Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_K01
         (724 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   1.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.7  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   6.7  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   6.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.7  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   6.7  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   8.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -1

Query: 205 EDKVLC-CDWSNPSLLISGSS 146
           +D   C C W NPS ++ G++
Sbjct: 146 KDSTNCNCGWKNPSRIVGGTN 166


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 629 VFWFTFLRXWMVFFFC*ACTPKTNIV 706
           V W  F   +++  FC  C P   +V
Sbjct: 338 VCWLPFFLMYVIVPFCPDCCPSDRMV 363


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 629 VFWFTFLRXWMVFFFC*ACTPKTNIV 706
           V W  F   +++  FC  C P   +V
Sbjct: 338 VCWLPFFLMYVIVPFCPDCCPSDRMV 363


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 330 HPVCDVNVVFTILSVDLGSYSR 395
           HP  D+N ++ +   D+  YSR
Sbjct: 388 HPGKDINKLYGMTPSDIDKYSR 409


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 330 HPVCDVNVVFTILSVDLGSYSR 395
           HP  D+N ++ +   D+  YSR
Sbjct: 388 HPGKDINKLYGMTPSDIDKYSR 409


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 629 VFWFTFLRXWMVFFFC*ACTPKTNIV 706
           V W  F   +++  FC  C P   +V
Sbjct: 338 VCWLPFFLMYVIVPFCPDCCPSDRMV 363


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 330 HPVCDVNVVFTILSVDLGSYSR 395
           HP  D+N ++ +   D+  YSR
Sbjct: 326 HPGKDINKLYGMTPSDIDKYSR 347


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +2

Query: 218 VIKWSSWT 241
           V+KW+SWT
Sbjct: 146 VLKWASWT 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,321
Number of Sequences: 438
Number of extensions: 4317
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)