Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_J20
         (796 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375...    29   5.6  
04_03_0933 + 20906482-20906660,20907770-20907832,20910028-209101...    28   9.8  

>03_05_0175 +
           21513767-21513903,21534361-21535385,21537375-21537547,
           21537849-21538679
          Length = 721

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 689 SAWACLYILLSNTIIMYYSVQHIVC 615
           S+W  LY L+S  I+  +SV  I C
Sbjct: 335 SSWGLLYFLISYNIVSEFSVDEIFC 359


>04_03_0933 +
           20906482-20906660,20907770-20907832,20910028-20910144,
           20910433-20910688,20910788-20910946,20911052-20911203,
           20911310-20911454
          Length = 356

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = -3

Query: 722 SCIEIIKVEVFSAWACLYILLSNTIIMYYSVQHIVCCCHTCVLCKYALCVH 570
           S + II    ++ W  +   +S     +YS+  +VC          ALCVH
Sbjct: 188 SFLGIISCFTYATWLVIQAKVSKVYPCHYSIAAMVCLFGALQSTVMALCVH 238


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,535,350
Number of Sequences: 37544
Number of extensions: 310159
Number of successful extensions: 468
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)