Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_J04
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 315 3e-86
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 235 2e-62
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 176 2e-44
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 147 8e-36
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 107 1e-23
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 36 0.029
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 36 0.029
AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical ... 29 3.3
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 29 4.4
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 4.4
Z92804-5|CAD89722.2| 320|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 28 7.7
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 315 bits (773), Expect = 3e-86
Identities = 151/273 (55%), Positives = 195/273 (71%)
Frame = -3
Query: 875 GPSTCRQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGXQTGAQDIILAGGMESMSNV 696
G + RQA + AGL S TTVNKVC+SG+K+I+LAAQ QTG QD + GGMESMS V
Sbjct: 82 GQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGMESMSQV 141
Query: 695 PFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSY 516
PFY++RGE YGG Q++DGIV DGLTD Y+K HMGNC E T+K++ ITR+DQDEYA+NSY
Sbjct: 142 PFYVQRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDEYAINSY 201
Query: 515 KRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVT 336
K+SA A+E E+VPV V K+G ++ +DEE+ +VNF+KFT L TVFQK+ GT+T
Sbjct: 202 KKSAKAWENGNIGPEVVPVNVKSKKGVTIV-DKDEEFTKVNFDKFTSLRTVFQKD-GTIT 259
Query: 335 AGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEK 156
A NASTLNDG ++KP+ARI+ + D P+DF +AP + PK+LE+
Sbjct: 260 AANASTLNDGAAAVIVASQEAVSEQSLKPLARILAYGDAATHPLDFAVAPTLMFPKILER 319
Query: 155 TGVRKEDVALWEINEAFSVVAVANQKLLGLDPS 57
GV++ DVA WE+NEAFS V +A K LG+DPS
Sbjct: 320 AGVKQSDVAQWEVNEAFSCVPLAFIKKLGVDPS 352
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 52 INVHGGAVSLGHP 14
+N HGGAVS+GHP
Sbjct: 354 VNPHGGAVSIGHP 366
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 235 bits (576), Expect = 2e-62
Identities = 122/274 (44%), Positives = 172/274 (62%), Gaps = 1/274 (0%)
Frame = -3
Query: 875 GPSTCRQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGXQTGAQDIILAGGMESMSNV 696
G + RQ + AGLP +T TVNKVC+S MK+++ AA + G D IL G E+MS V
Sbjct: 64 GQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENMSQV 123
Query: 695 PFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSY 516
PFY+ RGE +GG+Q+ DGI DGL D+ K MG CAE T K ITR++QD YA+ SY
Sbjct: 124 PFYVPRGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAIESY 183
Query: 515 KRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKE-NGTV 339
K+++ A+ ++ F +E+VPV V R + V+ EDEEYK++ K + L VF ++ GT+
Sbjct: 184 KKASNAWSSEKFSEEVVPVSVKTSR-SEVVITEDEEYKKLIESKVSSLKPVFVRDGTGTI 242
Query: 338 TAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLE 159
T NAS+LNDG + P+A +V FA+ PIDF +AP A+ LL+
Sbjct: 243 TPANASSLNDGAVATVVVGENALPQ-GAHPLAELVAFAEAGRAPIDFTVAPVDAVRLLLK 301
Query: 158 KTGVRKEDVALWEINEAFSVVAVANQKLLGLDPS 57
K+G++ D+ALWE+NEAF+V +A K L ++PS
Sbjct: 302 KSGLQVSDIALWELNEAFAVTVLAFIKELNIEPS 335
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 176 bits (428), Expect = 2e-44
Identities = 97/265 (36%), Positives = 155/265 (58%), Gaps = 2/265 (0%)
Frame = -3
Query: 842 AGLPKSTICTTVNKVCASGMKSIMLAAQGXQTGAQDIILAGGMESMSNVPFYLK--RGET 669
+G+P++ TVN++C SG ++++ AAQ + G +I+LAGG E+MS VPF ++ R T
Sbjct: 76 SGVPQNVGALTVNRLCGSGFQAVVNAAQAIKLGESNIVLAGGTENMSMVPFAVRDIRFGT 135
Query: 668 SYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEA 489
+ G + +++D L+D Y K MG AE + ++TRQ+ DE+A+ S A EA
Sbjct: 136 ALGKKYEFEDMLWDSLSDPYAKLAMGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEA 195
Query: 488 KAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLND 309
+ +E+V + + ++G F DE + E KL VFQK+ G V AGNAS ++D
Sbjct: 196 GVYKNEIVGITIKGRKGEES-FEIDEHPRATTAESLAKLKPVFQKD-GLVNAGNASGISD 253
Query: 308 GXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVA 129
G K N+KP+AR+V ++ CDP I PA AI ++L+K+G++ D+
Sbjct: 254 GAAALVVAGEDSVKSKNLKPLARVVAYSAVGCDPTIMGIGPAPAIREVLKKSGLKIGDID 313
Query: 128 LWEINEAFSVVAVANQKLLGLDPSK 54
++E+NEAF+ A+A Q+ LG+ K
Sbjct: 314 IFEVNEAFAPQALAVQRELGIPMEK 338
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/15 (66%), Positives = 15/15 (100%)
Frame = -1
Query: 58 QKINVHGGAVSLGHP 14
+K+NV+GGA++LGHP
Sbjct: 337 EKLNVNGGAIALGHP 351
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 147 bits (357), Expect = 8e-36
Identities = 97/273 (35%), Positives = 140/273 (51%)
Frame = -3
Query: 875 GPSTCRQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGXQTGAQDIILAGGMESMSNV 696
G ++ RQA + AGL S TTVNK +SGMK+I+LAAQ QTG QD+ + GGMESMS V
Sbjct: 162 GQASARQAALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTGHQDLAIGGGMESMSQV 221
Query: 695 PFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSY 516
PF+L R E S Q V+ V DG++D + D+ E +N
Sbjct: 222 PFFLARVEQSSNKYQ-VEQTVQDGISDFF---------------------DKQELCINGE 259
Query: 515 KRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVT 336
+ + E+V V V K+G + +D+ K ++ + S++ GT++
Sbjct: 260 RTNGN------IGPEVVAVNVKSKKGVEAV-KQDDITKIKKIKEGSVYSSIPIFPGGTIS 312
Query: 335 AGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEK 156
+ + DG N+KP+ARI+ + D +DF +AP + P LL+
Sbjct: 313 DKHIAAFTDGAAAVILASQEAVSEQNLKPLARILAYGDAATHQLDFAVAPTLLFPNLLQS 372
Query: 155 TGVRKEDVALWEINEAFSVVAVANQKLLGLDPS 57
GV + DVA WE+NEAFS V +A K LG+DPS
Sbjct: 373 AGVEQSDVAQWEVNEAFSCVPLAFIKKLGVDPS 405
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 52 INVHGGAVSLGHP 14
+N HGGAVS+GHP
Sbjct: 407 VNPHGGAVSIGHP 419
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 107 bits (256), Expect = 1e-23
Identities = 85/285 (29%), Positives = 133/285 (46%), Gaps = 19/285 (6%)
Frame = -3
Query: 860 RQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGXQTGAQDIILAGGMESMSNVPF-YL 684
R+A + AG+P TV C S ++ TG + I+AGG+E +S+VP Y
Sbjct: 89 REAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELLSDVPIRYN 148
Query: 683 KRGETSYGGM--------------QLVDGIV---FDGLTDVYNKFHMGNCAENTAKKLQI 555
+ + GM Q+V ++ + + MG+ + A +
Sbjct: 149 RNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGETMGHSGDRLAAAFNV 208
Query: 554 TRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTK 375
+R++QDE+A+ S+ ++ A + F D +VPV + K+ P ED + EK +
Sbjct: 209 SRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK--PKTIKEDNGIRVSTLEKLSS 265
Query: 374 LSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPID-F 198
L F K +GTVTA NAS L DG A KP A + + DP D
Sbjct: 266 LKPAFVKPHGTVTAANASYLTDGASAALIMTEEYALANGYKPKAYLRDYLYVAQDPKDQL 325
Query: 197 PIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLD 63
++PA IPKLL+K G+ +DV ++EI+EAF+ +AN + D
Sbjct: 326 LLSPAYVIPKLLDKAGLTLKDVDVFEIHEAFAGQVLANLNAMDSD 370
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 875 GPSTCRQAVIF-AGLPKSTICTTVNKVCASGMKSIMLAAQGXQTGAQDIILAGGMESMS 702
G + C Q ++ GL I VN CASG + L Q ++G D++L G E M+
Sbjct: 61 GGTCCGQRALYEVGLTGIPIFN-VNNACASGSSGLFLGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 875 GPSTCRQAVIF-AGLPKSTICTTVNKVCASGMKSIMLAAQGXQTGAQDIILAGGMESMS 702
G + C Q ++ GL I VN CASG + L Q ++G D++L G E M+
Sbjct: 61 GGTCCGQRALYEVGLTGIPIFN-VNNACASGSSGLFLGKQIIESGNSDVVLCAGFERMA 118
>AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical
protein C43H8.1 protein.
Length = 155
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 647 VDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 525
+DG++F L + N FH C AK+++I R D+ ++ +
Sbjct: 72 LDGLLFQFLDEALNSFHAEPCF--VAKRVEILRFDKKKFEI 110
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -3
Query: 551 RQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKL 372
R++ A +R AA A A P P P K PV+F+++ + + TK
Sbjct: 15 REEAIRRAAAYREREMAAANATASTSSAAP-PAPPKPVIPVMFSQNRQPMKPTMNNSTKQ 73
Query: 371 STV 363
ST+
Sbjct: 74 STI 76
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 855 SCNICRFAKKYHMYNCKQSMCLWHEI 778
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
>Z92804-5|CAD89722.2| 320|Caenorhabditis elegans Hypothetical
protein K05D4.8 protein.
Length = 320
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 402 FILFIFSKYYRSPSFLWNGYWY 467
F+L I SK+ P FL+NG W+
Sbjct: 230 FLLIIASKFIYIPIFLFNGDWF 251
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -3
Query: 491 AKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVT 336
A AFV + VP+ Q RG +FA+ ++ + F+K +S NG+V+
Sbjct: 169 AAAFVSGMTAVPI-QIRGR-TLFAQYSTHRELKFDKNKAISDTESVANGSVS 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,603,918
Number of Sequences: 27780
Number of extensions: 407625
Number of successful extensions: 1212
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -