-101
Identities = 165/263 (62%), Positives = 208/263 (79%), Gaps = 1/263 (0%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R GLI +KIG YP+W K+G+KV TTL+Q+VDN V+KYIPPEEYKP+ ++ + K G
Sbjct: 89 RTGLIGKKIGVYPMWLKNGRKVLTTLIQIVDNEVVKYIPPEEYKPV--KPIRHRIEVKNG 146
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
C+++GA N+DP ++TK+Y GIF+ G+ PK+ L RF +SP + L GTPLYATHF+ G+
Sbjct: 147 CLVLGAINVDPQLLTKEYYGIFNKAGVTPKKVLMRFTISPNAVLQPGTPLYATHFKPGEF 206
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
IDIR KT+DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG+ ARV PGTKMPGHMG
Sbjct: 207 IDIRGKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGKLARVMPGTKMPGHMG 266
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPTQ-PF 75
NRWR L+GVKILRI+TKYNVIW L +PGE MCYL+DT+LP K++ T+P FPT
Sbjct: 267 NRWRILKGVKILRINTKYNVIWVLAQNVPGELNTMCYLYDTILPTKKS-TSPYFPTYLSN 325
Query: 74 MNDVPKEYFEDTIHPFDEPTISY 6
+++P+ + D +HPF+ PTI +
Sbjct: 326 ESELPENLYADDVHPFENPTIVF 348
>UniRef50_UPI00015B6099 Cluster: PREDICTED: similar to Mitochondrial
39S ribosomal protein L3; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Mitochondrial 39S ribosomal
protein L3 - Nasonia vitripennis
Length = 375
Score = 359 bits (884), Expect = 3e-98
Identities = 166/268 (61%), Positives = 207/268 (77%), Gaps = 6/268 (2%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
RVG++ARKIG P+W KDGKKV TT+ QV DNHVIKYIPPEEYKPMI + + G
Sbjct: 105 RVGVLARKIGIVPMWMKDGKKVLTTMFQVADNHVIKYIPPEEYKPMITQKKNPLPRNT-G 163
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
C+LVGA++ DP + TK+YCG+F+ G++PKR L RF VSPE AL GTPL+ATH+++G
Sbjct: 164 CLLVGADSCDPQLFTKEYCGLFNEAGVMPKRLLARFHVSPEGALQPGTPLFATHYKIGQY 223
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
IDIR KT+DRGFQGVMKRWGF GMPASHGVTKTHRRPGNIGSGG+KARV PGTK+PGHMG
Sbjct: 224 IDIRGKTIDRGFQGVMKRWGFHGMPASHGVTKTHRRPGNIGSGGKKARVMPGTKLPGHMG 283
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNK--TAPP-FPTQ 81
NR+R ++ +I+RI+T+YNVIW LG A GET ++ +DT++PLK K +PP FPT
Sbjct: 284 NRYRIVKAQRIVRINTRYNVIWVLGQASAGETNSLVQFYDTIVPLKTCKALNSPPHFPTY 343
Query: 80 PFMND---VPKEYFEDTIHPFDEPTISY 6
N+ +P+E F D +H F++PTI Y
Sbjct: 344 IPTNEDEVLPEELFVDDLHNFNDPTIMY 371
>UniRef50_Q9VXQ0 Cluster: CG8288-PA; n=7; Neoptera|Rep: CG8288-PA -
Drosophila melanogaster (Fruit fly)
Length = 362
Score = 354 bits (870), Expect = 2e-96
Identities = 159/265 (60%), Positives = 204/265 (76%), Gaps = 3/265 (1%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R G+IARKIG YPLW K+G+++ TTLLQ+VDNHVIKYIPPEEY P V + K+ G
Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVIKYIPPEEYLPAQVPTVANLHKR--G 156
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
CILVG+E +P+++TK+Y GIF + G+LPK++L RF+VSPE+ L GTPL HFRVGD
Sbjct: 157 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAPGTPLNVNHFRVGDF 216
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+D+R KT+D GFQGV+KR GFKGMPASHGVTKTHRR GNIG GGEK RVWPGTKMPGHMG
Sbjct: 217 VDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMG 276
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPT---Q 81
NRWR ++G+++ RI+TKYNV+W G ++ G TG + Y++DT+LP ++NK APPFPT +
Sbjct: 277 NRWRIIKGLRVWRINTKYNVMWVQGSSVAGPTGGLVYIYDTILPTRKNKEAPPFPTFYGE 336
Query: 80 PFMNDVPKEYFEDTIHPFDEPTISY 6
P D ++E +H F +I+Y
Sbjct: 337 P-QQDGDDVWYEQ-VHNFKSESITY 359
>UniRef50_Q5DGM0 Cluster: SJCHGC01793 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01793 protein - Schistosoma
japonicum (Blood fluke)
Length = 391
Score = 206 bits (502), Expect = 6e-52
Identities = 119/272 (43%), Positives = 158/272 (58%), Gaps = 16/272 (5%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMI------------K 648
R GLIA K+G YPLW K G+K+ T+ QV DNH ++Y PP E I K
Sbjct: 94 RCGLIAIKLGVYPLWTKTGEKMDCTVFQVPDNHALRYTPPSEIDKYISLLHPRHYWLNSK 153
Query: 647 SNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGT 468
W+ ++++G LVGA + D + G+ PKR + RF+VSP++AL GT
Sbjct: 154 RPPSWITQKRWGIQLVGAFSADLLNSLLNGVAYLKEAGVPPKRKISRFLVSPDAALKPGT 213
Query: 467 PLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGN-IGSGGEKA 291
PL HFRVGD +DI ++T++RGFQGV++RWG KG PA+HG TK HRR G+ G GG A
Sbjct: 214 PLSVHHFRVGDYLDITARTINRGFQGVIERWGMKGGPAAHGSTKFHRRMGSAAGCGGPIA 273
Query: 290 RVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKR 111
R G +MPG MGNR+R+LRGV I+RI+ K +I+ G A PG A C L D+ L ++
Sbjct: 274 R---GKRMPGVMGNRFRSLRGVMIVRINPKLGLIYVPG-ATPGPVHAYCLLHDSWLANRQ 329
Query: 110 NK---TAPPFPTQPFMNDVPKEYFEDTIHPFD 24
+ PP PT +P E H FD
Sbjct: 330 RRLDANPPPVPT-----CIPSIVNESNSHQFD 356
>UniRef50_P09001 Cluster: Mitochondrial 39S ribosomal protein L3;
n=31; Deuterostomia|Rep: Mitochondrial 39S ribosomal
protein L3 - Homo sapiens (Human)
Length = 348
Score = 204 bits (499), Expect = 1e-51
Identities = 108/266 (40%), Positives = 157/266 (59%), Gaps = 4/266 (1%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
RVGLIA K+G PLW KDG+K TLLQV D HV+KY E K
Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNG------------KMA 143
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
+ VG + + + +G+ PK+ + F ++ +A+ GTPLYA HFR G
Sbjct: 144 TLSVGGKTVSRFRKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQY 203
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+D+ +KT+ +GFQGVMKRWGFKG PA+HG TKTHRRPG + + G+ RVWPGTKMPG MG
Sbjct: 204 VDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMG 262
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLP----LKRNKTAPPFPT 84
N +RT G+K+ RI+TK+N+I+ G ++PG + + D+ LP L +N P +
Sbjct: 263 NIYRTEYGLKVWRINTKHNIIYVNG-SVPGHKNCLVKVKDSKLPAYKDLGKNLPFPTYFP 321
Query: 83 QPFMNDVPKEYFEDTIHPFDEPTISY 6
++P++ +++ + P+I++
Sbjct: 322 DGDEEELPEDLYDENVCQPGAPSITF 347
>UniRef50_A7SQV4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 264
Score = 186 bits (453), Expect = 6e-46
Identities = 105/265 (39%), Positives = 149/265 (56%), Gaps = 3/265 (1%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R G + K+G LW KDG+++ TL+Q+ D V++ + + E Q
Sbjct: 8 RTGAVGVKLGMSALWLKDGRRLPVTLIQIKDCEVVQARVAKGHG----GRDPQTELQ--- 60
Query: 611 CILVGAEN-IDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGD 435
VGA N ++ + + K G F + PKR +C F V+P++ L GTP+ A HF G
Sbjct: 61 ---VGAVNKLELNQIGKAQFGHFKRFSVRPKRKVCSFPVTPDALLTPGTPITAAHFYPGQ 117
Query: 434 CIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHM 255
+ I+ T D+GFQGVMKRWG G PASHG +KTHR+ G G G + RVWPG KM GHM
Sbjct: 118 YVKIQGVTKDKGFQGVMKRWGMGGQPASHGQSKTHRKMGATGGGQDPGRVWPGKKMAGHM 177
Query: 254 GNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPTQPF 75
GN+ TL V++ RI+TKYNV++ G PG TG + D KR+ APPFPT
Sbjct: 178 GNKNCTLHAVRVHRINTKYNVLYVQG-QCPGPTGGFLKISDA---WKRHPHAPPFPTHMD 233
Query: 74 MND--VPKEYFEDTIHPFDEPTISY 6
+ + ++ + + I F+E +I+Y
Sbjct: 234 EPEKALEEDLYAENIQRFNEESINY 258
>UniRef50_P49404 Cluster: Putative mitochondrial 39S ribosomal
protein L3; n=2; Caenorhabditis|Rep: Putative
mitochondrial 39S ribosomal protein L3 - Caenorhabditis
elegans
Length = 403
Score = 177 bits (432), Expect = 2e-43
Identities = 102/249 (40%), Positives = 141/249 (56%), Gaps = 3/249 (1%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEE-YKPMIKSNVKWVEKQ-K 618
RVGL+ RKIG P W +G ++ T+L+V +NHV+ PE YK K +
Sbjct: 102 RVGLVVRKIGMLPQWTNEGNRILCTVLEVDENHVVSITSPEAWYKSSAVGKRKAFNRHGP 161
Query: 617 YGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPN-GTPLYATHFRV 441
+ VGA N DP+ T Y F G+ K L F+V+ E ALP+ G PL A HF V
Sbjct: 162 MWRVTVGAGNDDPTKYTLGYRRQFVRAGIPVKEKLGCFLVT-EDALPSAGQPLDARHFGV 220
Query: 440 GDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPG 261
G + KT+D GFQG M RWG +G P + TK+HRR G++GS G+ AR+WPG +MPG
Sbjct: 221 GQYVTATGKTIDWGFQGGMHRWGMRGQP-TRRTTKSHRRIGSVGSVGD-ARIWPGKRMPG 278
Query: 260 HMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPTQ 81
HMG WRT+ G++I+RI+ VI+ G ++PG+ G L D + KR K+ P
Sbjct: 279 HMGYEWRTVSGLEIVRINVDKQVIYVKG-SVPGDIGETILLKDCLQEEKRLKSGPMPTWA 337
Query: 80 PFMNDVPKE 54
P + + +E
Sbjct: 338 PSLETIEEE 346
>UniRef50_Q5KGQ8 Cluster: Ribosomal large subunit assembly and
maintenance-related protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal large subunit
assembly and maintenance-related protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 308
Score = 163 bits (395), Expect = 6e-39
Identities = 89/221 (40%), Positives = 121/221 (54%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R GLIARK G LW DG++ T+LQV N V+++ PP P Y
Sbjct: 44 RTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSP-------------YH 90
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
+ +GA TK G F G+ PK L F VS ++ +P GT L A HF G
Sbjct: 91 TLQIGASPRREKTTTKQQLGHFKKAGVEPKYRLKEFQVSEDAVVPVGTELSAGHFVPGQF 150
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+D++ T+ +GFQGVMKR GF+G+ ASHG + HR PG+IG + RV PG KMPGHMG
Sbjct: 151 VDVQGVTIGKGFQGVMKRHGFRGLKASHGTSVKHRSPGSIGQNQDPGRVIPGKKMPGHMG 210
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDT 129
N RT + + I R+D N+++ G +PG + Y+ D+
Sbjct: 211 NVTRTTQNLLIHRVDHVLNLLYVRG-CVPGSDDSFLYVKDS 250
>UniRef50_UPI0000E48888 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L3; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L3 - Strongylocentrotus purpuratus
Length = 343
Score = 162 bits (394), Expect = 8e-39
Identities = 99/263 (37%), Positives = 143/263 (54%), Gaps = 1/263 (0%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R G+IA K+G PLW K+GK+V TTLLQV++ +VI + P + ++ G
Sbjct: 114 RAGVIAIKLGMQPLWTKEGKRVPTTLLQVLECNVIDFHP---------QGLNGSDRP--G 162
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
+LV A+N P ++Y +F SV + K H+ F V+ +AL GTPLYA HFR G
Sbjct: 163 TVLVAAKNAPPYYKDEEYADLFKSVCLPVKEHITSFNVTDNAALQPGTPLYAAHFRPGMY 222
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+DI +KT+D+GFQGVMKRWG KG PASHG TKTHR+ G G GG
Sbjct: 223 VDIAAKTIDKGFQGVMKRWGMKGQPASHGATKTHRKMGGSGGGG---------------- 266
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVL-PLKRNKTAPPFPTQPF 75
+LR++TK+N+++ G I G + D+ L P+ PPFPT
Sbjct: 267 ----------VLRVNTKHNILYVKG-TIHGRNLGFVKVKDSHLHPVSE---MPPFPTYYP 312
Query: 74 MNDVPKEYFEDTIHPFDEPTISY 6
++ ++ ++++H F +I Y
Sbjct: 313 EEEIEEDLMDESLHNFSHASIEY 335
>UniRef50_A0D1W5 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 409
Score = 144 bits (349), Expect = 2e-33
Identities = 89/260 (34%), Positives = 137/260 (52%), Gaps = 2/260 (0%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R GLIA K+G W K G + + T+LQ+ +N V++ V+ Y
Sbjct: 150 RAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVVQV----------------VKNDTYT 193
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
+ +GA ++ + K G F + PK+++ F ++PE+ LP G L A HF G
Sbjct: 194 GLQIGAGRVNIKTLKKPQIGHFLKANIPPKKYIKEFPITPENTLPVGFMLTARHFTPGQY 253
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
IDI+ + +GF G +KR FK PA+HG + HR+ G+ G + RV+ G KMPGH+G
Sbjct: 254 IDIQGISTGKGFGGTVKRHNFKTQPATHGNSLCHRQLGSTGQRQDPGRVFKGKKMPGHLG 313
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPTQPFM 72
N T G++I RID +I+ G ++PG+ G++ YL D+ K+NK FPT
Sbjct: 314 NDKVTCEGIQIYRIDAVRQLIYIKG-SVPGKPGSIVYLRDSWKAQKKNKELLNFPTLAVE 372
Query: 71 NDVPKEYFEDTI--HPFDEP 18
N KEY ++ + P ++P
Sbjct: 373 NG--KEYAKEIVMEAPLEDP 390
>UniRef50_Q9LRN8 Cluster: 50S ribosomal protein L3-2, chloroplast
precursor; n=6; Magnoliophyta|Rep: 50S ribosomal protein
L3-2, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 324
Score = 139 bits (337), Expect = 6e-32
Identities = 87/236 (36%), Positives = 121/236 (51%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R G+IA K G LW K GK++ ++L V DN I S VK VEK+
Sbjct: 76 RTGIIAVKCGMTALWDKWGKRIPISILWVDDN--------------IVSQVKTVEKEGIF 121
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
+ +G P ++K G F + G+ KR L F V+ ++ LP GT L HF G
Sbjct: 122 ALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGVRHFVPGQY 181
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+D+ T +GFQG MKR GF GMPASHG + +HR G+ G +V+ G KM G MG
Sbjct: 182 VDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMG 241
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPT 84
RT++ V + +ID N++W G +PG G ++ D K + + PFPT
Sbjct: 242 ADQRTVKNVWVYKIDPARNLMWVRG-QVPGAEGNFVFIKDAWCK-KPDISKLPFPT 295
>UniRef50_P31334 Cluster: 54S ribosomal protein L9, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 54S ribosomal
protein L9, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 269
Score = 135 bits (326), Expect = 1e-30
Identities = 83/224 (37%), Positives = 119/224 (53%), Gaps = 2/224 (0%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKD-GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKY 615
R GLI RK G P + K G++ + T+L+V + VI + + E Y
Sbjct: 58 RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMH--------------RTSEVNGY 103
Query: 614 GCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESAL-PNGTPLYATHFRVG 438
VG + S V++ G F S + PK H+ F V E L P GT L + F+ G
Sbjct: 104 FACQVGYGSRHLSKVSRQMLGHFASKVVNPKEHVAEFRVKDEKGLIPPGTLLKPSFFKEG 163
Query: 437 DCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGH 258
+D+RS + +GF GVMKR+GFKG+ ASHG + HR G+ G + RV PG KMPGH
Sbjct: 164 QYVDVRSVSKGKGFTGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGH 223
Query: 257 MGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 126
MGN T++ VK+L++D + NVIW G ++ G + + D +
Sbjct: 224 MGNEHVTIQNVKVLKVDDENNVIWVKG-SVAGPKNSFVKIQDAI 266
>UniRef50_A5CCL2 Cluster: 50S ribosomal protein L3; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L3 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 229
Score = 132 bits (319), Expect = 1e-29
Identities = 77/225 (34%), Positives = 125/225 (55%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R GLIA K+G + + G+KV+ TLL+V V+ + K V K Y
Sbjct: 18 RSGLIAEKLGMSSKFDESGRKVAITLLKVDVCQVLWH--------------KLVSKDGYN 63
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
+++G +NI P V K IF + PK + F V+ + L + L A++FRVG
Sbjct: 64 AVILGYKNISPFKVKKPMHSIFSRAKIEPKAIIKEFKVAEDKMLEIASILDASYFRVGQY 123
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+D+R T+ +GF G MKR GF+G+ ASHGV+ +HR G+ G+ R + KM GHMG
Sbjct: 124 VDVRGVTIGKGFAGAMKRHGFRGLEASHGVSISHRSHGSTGNRAYPGRTFKNKKMAGHMG 183
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPL 117
R+ T++ +++ +D + ++ G +IPG++G++ Y+ D++ L
Sbjct: 184 VRFATIQNLRVDSVDLEKRLLVIQG-SIPGKSGSIVYITDSIKKL 227
>UniRef50_Q54I61 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 351
Score = 126 bits (305), Expect = 5e-28
Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 2/262 (0%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
RVG I +K+G + D T++Q+ +N V + K + V ++
Sbjct: 66 RVGAIGKKVGMLTTYIGD-IAYPVTVIQLPNNQVT------QIKRKVNDGVDMIQ----- 113
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESA-LPNGTPLYATHFRVGD 435
VGA+ I V+K G F + PKR L F V+ + L GTP+ HF G
Sbjct: 114 ---VGADEIKLKNVSKTLQGHFAKANVPPKRVLMEFRVTRNAMNLELGTPILPKHFLPGQ 170
Query: 434 CIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHM 255
I ++ +GF G MKRW F G PA+HGV+ THR G+ G RV+ G KMPG +
Sbjct: 171 LITVKGTNTGKGFAGGMKRWHFSGQPATHGVSLTHRAIGSTGCRQTPGRVFKGRKMPGRL 230
Query: 254 GNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPTQ-P 78
G + T++ +++L+I+T+ N + G A+PG+ G YL T + K APPFPT P
Sbjct: 231 GGKSCTVKNLQVLKINTEMNCLLVKG-AVPGKKGG--YLKITDSRSMKWKEAPPFPTYFP 287
Query: 77 FMNDVPKEYFEDTIHPFDEPTI 12
++D+ K+ E P + TI
Sbjct: 288 TLDDMIKDE-ELVFRPATKETI 308
>UniRef50_Q0CHL1 Cluster: 60S ribosomal protein L9, mitochondrial;
n=11; Eukaryota|Rep: 60S ribosomal protein L9,
mitochondrial - Aspergillus terreus (strain NIH 2624)
Length = 335
Score = 126 bits (304), Expect = 6e-28
Identities = 70/166 (42%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Frame = -2
Query: 617 YGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESAL-PNGTPLYATHFRV 441
Y + VGA PS VTK G F + G+ PKRH+ F V E+ L P G + A+ FR
Sbjct: 159 YYAVQVGAGWKHPSNVTKSLLGHFSAHGVSPKRHVFEFRVRDEAGLLPVGRDIPASWFRE 218
Query: 440 GDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIG-SGGEKARVWPGTKMP 264
G +D RS T +GF GVMKR GF G SHGV+ THR G+ G S G +RV+PG KM
Sbjct: 219 GQFVDARSTTKGKGFAGVMKRHGFGGQDRSHGVSLTHRSMGSAGPSQGGGSRVYPGKKMA 278
Query: 263 GHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 126
G+MGN T++ +K+L++D + ++ G A+ G G + + D +
Sbjct: 279 GNMGNEQNTVQNLKVLKVDPENGIVVVQG-AVSGPKGCVVRIQDAI 323
>UniRef50_Q00RY2 Cluster: Putative ribosomal protein L3; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein L3 -
Ostreococcus tauri
Length = 312
Score = 122 bits (293), Expect = 1e-26
Identities = 69/178 (38%), Positives = 91/178 (51%)
Frame = -2
Query: 617 YGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVG 438
Y + +G VTK G F G KR L F VS L GT + A HF G
Sbjct: 106 YDAVQIGYGARKAKGVTKAELGHFVRHGSGIKRGLKEFRVSRCGTLTPGTVITAAHFAAG 165
Query: 437 DCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGH 258
+D+ T +GFQG MKRWGF G PA+HG TK HR G+IG + RV+ G KM G
Sbjct: 166 QYVDVGGTTKGKGFQGPMKRWGFAGQPATHGNTKKHRAHGSIGQCQDPGRVFKGKKMAGR 225
Query: 257 MGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPT 84
MG R RT++ + ++DT+ N+++ G IPG G + D + + PFPT
Sbjct: 226 MGGRRRTVQSAYVWKVDTERNLLYIKG-QIPGGAGTAVTIRDALRKPPKLGEQVPFPT 282
>UniRef50_Q9P6P6 Cluster: Mitochondrial ribosomal protein subunit
L9; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit L9 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 121 bits (291), Expect = 2e-26
Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Frame = -2
Query: 644 NVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTP 465
+V+ EK Y + VG+ P +TK G F S + PK H+ F V S L +
Sbjct: 79 DVRTKEKHGYYAVQVGSGIRKPKSITKAEQGNFFSHNIYPKMHVREFRVRDASGLVSPGT 138
Query: 464 LYAT-HFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKAR 288
++ T +F+ +D++ T +GF GVMKRWGF G ASHG + +HR PG+ G +R
Sbjct: 139 IFTTDYFKPKQYVDVKGITKGKGFAGVMKRWGFSGGNASHGASLSHRTPGSTGQNTTPSR 198
Query: 287 VWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 126
V PG KM GHMG+R RT++ + + +D I G +IPG + Y+ DT+
Sbjct: 199 VLPGRKMAGHMGHRSRTVKNLLVWAVDADLECILVKG-SIPGPNKSAVYVTDTI 251
>UniRef50_Q22HG3 Cluster: Ribosomal protein L3 containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Ribosomal
protein L3 containing protein - Tetrahymena thermophila
SB210
Length = 488
Score = 120 bits (288), Expect = 6e-26
Identities = 73/236 (30%), Positives = 117/236 (49%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R G++ K+G +W K GK + T++Q+ V++ VK EK
Sbjct: 234 RTGILGYKLGMTSIWDKWGKLHALTVIQIDRCQVVQ--------------VKTEEKDGVN 279
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
+ +G + K G + PKRHL F VSP+ LP G L A HF G
Sbjct: 280 ALQLGVGEKSLKRINKPTIGHLMKNDIPPKRHLKEFKVSPDCFLPAGYMLSARHFVPGQY 339
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+DI+ ++ +GF G +KRW FK A+HG + +HR PG+ G + RV+ KM GHMG
Sbjct: 340 VDIQGISVGKGFAGTVKRWNFKMQDATHGNSLSHRAPGSTGQRQDPGRVFKNKKMAGHMG 399
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPT 84
T+ +++ +ID + ++++ G +PG+ G++ + D +N+ FPT
Sbjct: 400 CEKVTIMDLQVYKIDVERSLVYIRG-HVPGKPGSLVQIRDAFKKQVQNEQFLNFPT 454
>UniRef50_Q6C279 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 277
Score = 118 bits (284), Expect = 2e-25
Identities = 62/172 (36%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Frame = -2
Query: 638 KWVEKQKYGCILVGAENIDPSV--VTKDYCGIFDSVGMLPKRHLCRFVV-SPESALPNGT 468
K EK Y + VG + + ++ + K G F + + PK+ + F + + LP T
Sbjct: 85 KTEEKHGYNAVQVGMGHRNKALQKMNKSKLGQFSAATVNPKQAVAEFRIRGKDGLLPITT 144
Query: 467 PLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKAR 288
+ A+HF+VG +D+++ + +GF GVMKR GF G+PASHGV+ HR G G + R
Sbjct: 145 EITASHFKVGQYVDVQATSKGKGFSGVMKRHGFSGLPASHGVSLKHRSGGTTGQNTDPGR 204
Query: 287 VWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFD 132
V+PG KM G+MGN TL+ K+L +D ++ G+ +PG G + L D
Sbjct: 205 VFPGRKMAGNMGNETVTLKNQKVLSVDEDTGIVIVKGM-VPGSKGKIVKLSD 255
>UniRef50_P60454 Cluster: 50S ribosomal protein L3; n=14;
Bacteria|Rep: 50S ribosomal protein L3 - Geobacter
sulfurreducens
Length = 210
Score = 118 bits (284), Expect = 2e-25
Identities = 73/222 (32%), Positives = 113/222 (50%)
Frame = -2
Query: 785 GLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCI 606
GLIA+K+G ++ +DGK++ T++Q P + K Y I
Sbjct: 4 GLIAKKLGMTQIFAEDGKRIPVTVVQA--------------GPCVVLQKKTSATDGYDAI 49
Query: 605 LVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCID 426
VG + + VTK G + G H+ F + G + A F VG+ ID
Sbjct: 50 QVGFLSQEARKVTKPMLGHIKAAGQGAFAHIREFRLDDVDRYNVGDVISADAFEVGEYID 109
Query: 425 IRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 246
+ ++ +GFQGV+KRWGF+G +SHG + HR PG+IGS +RV+ KMPG +GN
Sbjct: 110 VTGTSIGKGFQGVIKRWGFRGGRSSHG-SCFHRAPGSIGSSAYPSRVFKNKKMPGQLGNE 168
Query: 245 WRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLP 120
T++ ++++R+D N++ G AIPG + + DTV P
Sbjct: 169 RVTVQRLQVVRVDAADNILLIKG-AIPGAKNGIVLVKDTVKP 209
>UniRef50_Q28UW2 Cluster: 50S ribosomal protein L3; n=93;
Proteobacteria|Rep: 50S ribosomal protein L3 -
Jannaschia sp. (strain CCS1)
Length = 290
Score = 118 bits (283), Expect = 2e-25
Identities = 74/233 (31%), Positives = 113/233 (48%), Gaps = 1/233 (0%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R G+IA+K+G L+ +DGK++ T+LQ+ V+ K + Y
Sbjct: 3 RSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAK--------------KTSDSDGYS 48
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
+ +GA + G+F + PKR L F V ++ + G + A H+ G
Sbjct: 49 AVQLGAGTAKAKRTSAPMRGVFAKASVEPKRKLVEFRVDADNLIEVGEEIIADHYFEGQF 108
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+D+ ++ +GFQG MKR F G+ ASHGV+ +HR G+ G + RV+ G KM GHMG
Sbjct: 109 VDVTGTSIGKGFQGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMG 168
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV-LPLKRNKTAP 96
T + ++I+R DT +I G A+PG G + D V P N P
Sbjct: 169 AARVTTQNLQIVRTDTDRGLIMIKG-AVPGSKGGWVTVKDAVKKPFPENAILP 220
>UniRef50_Q2JFH6 Cluster: 50S ribosomal protein L3; n=53;
Bacteria|Rep: 50S ribosomal protein L3 - Frankia sp.
(strain CcI3)
Length = 235
Score = 113 bits (271), Expect = 6e-24
Identities = 62/197 (31%), Positives = 96/197 (48%)
Frame = -2
Query: 737 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 558
G K+ T + +N V+ + + P + + VK + Y + +G +DP + K
Sbjct: 11 GTKLGMTQVWDANNRVVP-VTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEVDPRKINKPA 69
Query: 557 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 378
G F + G+ P+RHL + G L F G +D+ + +GF GVMKR
Sbjct: 70 RGHFATSGVTPRRHLVELRTADAGNYRPGQELTGEVFSAGTVVDVTGTSKGKGFAGVMKR 129
Query: 377 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 198
GFKG+ A HGV + HR PG++G RV+ G +M G MG+ T G+ I +DT+
Sbjct: 130 HGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHVRTTTSGLTIHAVDTER 189
Query: 197 NVIWTLGVAIPGETGAM 147
+ G A+PG G +
Sbjct: 190 GYLLVRG-AVPGPDGGL 205
>UniRef50_Q6UCS0 Cluster: 50S ribosomal protein L3; n=1; uncultured
marine alpha proteobacterium HOT2C01|Rep: 50S ribosomal
protein L3 - uncultured marine alpha proteobacterium
HOT2C01
Length = 229
Score = 111 bits (266), Expect = 3e-23
Identities = 69/222 (31%), Positives = 113/222 (50%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R G+IA+KIG L+ + G + T+L V + +I + E +
Sbjct: 2 RSGIIAKKIGMSNLYTQSGTNIPVTVLHVENCKIIDRVTSEN--------------ENSD 47
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
+LVGA + + K G FD ++L F +S + + +G L A+HF+ G
Sbjct: 48 KVLVGACKLKKT--KKSQKGFFDKKKTDAYKYLREFEISKDQEIKSGDELKASHFKEGQF 105
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
ID+ T +GF GVMKR F G+ ASHGV+ +HR G+ G + +V+ G KM G G
Sbjct: 106 IDVSGYTKGKGFAGVMKRHNFSGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGQYG 165
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 126
+ +TL+ ++++++D + N+I G A PG G + D++
Sbjct: 166 DVHKTLQSLQVVKVDEQKNLICVKG-ATPGSRGTWLVVEDSI 206
>UniRef50_Q1AU29 Cluster: 50S ribosomal protein L3; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: 50S ribosomal protein L3 -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 205
Score = 110 bits (265), Expect = 3e-23
Identities = 59/175 (33%), Positives = 99/175 (56%), Gaps = 1/175 (0%)
Frame = -2
Query: 668 EYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFV-VSP 492
E +P + + VK EK Y + VG + V + + G+F + + P+R+L VS
Sbjct: 29 EVEPNVVTAVKTAEKDGYEAVQVGFGAVKSGRVNRPHAGVFAKLDIPPRRYLRELRGVSG 88
Query: 491 ESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI 312
E G + A F GD + + +++ RGFQG +KR GF P +HG + R+PG++
Sbjct: 89 EV----GQTIGADAFEAGDRVHVSARSKGRGFQGTVKRHGFGRGPVTHG-SHNIRQPGSV 143
Query: 311 GSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAM 147
G+ + +R++ G +MPGHMG+R T+R ++++R+D + N IW G +PG A+
Sbjct: 144 GASADPSRIFKGQRMPGHMGDRSVTVRNLEVVRVDAERNEIWVRG-GVPGGRNAI 197
>UniRef50_Q9SKX4 Cluster: 50S ribosomal protein L3-1, chloroplast
precursor; n=15; cellular organisms|Rep: 50S ribosomal
protein L3-1, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 271
Score = 108 bits (259), Expect = 2e-22
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 1/213 (0%)
Frame = -2
Query: 788 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGC 609
+G++ K+G + +DG V T++ + +++ + +K + Y
Sbjct: 56 IGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIV-------------TQIKTLATDGYDA 102
Query: 608 ILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRF-VVSPESALPNGTPLYATHFRVGDC 432
+ +G + +TK G G +P RHL F + + E PN ++ F+ GD
Sbjct: 103 VQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDL 162
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+D+ T+ +GFQG +KR FK +HG +K+HR G+IG+G RV+ G KMPG MG
Sbjct: 163 VDVAGTTIGKGFQGGIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMG 221
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 153
+R +KI+++D + NV+ G A+PG+ G
Sbjct: 222 GTRTKIRKLKIVKVDKELNVVMIKG-ALPGKPG 253
>UniRef50_Q3YRK9 Cluster: 50S ribosomal protein L3; n=3;
Anaplasmataceae|Rep: 50S ribosomal protein L3 -
Ehrlichia canis (strain Jake)
Length = 231
Score = 107 bits (258), Expect = 2e-22
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 1/223 (0%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R+GL K+G+ ++ +GK++ TLL + D+ +I + K + Y
Sbjct: 4 RIGLFLEKVGHTAIFDNEGKRIPVTLLHLRDSFII--------------STKTKDINGYN 49
Query: 611 CILVGAENIDPSV-VTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGD 435
+++G E+ SV + K I + + K + V + G + THF
Sbjct: 50 AVVLGVES---SVNIKKPQLKILEKSNITAKCRIFESRVDNLDGIVKGAKISITHFVENQ 106
Query: 434 CIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHM 255
ID+ ++ +GF GVMKR FKG+ ASHGV+ HR G+ G + RV+ G KM GH+
Sbjct: 107 YIDVTGYSLGKGFAGVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGHL 166
Query: 254 GNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 126
G+ T++ +K++ +D + +++ G IPG G+ ++ D V
Sbjct: 167 GSSKVTVQNLKVILVDQERSLLVVKGNNIPGAKGSYVFVKDAV 209
>UniRef50_Q873B3 Cluster: Related to ribosomal protein L3,
mitochondrial; n=6; Pezizomycotina|Rep: Related to
ribosomal protein L3, mitochondrial - Neurospora crassa
Length = 384
Score = 107 bits (257), Expect = 3e-22
Identities = 66/180 (36%), Positives = 92/180 (51%), Gaps = 2/180 (1%)
Frame = -2
Query: 626 KQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVV-SPESALPNGTPLYATH 450
K Y + VG V G +++ G+ PK+ L F V + + LP G L+
Sbjct: 148 KNGYWAVQVGLGERRAENVGAPQLGYYEAKGIPPKQTLAEFKVRNQDGLLPVGVQLFPDW 207
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI-GSGGEKARVWPGT 273
F VG +D+R T GF G MKR GF G ASHG + HR G++ GS G +RV PG
Sbjct: 208 FHVGQVVDVRGITRGMGFAGGMKRHGFAGQEASHGNSLNHRTIGSVGGSQGSGSRVLPGK 267
Query: 272 KMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPP 93
KMPG MG + T++ + IL +D + ++ G A+ G GA+ + D V K APP
Sbjct: 268 KMPGRMGAQQHTVQNLPILMVDNELGIVVVKG-AVAGHKGAVVKVQDAV------KKAPP 320
>UniRef50_Q9L0E0 Cluster: 50S ribosomal protein L3; n=35;
Bacteria|Rep: 50S ribosomal protein L3 - Streptomyces
coelicolor
Length = 214
Score = 106 bits (255), Expect = 6e-22
Identities = 61/197 (30%), Positives = 96/197 (48%)
Frame = -2
Query: 737 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 558
G+K+ T + +N V+ + + P + + V+ + Y + + IDP V K
Sbjct: 10 GEKLGMTQVWDENNRVVP-VTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPL 68
Query: 557 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 378
G F + P+RHL + S G + A F G +D+ +K+ +GF GVMKR
Sbjct: 69 KGHFAKADVTPRRHLVEIRTAAASEYTLGQEITAEAFESGVKVDVTAKSKGKGFAGVMKR 128
Query: 377 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 198
FKG ASHG + HR PG+IG RV+ G +M G MGN T + + + +D +
Sbjct: 129 HNFKGGKASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAVDAEK 188
Query: 197 NVIWTLGVAIPGETGAM 147
++ G A+PG G +
Sbjct: 189 GLLLIKG-AVPGPNGGL 204
>UniRef50_A4RTL3 Cluster: Plastid ribosomal protein L3, imported to
chloroplast, large ribosomal subunit; n=2;
Ostreococcus|Rep: Plastid ribosomal protein L3, imported
to chloroplast, large ribosomal subunit - Ostreococcus
lucimarinus CCE9901
Length = 241
Score = 106 bits (254), Expect = 7e-22
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
Frame = -2
Query: 788 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGC 609
VG K G ++ DG V T++ V D +V+ + VK Y
Sbjct: 25 VGAFGSKAGMTQVFTDDGLCVPVTVIAVRDGNVV-------------TQVKTEATDGYNA 71
Query: 608 ILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATH-FRVGDC 432
+ VG + + +TK G G RHL F + G + T F+ GD
Sbjct: 72 VQVGYDAVRDDKLTKPELGHCKKAGAPALRHLEEFRLRDAPTYEVGAQIKPTELFKEGDK 131
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+D+R +T+ +GFQG +KR+GF +HG +K+HR+ G+IGSG R++PG +M GHMG
Sbjct: 132 VDVRGRTIGKGFQGAVKRYGFSRGLMTHG-SKSHRQHGSIGSGTNPGRIYPGKRMHGHMG 190
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMC 144
N T +G+ ++ ++ + I G +PG+ GA+C
Sbjct: 191 NEMVTTKGLTVVSVED--DCIIVKG-NVPGKKGALC 223
>UniRef50_Q08TH3 Cluster: 50S ribosomal protein L3; n=2;
Cystobacterineae|Rep: 50S ribosomal protein L3 -
Stigmatella aurantiaca DW4/3-1
Length = 259
Score = 105 bits (252), Expect = 1e-21
Identities = 70/223 (31%), Positives = 103/223 (46%), Gaps = 3/223 (1%)
Frame = -2
Query: 785 GLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCI 606
GLI +KIG ++ +G V T++ V V+ P EK +Y +
Sbjct: 39 GLIGKKIGMTQVFNDEGNLVPVTVVDVSTCQVVGKRTP--------------EKDQYSAV 84
Query: 605 LVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESA--LPNGTPLYATHFRVGDC 432
+G I V+ + G F +RHL F V+PE A G + A F G
Sbjct: 85 TLGFGEIREKVLNQAQRGFFKKNSAALRRHLKEFRVTPEDAAQFNVGDAVKADLFTKGQL 144
Query: 431 IDIRSKTMDRGFQGVMKRWGFKG-MPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHM 255
+D+ T RGF GVM+RW FKG +HG + R PG IG R +P KMPGH
Sbjct: 145 VDVTGTTKGRGFSGVMRRWSFKGSQTKTHGTHEYQRHPGAIGQRKTPGRTYPNKKMPGHY 204
Query: 254 GNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 126
G T + + ++ +DT+ ++ G A+PG A+ Y+ +V
Sbjct: 205 GVEQVTTQNLTVVDVDTEKGLLLIKG-AVPGHNDAIVYVRPSV 246
>UniRef50_Q5AAK4 Cluster: Likely mitochondrial ribosomal protein;
n=4; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 293
Score = 105 bits (251), Expect = 2e-21
Identities = 71/228 (31%), Positives = 113/228 (49%), Gaps = 6/228 (2%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R GL A K G + + G+ + T+L+V V+ Y K + Y
Sbjct: 66 RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGY--------------KLFKDFGYT 111
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSP-----ESAL-PNGTPLYATH 450
+++G + +V + + IF++ + PK+ + F + ES L P GT L A +
Sbjct: 112 AVIMGTIDKLKNVKSTNDLRIFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADY 171
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 270
F VG +D++ T +GF GVMKRWGF G A+HG +K HR PG G RV+PG K
Sbjct: 172 FSVGQKVDVKGVTKGKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKK 231
Query: 269 MPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 126
MPG MG++ T +++L D + ++ G +PG ++ + D +
Sbjct: 232 MPGRMGHQNNTGFNLEVLHTDGEAGILIVKG-NVPGPKKSIIKVSDAI 278
>UniRef50_Q9HWD5 Cluster: 50S ribosomal protein L3; n=19;
Proteobacteria|Rep: 50S ribosomal protein L3 -
Pseudomonas aeruginosa
Length = 211
Score = 103 bits (246), Expect = 7e-21
Identities = 62/212 (29%), Positives = 104/212 (49%)
Frame = -2
Query: 788 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGC 609
+G++ RK G ++ ++G + T+++V N V ++ K E Y
Sbjct: 3 IGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQF--------------KTEETDGYRA 48
Query: 608 ILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCI 429
+ V A S VTK G F + R + F + E G + F+ G +
Sbjct: 49 VQVTAGERRASRVTKAQAGHFAKANVAAGRGVWEFRLGEEQYAA-GDQITVDLFQAGQMV 107
Query: 428 DIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGN 249
D+ ++ +GF G +KRW F+G +HG + +HR PG+IG RV+ G KM GH+G
Sbjct: 108 DVTGESKGKGFAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGA 167
Query: 248 RWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 153
T++ ++I+R+D + N++ G A+PG TG
Sbjct: 168 ERVTVQSLEIVRVDAERNLLLVKG-AVPGATG 198
>UniRef50_Q67JU3 Cluster: 50S ribosomal protein L3; n=55;
Firmicutes|Rep: 50S ribosomal protein L3 -
Symbiobacterium thermophilum
Length = 216
Score = 102 bits (245), Expect = 9e-21
Identities = 63/204 (30%), Positives = 104/204 (50%)
Frame = -2
Query: 737 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 558
GKK+ T + D +I + E P + K Y + +G I ++V K
Sbjct: 7 GKKLGMTQIFAPDGKIIP-VTVVEAGPCVVVQKKTTATDGYNAVQLGFGEIRETLVNKPL 65
Query: 557 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 378
G F+ + R+L F + +L G + A F G+ +D+ + +GF G +KR
Sbjct: 66 KGHFEKHQVKATRYLREFRLDDVESLNVGDVIKADIFAEGELVDVTGISRGKGFAGGVKR 125
Query: 377 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 198
W F P+SHG +K HRRPG++G ARV G K+PG +G T+ G++++++D +
Sbjct: 126 WNFNRGPSSHG-SKYHRRPGSLGQ-RRWARVPKGRKLPGRLGGERVTVLGLRVVKVDPEK 183
Query: 197 NVIWTLGVAIPGETGAMCYLFDTV 126
N+I G A+PG G++ + D+V
Sbjct: 184 NLILIKG-AVPGAKGSLITIRDSV 206
>UniRef50_Q7WRC5 Cluster: 50S ribosomal protein L3; n=112;
Bacteria|Rep: 50S ribosomal protein L3 - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 233
Score = 102 bits (245), Expect = 9e-21
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R+GL+ RK+G ++ +DG+ + T+L V +N V + VK +E Y
Sbjct: 16 RLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRV--------------TQVKSLESDGYA 61
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALP---NGTPLYATHFRV 441
I V + V K G + G L F + P A + F
Sbjct: 62 AIQVTYGTRRATRVVKPQAGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEA 121
Query: 440 GDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPG 261
G +D+ ++ +GF G +KR F ASHG +++HR PG+IG + R++PG +M G
Sbjct: 122 GQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSG 181
Query: 260 HMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 153
HMG+ RT++ + ++R+D + ++ G A+PG G
Sbjct: 182 HMGDVTRTVQNLDVVRVDAERGLLMVKG-AVPGHAG 216
>UniRef50_O66431 Cluster: 50S ribosomal protein L3; n=9;
Bacteria|Rep: 50S ribosomal protein L3 - Aquifex
aeolicus
Length = 241
Score = 100 bits (240), Expect = 4e-20
Identities = 72/246 (29%), Positives = 111/246 (45%), Gaps = 1/246 (0%)
Frame = -2
Query: 788 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGC 609
+GLI K+G + KDG + T VIK+ P Y +KS K Y
Sbjct: 3 LGLIGEKVGMTRVLLKDGTAIPVT--------VIKF--PVNYVVQVKSQNT---KDGYNA 49
Query: 608 ILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATH-FRVGDC 432
+ +GA +TK G F G+ R L F V +G L F+ GD
Sbjct: 50 LQIGAYEAKEKHLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFQSGQQLKVEDVFKPGDL 109
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+D+ + RGF G MKRW F G P SHG + HR G IG + RVW G +MPGH G
Sbjct: 110 VDVWGISKGRGFAGAMKRWDFAGFPKSHG-HRYHRAVGAIGQRTDPGRVWKGKRMPGHYG 168
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPTQPFM 72
+ ++G+ ++ + + N I G ++PG + + + + ++++ Q +
Sbjct: 169 AKPVRVQGLFVVDVLPEENAILVKG-SVPGHNKGIVVVEQSTIAYRKSQKLKQKRYQFII 227
Query: 71 NDVPKE 54
++ KE
Sbjct: 228 ENLAKE 233
>UniRef50_Q8XHS3 Cluster: 50S ribosomal protein L3; n=7;
Bacteria|Rep: 50S ribosomal protein L3 - Clostridium
perfringens
Length = 209
Score = 100 bits (239), Expect = 5e-20
Identities = 61/192 (31%), Positives = 95/192 (49%)
Frame = -2
Query: 737 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 558
GKKV T + + VI + E P + K VE Y I VG + +V K
Sbjct: 7 GKKVGMTQIFDENGRVIP-VTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKLVNKPR 65
Query: 557 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 378
G F G+ +R L F + + G + F +GD +D+ + +GFQG +KR
Sbjct: 66 KGHFAKAGVSLRRTLKEFRMEDVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGFQGTIKR 125
Query: 377 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 198
W P SHG +K HR PG++G+ + +R + +MPGHMG + T+ +++++I +
Sbjct: 126 WNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVVKIMPEK 184
Query: 197 NVIWTLGVAIPG 162
N+I G IPG
Sbjct: 185 NIILIKG-GIPG 195
>UniRef50_Q3A9R6 Cluster: 50S ribosomal protein L3; n=3;
Bacteria|Rep: 50S ribosomal protein L3 -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 209
Score = 99 bits (238), Expect = 6e-20
Identities = 63/220 (28%), Positives = 111/220 (50%)
Frame = -2
Query: 785 GLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCI 606
G++ RK+G ++ +DG+ + T++ E P + K + Y I
Sbjct: 4 GILGRKVGMTQIFTEDGRAIPVTVI--------------EAGPCVVVQKKTIANDGYNAI 49
Query: 605 LVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCID 426
+G I S V K G F+ + P R+L V A G + F VG+ +D
Sbjct: 50 QLGFGEIKESKVNKPLKGHFNRANVKPMRYLREIRVENIDAYEVGQEIKVDIFTVGEKVD 109
Query: 425 IRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 246
+ + +GF G +KR GF P +HG +K HRRPG++G+ G ARV+ G K+PG +G
Sbjct: 110 VTGISKGKGFAGGIKRHGFHRGPMAHG-SKYHRRPGSLGAKG-PARVFLGRKLPGRLGME 167
Query: 245 WRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 126
T++ ++++++D + N++ G ++PG G++ + + V
Sbjct: 168 RVTIQNLEVVKVDPERNLLVIKG-SVPGIRGSLLIIKEAV 206
>UniRef50_P60447 Cluster: 50S ribosomal protein L3; n=85;
Gammaproteobacteria|Rep: 50S ribosomal protein L3 -
Shigella flexneri
Length = 209
Score = 98.7 bits (235), Expect = 1e-19
Identities = 61/213 (28%), Positives = 102/213 (47%)
Frame = -2
Query: 788 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGC 609
+GL+ +K+G ++ +DG + T+++V N V + VK + Y
Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRV--------------TQVKDLANDGYRA 47
Query: 608 ILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCI 429
I V + VTK G F G+ R L F ++ G + F +
Sbjct: 48 IQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFADVKKV 107
Query: 428 DIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGN 249
D+ + +GF G +KRW F+ A+HG + +HR PG+IG +V+ G KM G MGN
Sbjct: 108 DVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGN 167
Query: 248 RWRTLRGVKILRIDTKYNVIWTLGVAIPGETGA 150
T++ + ++R+D + N++ G A+PG TG+
Sbjct: 168 ERVTVQSLDVVRVDAERNLLLVKG-AVPGATGS 199
>UniRef50_A3EVS1 Cluster: 50S ribosomal protein L3; n=1;
Leptospirillum sp. Group II UBA|Rep: 50S ribosomal
protein L3 - Leptospirillum sp. Group II UBA
Length = 207
Score = 98.3 bits (234), Expect = 2e-19
Identities = 61/196 (31%), Positives = 98/196 (50%)
Frame = -2
Query: 737 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 558
G+K+ T + + + + E P VK EK+ Y +G + P + K
Sbjct: 6 GRKLGMTQIYLPSGQAVP-VTIVEAGPCEVLQVKTSEKEGYSAAQIGYFPVSPKHLNKPE 64
Query: 557 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 378
G R++ F V + P G L F+ GD +DI ++ +GF GVMKR
Sbjct: 65 RGHQQKYAKNLYRYVREFKVEENTQAP-GNILTVEIFQEGDSLDITGQSKGKGFAGVMKR 123
Query: 377 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 198
F+G A+HG + HR PG+IGS +RV K+PGHMG++ T++ +K++ + +
Sbjct: 124 HHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGDKRITVKNLKLIAVKPEA 182
Query: 197 NVIWTLGVAIPGETGA 150
N+++ G AIPG G+
Sbjct: 183 NLLFIKG-AIPGSNGS 197
>UniRef50_Q5P332 Cluster: 50S ribosomal protein L3; n=9;
Bacteria|Rep: 50S ribosomal protein L3 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 214
Score = 97.5 bits (232), Expect = 3e-19
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
Frame = -2
Query: 788 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGC 609
+GL+ RK+G ++ +DG+ V T+L V +N V + +K E Y
Sbjct: 3 LGLVGRKVGMTRIFAEDGRSVPVTVLDVSNNRV--------------TQIKTPESDGYAA 48
Query: 608 ILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPE--SALPNGTPLYATHFRVGD 435
+ V S V K G G+ L F V E + G + F VG
Sbjct: 49 VQVTFGKRRASRVGKPLAGHLAKAGVEAGHMLKEFRVETEQVAGFKAGDVVGVDLFAVGQ 108
Query: 434 CIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHM 255
+D+ ++ +GF GV KR F ASHG + +H PG+IG + RV+PG +M G
Sbjct: 109 KVDVTGTSIGKGFSGVGKRHNFSSNRASHGNSVSHNAPGSIGMAQDPGRVFPGKRMAGQY 168
Query: 254 GNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 153
GN T +G++++R+D + ++ G A+PG G
Sbjct: 169 GNTTCTTQGLEVVRVDVERQLLLVKG-AVPGSKG 201
>UniRef50_Q580R4 Cluster: Ribosomal protein L3 mitochondrial,
putative; n=6; Trypanosomatidae|Rep: Ribosomal protein
L3 mitochondrial, putative - Trypanosoma brucei
Length = 473
Score = 96.3 bits (229), Expect = 8e-19
Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Frame = -2
Query: 608 ILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCR-FVVSPESALPNGTPLYATHFRVGDC 432
+ VGA N+ P K + F +P +H+C F ++P++ P GT L HF+ G
Sbjct: 185 VYVGAMNV-PVEFHKPHVAAFYKAAGVPVKHVCAGFPITPDAYAPVGTKLDVRHFKPGQE 243
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+ I + D GF+GVM R GF G G ++ RRPG +G+ G+K R++PG +M G G
Sbjct: 244 VTITFQNTDYGFRGVMFRHGFDGGYVWLGDSRWQRRPGAMGTEGQK-RIYPGHRMAGQTG 302
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV----LPL-KRNKTAPPFP 87
T +GV + RID K ++I+ L + + G DT+ L L ++ P FP
Sbjct: 303 AAAETYQGVPVWRIDYKNSLIY-LPTLLDADVGTYVRFSDTINTKGLTLWNEHRGLPAFP 361
Query: 86 T 84
T
Sbjct: 362 T 362
>UniRef50_Q5GSU4 Cluster: 50S ribosomal protein L3; n=6;
Rickettsiales|Rep: 50S ribosomal protein L3 - Wolbachia
sp. subsp. Brugia malayi (strain TRS)
Length = 241
Score = 95.9 bits (228), Expect = 1e-18
Identities = 67/236 (28%), Positives = 117/236 (49%), Gaps = 1/236 (0%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R+GL+ IG+ ++ + +V+ TLL + + +++ +V+ +K Y
Sbjct: 9 RIGLLMTNIGHTAIY-SNNSRVAVTLLHLSETYIV--------------DVRRQDKCGYN 53
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
+++G N + K +G+ + L +S S + G + HF VG
Sbjct: 54 SVILGIGNFKN--IAKPQLEYLKKMGISNRCKLYESRLSDLSGIECGKKVGVNHFVVGQY 111
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+DI S ++ +GF GVMKR F G+ ASHGV+ HR G+ G + RV+ G +M GH+G
Sbjct: 112 LDITSYSIGKGFAGVMKRHNFCGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKRMAGHLG 171
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV-LPLKRNKTAPPFP 87
+ T++ ++IL ID + I G +PG + ++ D + PL ++ PFP
Sbjct: 172 SSRVTVQNMEILSIDHGNSTIVVKGNNVPGFKNSYVFVKDAIKKPLHKD---VPFP 224
>UniRef50_Q6MJ15 Cluster: 50S ribosomal protein L3; n=1;
Bdellovibrio bacteriovorus|Rep: 50S ribosomal protein L3
- Bdellovibrio bacteriovorus
Length = 220
Score = 95.9 bits (228), Expect = 1e-18
Identities = 62/180 (34%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Frame = -2
Query: 665 YKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPES 486
Y+P S +K E Y I V K G + G + +FV
Sbjct: 43 YEPWFVSQIKTNEADGYEAIQVACHPKKAKNSNKAEKGHLEKAGF---ENGAQFVKELRQ 99
Query: 485 ALPNGTPLYAT----HFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPG 318
A P GT + A GD + I SK+ +GF G +KRWGF G PASHG +K HRRPG
Sbjct: 100 AAPEGTVVGAQISIDSLAKGDFVKITSKSKGKGFAGSVKRWGFAGGPASHG-SKFHRRPG 158
Query: 317 NIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYL 138
+ G+ RV PG K PGH+G T++ V++++I + NV+ G +PG + L
Sbjct: 159 SSGNRTWPGRVMPGKKFPGHLGAETVTVKNVEVVQIIAEENVLMVKG-PVPGARNTLVKL 217
>UniRef50_A6PR85 Cluster: 50S ribosomal protein L3; n=2;
Chlamydiae/Verrucomicrobia group|Rep: 50S ribosomal
protein L3 - Victivallis vadensis ATCC BAA-548
Length = 218
Score = 95.5 bits (227), Expect = 1e-18
Identities = 73/204 (35%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Frame = -2
Query: 737 GKKVSTTLLQVVDNH-VIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKD 561
G+KV T QV D V+ + + P + ++VK VE+ Y + +G VTK
Sbjct: 6 GRKVGMT--QVYDEKGVLIPVTVVQAGPCVVTDVKTVERDGYSAVQLGFGERKAKNVTKA 63
Query: 560 YCGIFDSVGM----LPK--RHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRG 399
G G+ LP R + R E+ P GT L A F D +D+ T RG
Sbjct: 64 RAGHLAKAGVTGDKLPSVLREI-RTAAGDEAPAP-GTVLNADVFEANDYLDVVGTTKGRG 121
Query: 398 FQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKI 219
FQGV++R+ F G ASHG T RR G+IG V G +MPGHMGN RT++ +++
Sbjct: 122 FQGVVRRYRFGGGRASHGGVWT-RRTGSIGCCEWPGNVIKGKRMPGHMGNVPRTVQNLQV 180
Query: 218 LRIDTKYNVIWTLGVAIPGETGAM 147
+R+ + NV+ G AIPG G +
Sbjct: 181 VRVMAEDNVLLVKG-AIPGANGGI 203
>UniRef50_Q3ZZM4 Cluster: 50S ribosomal protein L3; n=10; cellular
organisms|Rep: 50S ribosomal protein L3 -
Dehalococcoides sp. (strain CBDB1)
Length = 205
Score = 94.7 bits (225), Expect = 2e-18
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 3/211 (1%)
Frame = -2
Query: 785 GLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCI 606
G+I +KIG ++ +DGK TL+ E P + VK ++ Y +
Sbjct: 4 GIIGKKIGMTQIFQEDGKAQPVTLV--------------EAGPCVVVQVKTEKQDGYEAV 49
Query: 605 LVG---AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGD 435
+G A++I +V K C F +L + V +A+ G + + F+ G+
Sbjct: 50 QLGYGKAKHITSAV--KGQCRGFGEFKVLREVD-----VDDIAAVSVGDQITVSDFKDGE 102
Query: 434 CIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHM 255
ID + RGF GV+KRW F G P +HG + HR PG+IGS R++ G M GHM
Sbjct: 103 KIDASGVSRGRGFSGVVKRWHFAGGPKTHGQSDRHRAPGSIGSTTTPGRIYKGKHMAGHM 162
Query: 254 GNRWRTLRGVKILRIDTKYNVIWTLGVAIPG 162
GN T+R + +L+ D + N++ G AIPG
Sbjct: 163 GNEAVTIRNLVVLKTDAEKNLLMVKG-AIPG 192
>UniRef50_Q97EH8 Cluster: 50S ribosomal protein L3; n=12;
Bacteria|Rep: 50S ribosomal protein L3 - Clostridium
acetobutylicum
Length = 209
Score = 94.7 bits (225), Expect = 2e-18
Identities = 60/204 (29%), Positives = 99/204 (48%)
Frame = -2
Query: 737 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 558
GKK+ T + + V+ + E P + K EK+ Y I VG I +V K
Sbjct: 7 GKKLGMTQIFNEEGKVVP-VTVIEAGPCVVIQKKTSEKEGYDAIQVGFGTIREKLVNKPL 65
Query: 557 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 378
G F + KR + F + S+ G + A F G+ +D+ + +GFQG ++R
Sbjct: 66 KGHFAKGNVELKRFVKEFRLEDTSSYEVGAEIKADIFAAGEKVDVSGVSKGKGFQGTIRR 125
Query: 377 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 198
WG P SHG +K HR G++G + +R + KMPGHMG+ T+ V++ ++ +
Sbjct: 126 WGAHRGPMSHG-SKFHRAVGSMGGSSDPSRTFKSKKMPGHMGHVNTTVLNVEVAKVIPEK 184
Query: 197 NVIWTLGVAIPGETGAMCYLFDTV 126
N+I G +PG + + ++V
Sbjct: 185 NLILIKG-GVPGPNKSFVVIKNSV 207
>UniRef50_A7APA8 Cluster: 50S ribosomal protein L3, putative; n=3;
Piroplasmida|Rep: 50S ribosomal protein L3, putative -
Babesia bovis
Length = 350
Score = 94.3 bits (224), Expect = 3e-18
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R G++A K+G LW G++ T+ V D V+ E + + + + V+
Sbjct: 91 RCGVLAYKLGCMSLWDDWGERHMVTVCHV-DRCVVL-----EKRTIAEHGYEAVQ----- 139
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
+ +G NI+ +K G F G+ K H+ F S + LP G + HF G
Sbjct: 140 -LGLGYRNINRQ--SKQNIGRFIKAGVGSKDHIAEFKCSSDCLLPVGHYMSVRHFTPGQW 196
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGV-TKTHRRPGNIGSGGEKARVWPGTKMPGHM 255
+ + + +GFQG M+RW F G ASHG K H PG+I G VW GTKM GH
Sbjct: 197 VFVSGWSQPKGFQGAMRRWHFGGQNASHGTECKAHSAPGSIAQGKSAHIVWRGTKMGGHK 256
Query: 254 GNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV-LPLKRNK 105
G R + ++ RI+ N+I+ G +PG+ ++ + D + + +++N+
Sbjct: 257 GPDPR-VTNCRVFRIEAHRNLIFLKG-TVPGDVMSVLKIRDALGICVRKNR 305
>UniRef50_Q890N9 Cluster: 50S ribosomal protein L3; n=32;
Bacteria|Rep: 50S ribosomal protein L3 - Clostridium
tetani
Length = 209
Score = 91.9 bits (218), Expect = 2e-17
Identities = 60/192 (31%), Positives = 92/192 (47%)
Frame = -2
Query: 737 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 558
G+K+ T + +N V+ + E P K VEK Y I VG I +V K
Sbjct: 7 GRKLGMTQIFDENNRVVP-VTVVEAGPCTVVQKKSVEKDGYEAIQVGYGEIREKLVNKPL 65
Query: 557 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 378
G F+ G+ R L F + S G + F G+ ID+ + +G+QG++KR
Sbjct: 66 KGHFEKAGVGLSRMLREFKLENVSEYQVGQEIKVDIFEAGEKIDVTGTSKGKGYQGIIKR 125
Query: 377 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 198
W P SHG +K HR G++G+ AR + +M GHMGN T+ +++++ +
Sbjct: 126 WNAHRGPMSHG-SKFHRAVGSMGAASYPARTFKNKRMAGHMGNVKSTVLNLEVVKTIPEK 184
Query: 197 NVIWTLGVAIPG 162
N+I G IPG
Sbjct: 185 NLILIKG-GIPG 195
>UniRef50_P94267 Cluster: 50S ribosomal protein L3; n=4; Borrelia
burgdorferi group|Rep: 50S ribosomal protein L3 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 206
Score = 91.9 bits (218), Expect = 2e-17
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Frame = -2
Query: 788 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGC 609
+GLI +K+G ++ K+G V T+++ N++I K V++ Y
Sbjct: 2 LGLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYII--------------GKKTVDRDGYSA 47
Query: 608 ILVGAENIDPSVVTKDYCGIFDSVGML-PKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
++ G+ ++ S V+K G + S+ + PKR++ + G + F+
Sbjct: 48 LIAGSVDLKSSKVSKPIKGQYKSLKDIEPKRYVIE--LKGLDGYDAGDEIKVDVFKSVKY 105
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+D+ T +GFQG MKR F G P+SHG +K HR G G AR + GTKM G M
Sbjct: 106 VDVTGTTKGKGFQGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMA 164
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGA 150
+T++ ++++ ID + + G A+PG G+
Sbjct: 165 GNQQTIQNLEVVLIDEEKRALLVKG-AVPGAKGS 197
>UniRef50_Q85FW3 Cluster: Chloroplast 50S ribosomal protein L3; n=2;
Cyanidioschyzon merolae|Rep: Chloroplast 50S ribosomal
protein L3 - Cyanidioschyzon merolae (Red alga)
Length = 182
Score = 89.0 bits (211), Expect(2) = 2e-17
Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Frame = -2
Query: 506 FVVSPESALPNGTPL-YATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTH 330
F V SA P G L +T F++G + +++KT+ +GF G KR F P SHG +K H
Sbjct: 62 FRVKHLSAYPIGRRLDLSTCFQIGQKVSVKAKTIGKGFAGYQKRHHFARGPMSHG-SKNH 120
Query: 329 RRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 153
R+PG+IG+G RV+PGT+M G +G + T++G++IL+I N L A+PG+ G
Sbjct: 121 RQPGSIGAGTFPGRVFPGTRMAGRLGGNFCTIKGLEILQIQ---NDQMALKGAVPGKVG 176
Score = 23.0 bits (47), Expect(2) = 2e-17
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -2
Query: 788 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEE--YKPMIKSNVKWVEK 624
+ L+A KIG L+ + G + T ++ + VI + PE+ Y ++ W+ +
Sbjct: 5 MSLLATKIGMSQLFDEKGNALPVTWVKSGVHEVIDHRTPEKHGYTALVVRYQHWIRE 61
>UniRef50_Q7V9W2 Cluster: 50S ribosomal protein L3; n=35; cellular
organisms|Rep: 50S ribosomal protein L3 -
Prochlorococcus marinus
Length = 219
Score = 91.1 bits (216), Expect = 3e-17
Identities = 55/214 (25%), Positives = 99/214 (46%)
Frame = -2
Query: 788 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGC 609
+G++ +K+G + + G+ + TL+ E P + +K Y
Sbjct: 3 IGILGKKLGMSQFFDEKGRSIPVTLV--------------EAGPCRITQLKSSATDGYSA 48
Query: 608 ILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCI 429
+ + + ++ K + G G R++ + V G + F G +
Sbjct: 49 VQIAFGAVREKLINKPFQGHLAKSGDDLLRYMSEYRVKDVGEFQLGAQITVGDFEEGQKV 108
Query: 428 DIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGN 249
D+ +M RGF G KR GF P SHG +K HR PG+ G+G R++PG +M G G
Sbjct: 109 DVSGTSMGRGFSGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGG 167
Query: 248 RWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAM 147
+ T RG+ I+++D+ N++ G ++PG+ G++
Sbjct: 168 KKITTRGLMIMKVDSDKNLLVIKG-SLPGKPGSL 200
>UniRef50_Q7XYP4 Cluster: 50S ribosomal protein L3, chloroplast
precursor; n=3; cellular organisms|Rep: 50S ribosomal
protein L3, chloroplast precursor - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 302
Score = 91.1 bits (216), Expect = 3e-17
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = -2
Query: 521 RHLCRFVVSPESALPNGTPLYATH-FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHG 345
+HL F ++ S G L A F VGD +D+ + +GFQG ++RWG K P SHG
Sbjct: 166 KHLKEFKIADVSEFTPGQQLKAEELFEVGDLVDVSGTSSGKGFQGSIRRWGMKRGPMSHG 225
Query: 344 VTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIP 165
+K+HR+ G+IG +RV+ G KM G MGN +T++ + ++ ++ + I G ++P
Sbjct: 226 -SKSHRQHGSIGCSATPSRVYKGLKMAGRMGNERKTVKKLPVMMVNDEEKYIVVRG-SVP 283
Query: 164 GETGAMCYLFDT 129
G+ G + L T
Sbjct: 284 GKKGTIVELRPT 295
>UniRef50_A6CGN0 Cluster: 50S ribosomal protein L3; n=2;
Bacteria|Rep: 50S ribosomal protein L3 - Planctomyces
maris DSM 8797
Length = 229
Score = 90.6 bits (215), Expect = 4e-17
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 6/218 (2%)
Frame = -2
Query: 788 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHV--IKYIPPEEYKPM---IKSNVKWVEK 624
VGL+ +K+G ++ DG V T++Q HV ++ + + Y+ + + + +
Sbjct: 3 VGLLGKKVGMTQIY-DDGVMVPVTVIQAGPCHVLQVRTLDTDGYEAVQVGFEDKPRRLAA 61
Query: 623 QKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPES-ALPNGTPLYATHF 447
+ + ++ + + D G PKR + F E G L + F
Sbjct: 62 RSERGHVAALDSKRQKKRAESGVAVVDKAGCEPKRFVKEFRTDGEDHGCEVGGELTVSVF 121
Query: 446 RVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKM 267
ID+ + RGF GVMKR F G A+HGV + HR G+IG + +RV GT+M
Sbjct: 122 ADVPFIDVIGTSKGRGFAGVMKRHNFSGQRATHGVKRVHRHGGSIGMSADPSRVLKGTRM 181
Query: 266 PGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 153
G G + T+R +K++R+D + V+ G A+PG G
Sbjct: 182 GGRYGGKQITVRHLKVVRVDEENGVLLVRG-AVPGPNG 218
>UniRef50_Q7VQE8 Cluster: 50S ribosomal protein L3; n=38;
Bacteria|Rep: 50S ribosomal protein L3 - Blochmannia
floridanus
Length = 219
Score = 90.6 bits (215), Expect = 4e-17
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 3/214 (1%)
Frame = -2
Query: 785 GLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCI 606
GL+ RK+G + ++G ++ T+++++ ++V + VK EK Y +
Sbjct: 3 GLVGRKLGMTRIINEEGIMIAVTMIEILPHYV--------------TQVKNKEKDGYCAV 48
Query: 605 LVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCI- 429
V N + K G +G+ + L F ++ + L + ++ +V CI
Sbjct: 49 QVTTGNTRDKCLNKPKLGHLKKLGINYGKGLWEFRLNDSNRLISVGDIFT--LKVLKCIN 106
Query: 428 --DIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHM 255
D+ + +GF G +KRW F+ ASHG + +HR PG+IG +V+ G KM GH+
Sbjct: 107 KVDVTGISKGKGFAGAVKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHL 166
Query: 254 GNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 153
G T++ + ++ ID K N++ G AIPG G
Sbjct: 167 GYEKATIQNLAVINIDIKNNLLLVKG-AIPGVIG 199
>UniRef50_Q8EUB3 Cluster: 50S ribosomal protein L3; n=6;
Firmicutes|Rep: 50S ribosomal protein L3 - Mycoplasma
penetrans
Length = 310
Score = 89.4 bits (212), Expect = 9e-17
Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 3/227 (1%)
Frame = -2
Query: 782 LIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCIL 603
++ RKIG + +DG+++ T++Q N V++ K EK Y
Sbjct: 4 ILGRKIGMIQSFLEDGRRIPVTIIQAEPNVVLEN--------------KTQEKNGYVATK 49
Query: 602 VGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDI 423
VG + I+ + K G F + +H F S G + F GD +D
Sbjct: 50 VGFQQIEEKKLNKPQKGYFKKIKTDAFKHTKEF--RNVSGYNVGDKILVDIFNSGDKVDA 107
Query: 422 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI--GSGGEKA-RVWPGTKMPGHMG 252
++ T +GF G +KRW FK P HG HR G+I G GG + RV G KM GH G
Sbjct: 108 QAITKGKGFTGAIKRWNFKVGPLGHGAGYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYG 167
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKR 111
+ T+ + ++ I+ + N+I G ++PG ++ L TV K+
Sbjct: 168 HELVTISNLTVVSIELEKNLILVKG-SVPGPVNSLVLLKTTVKSKKQ 213
>UniRef50_Q6Q8Y8 Cluster: 50S ribosomal protein L3; n=1; uncultured
marine gamma proteobacterium EBAC20E09|Rep: 50S
ribosomal protein L3 - uncultured marine gamma
proteobacterium EBAC20E09
Length = 202
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/108 (39%), Positives = 63/108 (58%)
Frame = -2
Query: 473 GTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEK 294
G + A F VG +DI + +G+ GV+KR F A+HG + HR G+IG
Sbjct: 82 GKHMTADVFEVGQFVDITGTSKGKGYAGVIKRHNFSMQDATHGNSLAHRAHGSIGQCQTP 141
Query: 293 ARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGA 150
RVW G KM GHMGN +T++ +KI+ +D + NV++ G A+PG G+
Sbjct: 142 GRVWKGKKMSGHMGNVQKTVQNLKIVELDVENNVVYVKG-AVPGFNGS 188
>UniRef50_A6G3Z5 Cluster: 50S ribosomal protein L3; n=1;
Plesiocystis pacifica SIR-1|Rep: 50S ribosomal protein
L3 - Plesiocystis pacifica SIR-1
Length = 223
Score = 88.2 bits (209), Expect = 2e-16
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 2/212 (0%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
++GL+ +KIG + +DG +V T+L N V + + VE+ Y
Sbjct: 4 QMGLLTKKIGMTEFYKEDGTRVPVTVLLAKGNVVTAH--------------RTVERDGYT 49
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPN--GTPLYATHFRVG 438
+ + ++ S ++K G F + PKR + F V+ + + G+ + + F G
Sbjct: 50 ALQLAFDDQKASRLSKPKLGQFKKAEVSPKRKIKEFRVAADVVAQHAVGSEVDVSIFSDG 109
Query: 437 DCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGH 258
+D+ + +GFQGVMKR G +G +HG + +R G+IG RV PG +M G
Sbjct: 110 QLVDVTGTSKGKGFQGVMKRHGMRGEKRTHGQHEVYRHGGSIGCRLTPGRVIPGKRMAGQ 169
Query: 257 MGNRWRTLRGVKILRIDTKYNVIWTLGVAIPG 162
MGN T++ +++ ++ +I G AIPG
Sbjct: 170 MGNETVTVQNLEVAKVIADKGLILVKG-AIPG 200
>UniRef50_Q1NYY1 Cluster: 50S ribosomal protein L3; n=4;
Bacteria|Rep: 50S ribosomal protein L3 - Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)
Length = 206
Score = 87.4 bits (207), Expect = 4e-16
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Frame = -2
Query: 668 EYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPE 489
E P I +K EK Y +G + K F PK+ + F + +
Sbjct: 28 EAGPCIVLQIKTKEKDGYDSCQLGFDEKKYKNTNKPLLFFFKKFKSTPKKKI--FELPIK 85
Query: 488 SALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGM-PASHGVTKTHRRPGNI 312
+ +G + F + ++I + +GFQGV+KR GF G+ SHG R PG+I
Sbjct: 86 GNIKSGNIIKLNCFHENELVNITGFSKGKGFQGVVKRHGFSGVGERSHGQHNRSRAPGSI 145
Query: 311 GSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPG 162
G+G + +RV+ GT+M G MGN+ TL+ KIL+ID N + G ++PG
Sbjct: 146 GAGSDPSRVFKGTRMAGRMGNKKVTLKNRKILKIDLLNNFLIIKG-SVPG 194
>UniRef50_Q9Z7Q7 Cluster: 50S ribosomal protein L3; n=9;
Chlamydiaceae|Rep: 50S ribosomal protein L3 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 219
Score = 85.8 bits (203), Expect = 1e-15
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 10/224 (4%)
Frame = -2
Query: 788 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGC 609
+ ++ +K G ++ KDG V+ ++++V +P + + +K E Y
Sbjct: 5 ISVMGKKEGMIHIFDKDGSLVACSVIRV--------------EPNVVTQIKTKESDGYFS 50
Query: 608 ILVGAENIDPSV------VTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATH- 450
+ +GAE ++ V+K G G R L + V E AL NG L
Sbjct: 51 LQIGAEEMNAPAHTITKRVSKPKLGHLRKAGGRVFRFL-KEVRGSEEAL-NGVSLGDAFG 108
Query: 449 ---FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWP 279
F +D+R + +GFQGVMK++GF+G P SHG + HR G+IG R +P
Sbjct: 109 LEVFEDVSSVDVRGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFP 167
Query: 278 GTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAM 147
G+K P HMG T++ ++++++D + V+ G AIPG G++
Sbjct: 168 GSKRPSHMGAENVTVKNLEVIKVDLEKKVLLVKG-AIPGARGSI 210
>UniRef50_O83219 Cluster: 50S ribosomal protein L3; n=2;
Treponema|Rep: 50S ribosomal protein L3 - Treponema
pallidum
Length = 208
Score = 84.6 bits (200), Expect = 3e-15
Identities = 64/217 (29%), Positives = 100/217 (46%)
Frame = -2
Query: 788 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGC 609
VGLI +K+G ++ G T+++V N V+ +K VE+ Y
Sbjct: 2 VGLIGQKVGMTQIFDARGCVTPVTVIRVEHNVVV--------------GLKDVERFGYSA 47
Query: 608 ILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCI 429
+++G + S ++K Y G F +P + R + G L +
Sbjct: 48 VILGTGCMKKSRISKPYAGQFAE--RIPPVRVMREFRGFTLDVSVGQVLDVRVLESVRYL 105
Query: 428 DIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGN 249
D+ + + +GFQGV+KRWGF G +SHG +K HR G+ G R + KMPG MG
Sbjct: 106 DVCALSKGKGFQGVVKRWGFSGGRSSHG-SKFHREAGSTGQCTSPGRTFKNVKMPGRMGA 164
Query: 248 RWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYL 138
T++ ++I RID V+ G A+PG A +L
Sbjct: 165 ERVTVQNLRIERIDVGLGVVMVRG-AVPGRNKATVFL 200
>UniRef50_P75580 Cluster: 50S ribosomal protein L3; n=4;
Mycoplasma|Rep: 50S ribosomal protein L3 - Mycoplasma
pneumoniae
Length = 287
Score = 84.6 bits (200), Expect = 3e-15
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Frame = -2
Query: 662 KPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESA 483
+P + VK K KY L+ + ++ + K G F+ + P +HL + +
Sbjct: 32 EPNQVAGVKTEAKDKYSATLLSFDTVENKKLNKPQQGFFEKNNLKPTKHLQE--IRNMTG 89
Query: 482 LPNGTPLYATH-FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI-- 312
G + + F+VG+ +D+ + + RGF G +KRW FK P HG HR G++
Sbjct: 90 FEMGQQITPQNLFQVGEYVDVSAISKGRGFTGAIKRWNFKIGPLGHGAGYPHRFQGSVQA 149
Query: 311 GSGGEKA-RVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAM 147
G GG A RV+ G KM GH G+ T++ ++I+ D + N++ + AI G G +
Sbjct: 150 GRGGASAQRVFKGKKMSGHYGHEKVTVQNLRIVGFD-EANMLVLVSGAIAGPEGGV 204
>UniRef50_Q81VT0 Cluster: 50S ribosomal protein L3; n=9;
Bacteria|Rep: 50S ribosomal protein L3 - Bacillus
anthracis
Length = 210
Score = 83.4 bits (197), Expect = 6e-15
Identities = 58/208 (27%), Positives = 99/208 (47%)
Frame = -2
Query: 785 GLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCI 606
G++ RKIG ++ ++G+ + T++ N V++ K E Y I
Sbjct: 4 GILGRKIGMTQVFAENGELIPVTVIAANPNVVLQK--------------KTTETDGYNAI 49
Query: 605 LVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCID 426
+G E+ + K G PKR + + L G + F G+ +D
Sbjct: 50 QLGFEDKREKLTNKPEQGHTAKASTTPKRFIREIRDADVDGLEVGQEVKVDVFATGEIVD 109
Query: 425 IRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 246
+ + +GFQGV+KR G P SHG ++ HRRPG++G RV+ G K+ G MG
Sbjct: 110 VTGISKGKGFQGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVAPN-RVFKGKKLAGRMGGD 167
Query: 245 WRTLRGVKILRIDTKYNVIWTLGVAIPG 162
T++ ++I+++DT+ N++ G +PG
Sbjct: 168 QVTIQNLEIVQVDTERNLLLVKG-NVPG 194
>UniRef50_Q8Y440 Cluster: 50S ribosomal protein L3; n=19;
Bacteria|Rep: 50S ribosomal protein L3 - Listeria
monocytogenes
Length = 209
Score = 81.8 bits (193), Expect = 2e-14
Identities = 58/213 (27%), Positives = 99/213 (46%)
Frame = -2
Query: 785 GLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCI 606
G++ RK+G ++ ++G+ + T+++ N V++ K VE Y +
Sbjct: 4 GILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQK--------------KTVETDGYEAV 49
Query: 605 LVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCID 426
+G E+ + K G PKR + F G + F GD ID
Sbjct: 50 QIGFEDKRAILSNKPEQGHVAKANTTPKRFIREFRDVNLDEYEIGAEVKVDVFAEGDIID 109
Query: 425 IRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 246
+ +GFQGV+KR G P +HG ++ HRRPG++G RV+ +PG MG
Sbjct: 110 ATGVSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVAPN-RVFKNKLLPGRMGGE 167
Query: 245 WRTLRGVKILRIDTKYNVIWTLGVAIPGETGAM 147
T++ ++I+++D + NV+ G +PG A+
Sbjct: 168 QITIQNLEIVKVDVEKNVLLVKG-NVPGAKKAL 199
>UniRef50_Q7UN20 Cluster: 50S ribosomal protein L3; n=2;
Planctomycetaceae|Rep: 50S ribosomal protein L3 -
Rhodopirellula baltica
Length = 228
Score = 81.4 bits (192), Expect = 2e-14
Identities = 46/133 (34%), Positives = 66/133 (49%)
Frame = -2
Query: 527 PKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASH 348
P+R + F S E+ + G L F +DI + RGF GVMKR F G A+H
Sbjct: 95 PQRFVREFRGSSEANV--GDTLTVEQFNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATH 152
Query: 347 GVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAI 168
GV K HR G G +R + G +M G GN T R ++++R+D + N++ G A+
Sbjct: 153 GVKKCHRHAGGTGMSASPSRTFKGKRMAGQYGNAKVTTRNLEVVRVDAENNLLMIRG-AV 211
Query: 167 PGETGAMCYLFDT 129
PG G + T
Sbjct: 212 PGPNGGFVSIRQT 224
>UniRef50_A6GV22 Cluster: 50S ribosomal protein L3; n=2; cellular
organisms|Rep: 50S ribosomal protein L3 - Limnobacter
sp. MED105
Length = 126
Score = 80.2 bits (189), Expect = 5e-14
Identities = 38/107 (35%), Positives = 60/107 (56%)
Frame = -2
Query: 473 GTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEK 294
G + A F G +D+ T +GF G +KR F ASHG + +H PG+IG +
Sbjct: 8 GAAVSAEIFAPGQKVDVSGVTQGKGFSGAIKRHHFSSQRASHGNSISHNAPGSIGMAQDP 67
Query: 293 ARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 153
RV+PG +M G +GN RT + ++++R+D + ++ G A+PG G
Sbjct: 68 GRVFPGKRMAGQLGNVNRTTQNLEVVRVDAERGLLLIKG-AVPGSKG 113
>UniRef50_A5K6P7 Cluster: 50S ribosomal protein L3, putative; n=5;
Plasmodium|Rep: 50S ribosomal protein L3, putative -
Plasmodium vivax
Length = 316
Score = 79.8 bits (188), Expect = 7e-14
Identities = 57/210 (27%), Positives = 101/210 (48%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R+ + +KI ++ +GK + TL++++ N + +++ + K G
Sbjct: 93 RIQIRGKKIEMRSIFSPNGKLIPATLIEIMPNVIYRFL----------------DFGKVG 136
Query: 611 CILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDC 432
I G + + K G VG K + C ++P G + ++
Sbjct: 137 -IAYGKPLEESRWILKPEIGQIAKVGCNYK-NTCSLTLTPPQNFVLGQIIDVSYLYNYKY 194
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+++R + +GF GV+KRWGF+ P +HG + HR+PG+IG+ RV G KMPG G
Sbjct: 195 VNVRGLSKGKGFCGVIKRWGFRRGPMTHG-SSHHRKPGSIGASTHIGRVLKGKKMPGKHG 253
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPG 162
N++ T+ +K+L ++ + N I G IPG
Sbjct: 254 NKYNTMINLKLLGLNLERNEILVSG-CIPG 282
>UniRef50_Q5FM90 Cluster: 50S ribosomal protein L3; n=31;
Bacteria|Rep: 50S ribosomal protein L3 - Lactobacillus
acidophilus
Length = 212
Score = 78.6 bits (185), Expect = 2e-13
Identities = 60/227 (26%), Positives = 104/227 (45%)
Frame = -2
Query: 785 GLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCI 606
G++ RK+G ++ KDG V T+++ N V++ VK VE Y +
Sbjct: 4 GILGRKVGMTQIFTKDGILVPVTVVEATPNVVMQ--------------VKTVESDGYEAV 49
Query: 605 LVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCID 426
+G ++ + K G D PKR + G+ + F+ GD ++
Sbjct: 50 QLGYQDKREVLSNKPEKGHADKAKTSPKRFIREIRGVELKDYEVGSEVTVDTFKEGDVVN 109
Query: 425 IRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 246
+ + G+QG +KRWG P +HG ++ HR PG++GS RV G ++PGHMG +
Sbjct: 110 VTGTSRGHGYQGNIKRWGQSRGPETHG-SRYHRIPGSMGS--IINRVPKGKRLPGHMGVK 166
Query: 245 WRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNK 105
T+ + I ++ NV+ G +PG ++ + +K +K
Sbjct: 167 KVTIENLVIEKVVADKNVLMIKG-NVPGAKNSLIVVKTASKAVKADK 212
>UniRef50_Q2IJD0 Cluster: 50S ribosomal protein L3; n=2;
Anaeromyxobacter|Rep: 50S ribosomal protein L3 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 236
Score = 78.6 bits (185), Expect = 2e-13
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 8/224 (3%)
Frame = -2
Query: 785 GLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCI 606
GL+A+K+G ++ +G V T+L+ V++ K EK Y +
Sbjct: 4 GLLAKKVGMTQIFTPEGDCVPVTVLEAGPCTVVRR--------------KTAEKDGYDAV 49
Query: 605 LVGAENIDPSV---VTKDYCGIFDSVGMLPKRHLCRFVVSPESALPN---GTPLYATH-F 447
++G +D ++K G+F G RH+ V L + G L F
Sbjct: 50 VIGFGVVDEKHAHRLSKPEVGVFKKAGTPIFRHVKEIRVKDAKLLGDLKAGDVLTVDKVF 109
Query: 446 RVGDCIDIRSKTMDRGFQGVMKRWGFKGMPA-SHGVTKTHRRPGNIGSGGEKARVWPGTK 270
+ ID+ T RGF GVMKRW KG S + HR G IG +VW G
Sbjct: 110 KANQRIDVAGVTKGRGFTGVMKRWNMKGAARDSSTAHEHHRHVGAIGQRKTPGKVWKGKH 169
Query: 269 MPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYL 138
+PGH G T++ + ++ I+ + NV+ G A+PG + ++
Sbjct: 170 LPGHYGVDNITIQNLTVVGIEPEQNVLLVSG-AVPGHADGLLFV 212
>UniRef50_Q8KTP2 Cluster: 50S ribosomal protein L3; n=1; Candidatus
Tremblaya princeps|Rep: 50S ribosomal protein L3 -
Tremblaya princeps
Length = 205
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/109 (35%), Positives = 59/109 (54%)
Frame = -2
Query: 473 GTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEK 294
G P R G + I+++++ +GF GVMKR GF ASHG +K HR G+ G +
Sbjct: 95 GRPHAKAILRAGQLVSIKARSVGKGFSGVMKRHGFSSGRASHGTSKAHRTLGSTGMSQDP 154
Query: 293 ARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAM 147
RV+PG +MPG MG T R + + + ++ + G IPG G++
Sbjct: 155 GRVFPGKRMPGRMGCEHATARNLMVEHV--AHDFVMVRG-GIPGHAGSI 200
>UniRef50_Q4UBR8 Cluster: 50S ribosomal protein L3, putative; n=2;
Theileria|Rep: 50S ribosomal protein L3, putative -
Theileria annulata
Length = 328
Score = 77.8 bits (183), Expect = 3e-13
Identities = 42/98 (42%), Positives = 59/98 (60%)
Frame = -2
Query: 413 TMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTL 234
T +GFQGV+KR GFK P SHG +K HRRPG+IG+ V PG KMPG MG + T
Sbjct: 226 TKGKGFQGVIKRHGFKRGPMSHG-SKHHRRPGSIGASTTPGCVKPGKKMPGRMGGKRCTF 284
Query: 233 RGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLP 120
R +KIL ++ + ++++ G + G G+ + V P
Sbjct: 285 RKLKILGLNPETSLLYVKG-HVAGPKGSYVTVTSDVQP 321
>UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11;
Bacteria|Rep: 50S ribosomal protein L3 - Mycoplasma
mobile
Length = 297
Score = 73.3 bits (172), Expect = 6e-12
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
Frame = -2
Query: 785 GLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCI 606
G++ +KIG ++ G KV T+++V KP + ++ K Y +
Sbjct: 3 GILGQKIGMTQIYTAQGNKVPVTVIEV--------------KPNVVTHKFENTKDGYVAL 48
Query: 605 LVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCID 426
+GA + K G F PKR + + G + A F+ G+ +D
Sbjct: 49 QLGAFDQKERKFKKPEIGHFKKSNTTPKRFVKE--IRNMDGYNLGDLVKADIFKSGELVD 106
Query: 425 IRSKTMDRGFQGVMKRWGFKGMPASHGV---TKTHRRPGNIGS-GGEKARVWPGTKMPGH 258
+ + +GF G +KR K P SHG +K R+ G+IG G K V G MPGH
Sbjct: 107 VTGISKGKGFAGTIKRHNQKIGPKSHGGGGGSKPVRQTGSIGDIAGNK--VLKGMTMPGH 164
Query: 257 MGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYL 138
+GN RT++ ++++++D K N++ G ++PG C+L
Sbjct: 165 LGNVQRTIQNLEVVKVDIKNNILLVKG-SVPGPKN--CFL 201
>UniRef50_Q1ISC2 Cluster: 50S ribosomal protein L3; n=5;
Bacteria|Rep: 50S ribosomal protein L3 - Acidobacteria
bacterium (strain Ellin345)
Length = 244
Score = 72.1 bits (169), Expect = 1e-11
Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 10/210 (4%)
Frame = -2
Query: 737 GKKVSTTLLQVVDNHV-IKYIPPEEYKPMIKSNVKWVEKQKYGCILVG-AENIDPSVVTK 564
GKK+ T Q+ D+ ++ + + P + + K K Y VG E + + +TK
Sbjct: 7 GKKIGMT--QLFDSKGDVRPVTVLQAGPCVITQRKTANKDGYDAAQVGLVEFVKETRLTK 64
Query: 563 DYCGIFDSVGMLPKRHLCRFVV---SPESALPNGT-----PLYATHFRVGDCIDIRSKTM 408
G + P R L F + P A NG + F +D+ +
Sbjct: 65 AQLGHLGKNDLPPVRTLHEFAIVADGPSEAESNGEVKVGDKVLVDLFEGSKFVDVTGVSK 124
Query: 407 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRG 228
RGF GV+KR F G SHG + G+IGS +RV+ G +M GHMG T+R
Sbjct: 125 GRGFAGVVKRHKFAGGARSHG--SMFQISGSIGSSAFPSRVFKGMRMAGHMGQDQVTVRN 182
Query: 227 VKILRIDTKYNVIWTLGVAIPGETGAMCYL 138
++IL ID N++ G A+PG A ++
Sbjct: 183 LRILGIDKDENLLVVEG-AVPGPKDATVFI 211
>UniRef50_Q9TLT2 Cluster: Chloroplast 50S ribosomal protein L3; n=1;
Cyanidium caldarium|Rep: Chloroplast 50S ribosomal
protein L3 - Cyanidium caldarium
Length = 215
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/93 (36%), Positives = 58/93 (62%)
Frame = -2
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+ + + T+ +GF G K+ F SHG +K+HRRPG+IG+G RV+PG KM G +G
Sbjct: 110 VQVSAYTIGKGFAGYQKKHKFSRGAMSHG-SKSHRRPGSIGAGTTPGRVFPGVKMAGRLG 168
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 153
R+++ + +L++D N ++ L ++PG+ G
Sbjct: 169 FSRRSIKNLLVLKVDLT-NKLFLLKGSVPGKYG 200
>UniRef50_A7AWX6 Cluster: Ribosomal protein L3 domain containing
protein; n=1; Babesia bovis|Rep: Ribosomal protein L3
domain containing protein - Babesia bovis
Length = 323
Score = 70.1 bits (164), Expect = 6e-11
Identities = 35/94 (37%), Positives = 57/94 (60%)
Frame = -2
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+ + T +GF GV+KR GF P SHG +K HR+PG+IG+ V PG +MPG MG
Sbjct: 214 VKVTGITKGKGFAGVIKRHGFARGPMSHG-SKHHRKPGSIGASTTPGCVKPGKRMPGRMG 272
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGA 150
N+ T R +++L I+ + ++++ + + G G+
Sbjct: 273 NKRCTFRKLRVLGINPETSLMYVKAL-VAGANGS 305
>UniRef50_Q7M8D4 Cluster: 50S ribosomal protein L3; n=23;
Epsilonproteobacteria|Rep: 50S ribosomal protein L3 -
Wolinella succinogenes
Length = 192
Score = 69.7 bits (163), Expect = 8e-11
Identities = 41/94 (43%), Positives = 54/94 (57%)
Frame = -2
Query: 431 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
+ + +T RGF GVMKRW F G PA+HG + RR G+IG+ RV PG KM G G
Sbjct: 94 VKVSLQTKGRGFTGVMKRWNFAGGPAAHG-HRFKRRTGSIGNREWPGRVQPGKKMAGQYG 152
Query: 251 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGA 150
N T++ +I+ D + N I L +IPG GA
Sbjct: 153 NEKVTVQN-EIVSFDAE-NKILVLKGSIPGFNGA 184
>UniRef50_Q8I4X7 Cluster: 50S ribosomal protein L3, putative; n=7;
Plasmodium|Rep: 50S ribosomal protein L3, putative -
Plasmodium falciparum (isolate 3D7)
Length = 341
Score = 66.1 bits (154), Expect = 1e-09
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Frame = -2
Query: 791 RVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYG 612
R GL+ K+G +W G K + T++++ + +VI N K + K Y
Sbjct: 80 RSGLLGYKVGCMSIWDVWGVKHAVTVVKIDNCYVI--------------NQKTISKNGYE 125
Query: 611 CILVGAENIDPSVVTKDYCGIF--DSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVG 438
+ +G N++ +K+ G F +G + K + F + + LP HF G
Sbjct: 126 ALELGVGNMNVIKQSKNNIGNFIKRKLGFIHK--IKEFKCTSDCFLPIHHKFSCRHFSPG 183
Query: 437 DCIDIRSKTMDRGFQGVMKRWGFKGMPASHGV-TKTHRRPGNIGSGGEKARVWPGTKMPG 261
+ I S ++GF G MK+W F G SHG +K HR G++ G V+ KM
Sbjct: 184 QNLFISSGIKNKGFCGAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNT 243
Query: 260 HMGNRWRT-LRGVKILRIDTKYNVIWTLG 177
H+G + K+ RI++ N+++ G
Sbjct: 244 HIGEKSLVKCSNNKLFRINSLKNLLFIKG 272
>UniRef50_A5KRQ1 Cluster: 50S ribosomal protein L3; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L3 - candidate division TM7 genomosp. GTL1
Length = 180
Score = 60.9 bits (141), Expect = 4e-08
Identities = 44/166 (26%), Positives = 77/166 (46%)
Frame = -2
Query: 659 PMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESAL 480
P + VK +K Y + +G + ++ G + + PK + V+ +
Sbjct: 8 PCAVTQVKTADKDGYNAVQIGYG--EGKNLSNAVAGHVKAAKVTPKV-IREIRVNELDEI 64
Query: 479 PNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG 300
G L F VGD +D+ + +GF G +KR F +HG R+ G+IGS
Sbjct: 65 KVGDQLGVDLFIVGDNVDVTGTSKGKGFAGTVKRHNFNTSKKTHGGNGYVRKVGSIGSMY 124
Query: 299 EKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPG 162
+ +++ G +M G MG+ T++ + + ID + N+I G A+PG
Sbjct: 125 PQ-KIFKGKRMAGRMGHETVTVKNLSVAYIDAESNLIGLKG-AVPG 168
>UniRef50_A6QCP8 Cluster: 50S ribosomal protein L3; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L3 -
Sulfurovum sp. (strain NBC37-1)
Length = 193
Score = 59.3 bits (137), Expect = 1e-07
Identities = 38/88 (43%), Positives = 47/88 (53%)
Frame = -2
Query: 413 TMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTL 234
T RGF G MKR F G P SHG + RR G+IG+ RV G KMPG GN T+
Sbjct: 101 TKGRGFSGGMKRHNFGGGPGSHG-HRFGRRIGSIGNAEWPGRVQKGKKMPGQYGNTKVTV 159
Query: 233 RGVKILRIDTKYNVIWTLGVAIPGETGA 150
+ ++ D + N I L +IPG GA
Sbjct: 160 KN-DVVSFDAE-NGILVLKGSIPGHNGA 185
>UniRef50_Q9AIN8 Cluster: 50S ribosomal protein L3; n=4; Candidatus
Carsonella ruddii|Rep: 50S ribosomal protein L3 -
Carsonella ruddii
Length = 136
Score = 56.8 bits (131), Expect = 6e-07
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = -2
Query: 404 RGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 246
+GFQGV+KRW FK SHG + ++R G+ G + RV+ KMPG MGN+
Sbjct: 49 KGFQGVVKRWNFKTKDKSHGNSLSYRTLGSTGQCQDPGRVFKKKKMPGRMGNK 101
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 270
F+ GD ID+ + T +GFQG +KR+G + MP H K H R G++G +K + T
Sbjct: 188 FKEGDYIDVIAVTKGKGFQGSVKRFGVEEMPRWHKHRKGHSRIGSVGP--QKPAIMFYTP 245
Query: 269 MPGHMGNRWRTLRGVKILRI 210
PG +G RT +IL++
Sbjct: 246 FPGQLGFHQRTEYNKRILKV 265
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 54.0 bits (124), Expect = 4e-06
Identities = 30/80 (37%), Positives = 39/80 (48%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 270
F+ G+ +D T +GFQG +KRWG K H R G+IG K +W
Sbjct: 190 FQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMW-SVP 248
Query: 269 MPGHMGNRWRTLRGVKILRI 210
MPG MG RT +IL+I
Sbjct: 249 MPGQMGYHQRTEYNKRILKI 268
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 52.0 bits (119), Expect = 2e-05
Identities = 33/86 (38%), Positives = 44/86 (51%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 270
F+ G +D+ + T +GFQGV+KR F H K R+ G IGS G R++P
Sbjct: 183 FKEGQYVDVIAVTKGKGFQGVIKR--FHVHRRQHKSEKGVRKVGAIGSRG-PGRIFPTVP 239
Query: 269 MPGHMGNRWRTLRGVKILRIDTKYNV 192
MPG MG RT I++I NV
Sbjct: 240 MPGQMGYHRRTEYNKLIIKIGEPLNV 265
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/81 (38%), Positives = 40/81 (49%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 270
F G +D+ + T +GFQGV+KRWG K +P H K RR G G ++ W T
Sbjct: 197 FEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRRIGARSHG--RSTFWE-TP 253
Query: 269 MPGHMGNRWRTLRGVKILRID 207
G G RT +IL ID
Sbjct: 254 QAGQTGFHRRTEYNKRILMID 274
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 50.4 bits (115), Expect = 5e-05
Identities = 32/80 (40%), Positives = 40/80 (50%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 270
FR G IDI T +GFQGV+KR+G K +P H K R+ IGS T
Sbjct: 251 FREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGSRSPGFGTMSETP 307
Query: 269 MPGHMGNRWRTLRGVKILRI 210
PG MG RT +I++I
Sbjct: 308 QPGQMGFHRRTEYNKRIIKI 327
>UniRef50_P53307 Cluster: Uncharacterized protein YGR219W; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGR219W - Saccharomyces cerevisiae (Baker's yeast)
Length = 113
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/72 (36%), Positives = 38/72 (52%)
Frame = +3
Query: 186 PNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPNSCFFTTRTNITRSSMSFGDSMRSRHT 365
PNNIIF ++ +N N + V+H++RH S + T T SM +MR T
Sbjct: 37 PNNIIFIVDFQNFNILDSNMLVSHMTRHLSSWQYPTWVLVLTIRTTVSMHNRCTMRCSQT 96
Query: 366 LKTPPLHHSLKT 401
L++ P HH+ KT
Sbjct: 97 LESIPFHHTSKT 108
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/77 (36%), Positives = 37/77 (48%)
Frame = -2
Query: 440 GDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPG 261
G +D+ T +GFQGV+KR+G K +P H K RR G G + P PG
Sbjct: 217 GKFVDVIGVTKGKGFQGVIKRFGVKELPKWHKHRKGSRRVGARSWGKGTSSYVP---QPG 273
Query: 260 HMGNRWRTLRGVKILRI 210
MG RT ++L I
Sbjct: 274 QMGYHRRTDYNKRVLMI 290
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 43.6 bits (98), Expect = 0.006
Identities = 29/80 (36%), Positives = 42/80 (52%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 270
+ G +D+ T +G+QGV+KR+G K + SH +K R+ GN+G G V +
Sbjct: 215 YEAGKELDVVGITKGKGWQGVIKRFGVKLL--SHKNSKRRRQIGNMGDFG-TGYVRKTIR 271
Query: 269 MPGHMGNRWRTLRGVKILRI 210
G MG RT +ILRI
Sbjct: 272 QAGQMGYHKRTELNKRILRI 291
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 42.7 bits (96), Expect = 0.010
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 276
F G+ +D+ + T +GFQGV+KRW G+ T+ ++ +IGS G +RV
Sbjct: 196 FDEGEIVDVSAITKGKGFQGVVKRW---GVTIQDRKTQRKQKGRHIGSIGPITPSRVRWT 252
Query: 275 TKMPGHMGNRWRTLRGVKILRI 210
M G +G RT +IL+I
Sbjct: 253 VPMAGQVGYHQRTEHNKRILKI 274
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 41.9 bits (94), Expect = 0.018
Identities = 26/89 (29%), Positives = 37/89 (41%)
Frame = -2
Query: 473 GTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEK 294
G + FR G+ D T +G QG +KRWG + H RR GN+G
Sbjct: 184 GVHAFGDVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNP 242
Query: 293 ARVWPGTKMPGHMGNRWRTLRGVKILRID 207
+RV G G RT +++ I+
Sbjct: 243 SRVRSTVPQQGQTGYHQRTELNKRLIDIN 271
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 41.5 bits (93), Expect = 0.023
Identities = 26/80 (32%), Positives = 38/80 (47%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 270
F+ G ID+ T +GF GV+KR+ +P H K R+ IG+ G T
Sbjct: 209 FKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRK---IGTRGPSLGTPSYTP 265
Query: 269 MPGHMGNRWRTLRGVKILRI 210
PG +G RT +I++I
Sbjct: 266 QPGQLGFHRRTEYNKRIIKI 285
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 41.1 bits (92), Expect = 0.031
Identities = 26/91 (28%), Positives = 37/91 (40%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 270
F G+ +D+ + T G QG + RWG H T R GN+G W +
Sbjct: 193 FAPGELVDVSAITKGYGTQGPVVRWGIATQKRKHARTGKKRHVGNLGPWNPHRIRWQVPQ 252
Query: 269 MPGHMGNRWRTLRGVKILRIDTKYNVIWTLG 177
+ G G RT +IL++ K I G
Sbjct: 253 L-GQTGYHQRTEYNKRILKMGDKAEEITPAG 282
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 39.9 bits (89), Expect = 0.072
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = -2
Query: 440 GDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMP- 264
G +D+ S T +GF G ++R+G K +P + + HRR IG+ G W +P
Sbjct: 189 GKFVDVLSVTKGKGFTGHVQRFGVKLLPRKN---RKHRR--MIGTLGPWHPDWVRNTVPQ 243
Query: 263 -GHMGNRWRTLRGVKILR 213
G MG + RT+ V++L+
Sbjct: 244 AGQMGYQQRTISNVRVLK 261
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 39.5 bits (88), Expect = 0.095
Identities = 29/80 (36%), Positives = 39/80 (48%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 270
F G ID+ T G QGV++R+G K + SH +K R+ GN+G G V +
Sbjct: 195 FESGSDIDVIGVTKGYGNQGVVRRFGVKLL--SHKNSKRRRQIGNMGDFG-TGYVRKTIR 251
Query: 269 MPGHMGNRWRTLRGVKILRI 210
G G RT +ILRI
Sbjct: 252 QAGQTGYHQRTEYNKRILRI 271
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 38.3 bits (85), Expect = 0.22
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIG 309
F G +D+ + T +G+QGV+KRW K H KT R G++G
Sbjct: 191 FETGASVDVAAITKGKGWQGVLKRWNVK--KKQHKSRKTVREVGSLG 235
>UniRef50_A3XPQ6 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Leeuwenhoekiella
blandensis MED217|Rep: Putative outer membrane protein,
probably involved in nutrient binding - Leeuwenhoekiella
blandensis MED217
Length = 1057
Score = 35.5 bits (78), Expect = 1.5
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Frame = -2
Query: 659 PMIKSNVKWVEK--QKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPES 486
P++ NV W+E+ + YG N++ + Y + S+G + L F P
Sbjct: 317 PLLYPNVNWMEEVFKSYGRNRQALINVNGGAESARY---YVSLGYYNETGL--FQTDPNV 371
Query: 485 ALPNGTPLYATHFRVGDCIDIRSKT-MDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI- 312
+ +GT +F ID+ T ++ G QG + + G P S G+T + G
Sbjct: 372 SYDSGTGFERFNFTSNLTIDLTKTTDINVGIQGYLSDGNYPGTPTSPGITLEDQIFGTAL 431
Query: 311 -GSGGEKARVWPGTKMPGHMGN 249
E ++PG +PG N
Sbjct: 432 EAPPVEYPVLYPGGFVPGKSAN 453
>UniRef50_A5DTI2 Cluster: Predicted protein; n=1; Lodderomyces
elongisporus NRRL YB-4239|Rep: Predicted protein -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 319
Score = 35.5 bits (78), Expect = 1.5
Identities = 25/79 (31%), Positives = 33/79 (41%)
Frame = +3
Query: 174 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPNSCFFTTRTNITRSSMSFGDSMR 353
N NN NT N NTT + S + S CS ++ TT T T + DS +
Sbjct: 13 NISISNNSNNSNNTTNTNTTSTTKSFSSSSSSSCSSRSTT--TTTTTCTNDNNITSDSNK 70
Query: 354 SRHTLKTPPLHHSLKTSIH 410
+ H T H + SIH
Sbjct: 71 NDHASDTIYFHSTQMQSIH 89
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 35.5 bits (78), Expect = 1.5
Identities = 29/94 (30%), Positives = 41/94 (43%)
Frame = -2
Query: 491 ESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI 312
++ L P+++ F + ID+ + T RG +GV RW K +P K R+ I
Sbjct: 198 QARLEKQVPVHSV-FSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRK--THKGLRKVACI 254
Query: 311 GSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRI 210
G+ ARV G G RT KI RI
Sbjct: 255 GA-WHPARVGCSIARAGQKGYHHRTELNKKIFRI 287
>UniRef50_Q4DGU3 Cluster: Helicase-like protein, putative; n=1;
Trypanosoma cruzi|Rep: Helicase-like protein, putative -
Trypanosoma cruzi
Length = 929
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 373 PHLFITP*KPLSIVFDRMSIQSPTLK*VAYNGVPFGKADSGDTTNLQRCLFGSIPTLSN 549
PHL ++P L+ ++ +PTL+ V Y+G G+A T + C+F + P + N
Sbjct: 264 PHLIVSPLSTLTGWTRELARWAPTLRVVKYHGERKGRASIRTTRGNRHCVFVTTPAVFN 322
>UniRef50_A5WWD4 Cluster: Novel collagen protein; n=5; Danio
rerio|Rep: Novel collagen protein - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 1194
Score = 34.3 bits (75), Expect = 3.6
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -2
Query: 422 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGN 249
+ +T GFQG+ G G+P + GVT PG++G G K + P +PG G+
Sbjct: 478 QGETGPTGFQGLP---GPSGLPGAEGVTGKQGPPGSLGPQGSKGKQGP-IGLPGSPGS 531
>UniRef50_A2FG46 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1008
Score = 34.3 bits (75), Expect = 3.6
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = -2
Query: 698 NHVIKYIPPEEYKPMIKSNVKWVEKQKY 615
NH+ +IPPEEY+ ++ +NV++ +K+ +
Sbjct: 241 NHISPFIPPEEYECLMPNNVEYFKKKSF 268
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 33.9 bits (74), Expect = 4.7
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 276
F+ + D+ + T GF GV+KRWG +P KTHR + G +RV
Sbjct: 265 FQQSEACDVCAVTKGHGFTGVVKRWGVACLP-----RKTHRGLRKVACIGAWHPSRVMYT 319
Query: 275 TKMPGHMGNRWRTLRGVKILRI 210
G G RT KI ++
Sbjct: 320 VARAGQHGYHHRTHLNKKIYQL 341
>UniRef50_A1XVT1 Cluster: Fibrillar collagen precursor; n=1; Hydra
vulgaris|Rep: Fibrillar collagen precursor - Hydra
attenuata (Hydra) (Hydra vulgaris)
Length = 1476
Score = 33.9 bits (74), Expect = 4.7
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 407 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEK 294
+RG G+ G KG P G T + RPG+ G+ G+K
Sbjct: 580 ERGLPGIPGLQGMKGSPGLSGATGENGRPGDKGTQGDK 617
>UniRef50_UPI0000E46F0A Cluster: PREDICTED: similar to G/T
mismatch-specific thymine DNA glycosylase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
G/T mismatch-specific thymine DNA glycosylase -
Strongylocentrotus purpuratus
Length = 588
Score = 33.5 bits (73), Expect = 6.2
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = -2
Query: 494 PESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPG 318
P ALP P H ++S+ +D + G M GF G P HG + R PG
Sbjct: 288 PHPALPPPPPQQVPHHP-----GVKSEPVDGAYHGGMGGCGFPGQPPMHGGVEIKREPG 341
>UniRef50_Q5AG30 Cluster: Putative uncharacterized protein; n=3;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 814
Score = 33.5 bits (73), Expect = 6.2
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Frame = +3
Query: 177 TQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPNSCFFTTRTNITRSSM--SFGDSM 350
+Q PNN + N SPSV H S + F+TR + ++ S S
Sbjct: 119 SQLPNNSSSSLFINNRTRQPNSPSVNSQRGHSKSPSKNSHFSTRDEPIKENLKPSSESSS 178
Query: 351 RSRHTLKTP--PLHHSLKTSIHSF*SNVNTIPNSKM 452
S H+L++P PL K S S + P+S M
Sbjct: 179 ASTHSLESPITPLIRKTKPSSQSIQNQQQKSPSSSM 214
>UniRef50_A7TEL2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1686
Score = 33.5 bits (73), Expect = 6.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 749 WCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQ 621
W G + T+ + + N +I YIP + P+I+S +K + Q
Sbjct: 506 WESQGNEKDTSYIYNISNLIISYIPERAFLPLIESKIKVKDSQ 548
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 33.5 bits (73), Expect = 6.2
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 449 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 276
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 275 TKMPGHMGNRWRTLRGVKILRIDTKY 198
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>UniRef50_A4A686 Cluster: Putative uncharacterized protein; n=1;
Congregibacter litoralis KT71|Rep: Putative
uncharacterized protein - Congregibacter litoralis KT71
Length = 226
Score = 33.1 bits (72), Expect = 8.2
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +3
Query: 195 IIFCINTENLNTTQCSPSVTHVSRHFCSRPNSCFFTTRTNITRSSMSFGDSMRSRHTLKT 374
I CI +L T + VTH++RH + ++ T N R ++ G ++ S +
Sbjct: 45 ITLCIYAHDLKTLNRNVCVTHLARHLLAFEDATRGLTLANRARRTVRQGVTVGSILHAEV 104
Query: 375 PPLHHSLKTSIHSF*SNVN 431
P L+ +L+T SN++
Sbjct: 105 PTLNDALETFTLGLASNIH 123
>UniRef50_Q1DYA1 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 2124
Score = 33.1 bits (72), Expect = 8.2
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 428 DIRSKTMDRGFQGVMKRWG-FKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 252
D+ K +DR +GV K+WG F + G+ + R+ G + E G + PG +G
Sbjct: 2036 DVTDKDIDRFAEGVFKQWGLFSSEEENPGLGRLSRKNGKMADNSESGL---GLEEPGSVG 2092
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,712,128
Number of Sequences: 1657284
Number of extensions: 18048442
Number of successful extensions: 48287
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 44957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48105
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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