Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_J24
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 174 6e-44
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z50863-1|CAA90736.3| 353|Caenorhabditis elegans Hypothetical pr... 113 2e-25
Z81044-6|CAB02806.1| 360|Caenorhabditis elegans Hypothetical pr... 103 1e-22
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 75 5e-14
Z74042-16|CAA98527.3| 512|Caenorhabditis elegans Hypothetical p... 55 6e-08
Z74042-15|CAD54157.1| 505|Caenorhabditis elegans Hypothetical p... 55 6e-08
Z81110-4|CAB03256.1| 381|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z49966-7|CAD57696.1| 125|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical ... 29 3.3
AC025726-13|AAK73913.1| 77|Caenorhabditis elegans Lsm sm-like ... 29 3.3
Z92784-3|CAB07194.1| 318|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 28 5.8
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 28 5.8
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 174 bits (423), Expect = 6e-44
Identities = 81/123 (65%), Positives = 101/123 (82%), Gaps = 3/123 (2%)
Frame = -2
Query: 503 QEDIKIAGYLNLAADFTHNFTDGLAIGASFIAGQSIGYITTVTILLHEIPHEIGDFAILV 324
++ IK+ YLNLAADFTHNFTDGLAIGASFIAG ++G +T +T+L+HE+PHEIGDFAIL+
Sbjct: 308 EQSIKVTAYLNLAADFTHNFTDGLAIGASFIAGTTVGIVTMITVLVHEVPHEIGDFAILI 367
Query: 323 QSGCSRKKAMLLQLLTAFGAISGTFISIYLRGS---GEGLVSSLILPFTAGGFIYIATVS 153
QSG S+KKAML+QL+TA GA+SG IS++ + + SS +LPFTAGGFIYIATVS
Sbjct: 368 QSGYSKKKAMLIQLVTALGALSGCVISLFSADADALADAAASSWVLPFTAGGFIYIATVS 427
Query: 152 VXP 144
V P
Sbjct: 428 VIP 430
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -3
Query: 124 NNKFSQSIKEIIAXLAGVXMMGLIAQYE 41
N+ F Q++KEI A L G+ +M LIA YE
Sbjct: 435 NSSFFQTVKEIFAILTGIFLMYLIAIYE 462
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 155 bits (376), Expect = 3e-38
Identities = 75/122 (61%), Positives = 94/122 (77%), Gaps = 3/122 (2%)
Frame = -2
Query: 500 EDIKIAGYLNLAADFTHNFTDGLAIGASFIAGQSIGYITTVTILLHEIPHEIGDFAILVQ 321
+D+K + YLNL ADF HN TDGLAIGASF AG ++G+ITT+T+LLHE+PHE+GDFAILVQ
Sbjct: 231 KDVKASAYLNLVADFVHNVTDGLAIGASFSAGNTLGWITTLTVLLHELPHEVGDFAILVQ 290
Query: 320 SGCSRKKAMLLQLLTAFGAISGTFISIYLRGSG---EGLVSSLILPFTAGGFIYIATVSV 150
SG S+ +A+ LQ +TA GAI+G S+ + G +S I+PFTAGGFIYIATVSV
Sbjct: 291 SGFSKYQAIRLQAVTALGAITGCVFSLLVSNPGSLNNDADTSAIMPFTAGGFIYIATVSV 350
Query: 149 XP 144
P
Sbjct: 351 VP 352
>Z50863-1|CAA90736.3| 353|Caenorhabditis elegans Hypothetical
protein C14H10.1 protein.
Length = 353
Score = 113 bits (271), Expect = 2e-25
Identities = 55/120 (45%), Positives = 78/120 (65%)
Frame = -2
Query: 503 QEDIKIAGYLNLAADFTHNFTDGLAIGASFIAGQSIGYITTVTILLHEIPHEIGDFAILV 324
+E K YLNL A+ NF GLA+G+SF+ G +TT+TILLHEIPHEI DFAIL+
Sbjct: 202 EEQHKACAYLNLFANIGDNFAHGLAVGSSFLVSTKFGIMTTITILLHEIPHEISDFAILL 261
Query: 323 QSGCSRKKAMLLQLLTAFGAISGTFISIYLRGSGEGLVSSLILPFTAGGFIYIATVSVXP 144
++ + A+L QL TA + G+ ++++L S ++ +L LPFTAGGF+ IA + P
Sbjct: 262 RADFGKTNAILAQLTTAAFGVLGSLVALHLHTSNVPVIETL-LPFTAGGFLNIALTELLP 320
>Z81044-6|CAB02806.1| 360|Caenorhabditis elegans Hypothetical
protein C30H6.2 protein.
Length = 360
Score = 103 bits (248), Expect = 1e-22
Identities = 50/115 (43%), Positives = 74/115 (64%)
Frame = -2
Query: 494 IKIAGYLNLAADFTHNFTDGLAIGASFIAGQSIGYITTVTILLHEIPHEIGDFAILVQSG 315
+K + L D HN DGLA+GASF+ +G+ITT+ ++ HE+PHEIGD A+L+ SG
Sbjct: 230 LKPRALIILFGDGVHNLVDGLAMGASFMISVKLGFITTIAVICHELPHEIGDLAVLIDSG 289
Query: 314 CSRKKAMLLQLLTAFGAISGTFISIYLRGSGEGLVSSLILPFTAGGFIYIATVSV 150
S A++L LL+A A +G FI+I L E + +++L TAG F+Y+A V +
Sbjct: 290 LSMCTALILNLLSALTAYAGLFIAIVLGRDEE--IETILLAITAGMFLYVAWVDM 342
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 74.9 bits (176), Expect = 5e-14
Identities = 41/127 (32%), Positives = 65/127 (51%)
Frame = -2
Query: 494 IKIAGYLNLAADFTHNFTDGLAIGASFIAGQSIGYITTVTILLHEIPHEIGDFAILVQSG 315
I ++ + D HNF DG++IGA+F G ++ +L E PHE+GD AILV SG
Sbjct: 300 IAAVAWMIVFGDGLHNFIDGISIGAAFAESLHSGLSISLAVLCEEFPHELGDVAILVASG 359
Query: 314 CSRKKAMLLQLLTAFGAISGTFISIYLRGSGEGLVSSLILPFTAGGFIYIATVSVXP*VI 135
+ K+A++ LL+A G FI + + G S G F+YI+ + P +
Sbjct: 360 MTLKQALIYNLLSAITCYVGFFIGVGIGELGPD-TSKYAFGLAGGMFLYISLACMMPEMK 418
Query: 134 GRLEQQI 114
+E+ +
Sbjct: 419 KAMEEAL 425
>Z74042-16|CAA98527.3| 512|Caenorhabditis elegans Hypothetical
protein T11F9.2b protein.
Length = 512
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/118 (25%), Positives = 57/118 (48%)
Frame = -2
Query: 497 DIKIAGYLNLAADFTHNFTDGLAIGASFIAGQSIGYITTVTILLHEIPHEIGDFAILVQS 318
++ Y+ + +NF DG+++GA+F G + ++ + P E+G AILV+S
Sbjct: 350 EVASVAYMIIFGSSANNFVDGMSMGAAFSDNLLRGLSIGIAVISQQFPQELGTLAILVKS 409
Query: 317 GCSRKKAMLLQLLTAFGAISGTFISIYLRGSGEGLVSSLILPFTAGGFIYIATVSVXP 144
G KK +L ++ + G I + L S + I ++G ++YI ++ P
Sbjct: 410 GLGLKKTLLFNMVPIVLSFLGFSIGVML-DSVDDSYDEYIFAISSGMYMYIFLGTLIP 466
>Z74042-15|CAD54157.1| 505|Caenorhabditis elegans Hypothetical
protein T11F9.2a protein.
Length = 505
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/118 (25%), Positives = 57/118 (48%)
Frame = -2
Query: 497 DIKIAGYLNLAADFTHNFTDGLAIGASFIAGQSIGYITTVTILLHEIPHEIGDFAILVQS 318
++ Y+ + +NF DG+++GA+F G + ++ + P E+G AILV+S
Sbjct: 343 EVASVAYMIIFGSSANNFVDGMSMGAAFSDNLLRGLSIGIAVISQQFPQELGTLAILVKS 402
Query: 317 GCSRKKAMLLQLLTAFGAISGTFISIYLRGSGEGLVSSLILPFTAGGFIYIATVSVXP 144
G KK +L ++ + G I + L S + I ++G ++YI ++ P
Sbjct: 403 GLGLKKTLLFNMVPIVLSFLGFSIGVML-DSVDDSYDEYIFAISSGMYMYIFLGTLIP 459
>Z81110-4|CAB03256.1| 381|Caenorhabditis elegans Hypothetical
protein T01D3.5 protein.
Length = 381
Score = 47.6 bits (108), Expect = 9e-06
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Frame = -2
Query: 452 HNFTDGLAIGASFIAGQS-IGYITTVTILLHEIPHEIGDFAILVQSGCSRK---KAMLLQ 285
H DG+A+G++ + +S + I V I+LH+ P G + L+ R+ K +++
Sbjct: 217 HAAADGVALGSASVINKSDVQIIVFVAIMLHKAPAAFGLVSFLLMESIDRRAIRKHLVVF 276
Query: 284 LLTAFGAISGTFISIYLRGSGEGLVSS--LILPFTAGGFIYIATVSVXP 144
A A TF+ I G SS +++ F+AG F+Y+ATV V P
Sbjct: 277 SAAAPLAALVTFVLIMQMGESMRSESSTGVLMLFSAGTFLYVATVHVLP 325
>Z49966-7|CAD57696.1| 125|Caenorhabditis elegans Hypothetical
protein F35C11.7 protein.
Length = 125
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 241 IEIKVPEIAPKAVSNCNSIAFFLEQPDWTKMAKSPISCGISCR 369
IEI++P AP++ ++C S A +L DW+ + SCG+ R
Sbjct: 26 IEIQIPTNAPQSSTSC-STATWLVWSDWSTCSDECGSCGVQMR 67
>AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical
protein B0281.8 protein.
Length = 292
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 362 EIPHEIGDFAILVQSGCSRKKAMLLQLLTAFGAISG 255
E P+ + +FA ++S CS K ++ Q FGA G
Sbjct: 97 EHPYNVAEFAC-IESNCSSKNKLMCQTCEEFGAHKG 131
>AC025726-13|AAK73913.1| 77|Caenorhabditis elegans Lsm sm-like
protein protein 6 protein.
Length = 77
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -2
Query: 482 GYLNLAADFTHNFTDGL---AIGASFIAGQSIGYITTVT 375
GY+N+A + T +++G G +FI G ++ YI+T T
Sbjct: 38 GYMNIALEQTEEYSNGQLQNKYGDAFIRGNNVLYISTST 76
>Z92784-3|CAB07194.1| 318|Caenorhabditis elegans Hypothetical
protein F31C3.4 protein.
Length = 318
Score = 28.7 bits (61), Expect = 4.4
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Frame = -2
Query: 452 HNFTDGLAIGASFIAGQSIGYITTVTILLHEIPHEIGDFAILVQSGCSRKKAMLLQLLTA 273
H +GL++ + A Q + ++LH+ LVQ+ + L Q L +
Sbjct: 177 HALFEGLSLAVTSDASQLLQIFGA--LILHKCIMGFCLGVRLVQANLTTPWIALAQFLFS 234
Query: 272 ----FGAISGTFISIYLRGSGEG---LVSSLILPFTAGGFIYIATVSVXP 144
G ++G I ++ G + +VSS++ G F+YI T V P
Sbjct: 235 VQVLIGGLAGIGIMKFISGGEQSFAAIVSSILQAIACGTFLYITTFEVIP 284
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 178 PPAVKGNIRDETRPSPEPLK*IEIKVPEIAPKAVSNCNSIAFFLEQPDWTKMAKSPIS 351
P + + + + RP +P+K EIKV E V + + F+ P T KSP S
Sbjct: 499 PSPDRQSCKKDARPDQDPIKLSEIKVSE----HVDSTGNETFYQSFPKATSTPKSPAS 552
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 178 PPAVKGNIRDETRPSPEPLK*IEIKVPEIAPKAVSNCNSIAFFLEQPDWTKMAKSPIS 351
P + + + + RP +P+K EIKV E V + + F+ P T KSP S
Sbjct: 499 PSPDRQSCKKDARPDQDPIKLSEIKVSE----HVDSTGNETFYQSFPKATSTPKSPAS 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,359,768
Number of Sequences: 27780
Number of extensions: 275909
Number of successful extensions: 735
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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