Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_J03
(844 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069635-1|AAL39780.1| 330|Drosophila melanogaster LD40326p pro... 250 1e-66
AE014296-2014|AAF50022.2| 330|Drosophila melanogaster CG7319-PA... 250 1e-66
AE014296-2013|AAS65037.1| 518|Drosophila melanogaster CG7319-PC... 250 1e-66
AY061429-1|AAL28977.1| 306|Drosophila melanogaster LD35950p pro... 50 3e-06
AE014297-4308|AAF56847.1| 306|Drosophila melanogaster CG11837-P... 50 3e-06
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 31 2.6
AE014297-3216|AAF56047.1| 775|Drosophila melanogaster CG13842-P... 29 8.0
>AY069635-1|AAL39780.1| 330|Drosophila melanogaster LD40326p
protein.
Length = 330
Score = 250 bits (613), Expect = 1e-66
Identities = 132/263 (50%), Positives = 170/263 (64%), Gaps = 1/263 (0%)
Frame = -1
Query: 844 GITRXIIRQAPKKLVLIEKDPRFLPSLELLADACRD-KVDVDIITGDILKTDLSQFIPND 668
GITR I+R+ P++L+L+EKDPRF +L+LL + + DI DIL+ ++ Q IP
Sbjct: 72 GITRSILRRHPQRLLLVEKDPRFGETLQLLKECASPLNIQFDIHYDDILRFNIEQHIP-- 129
Query: 667 AKVHWLDPPPPVHLIGNLPFSVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEVAERM 488
D +HLIGNLPF++ST L+I WL+ ++ G + T MTLTFQ+EVAER+
Sbjct: 130 ------DTSQRIHLIGNLPFAISTRLLINWLDDLAARRGAFRRIDTCMTLTFQQEVAERI 183
Query: 487 AARILDKQRCRLSVMCQSWCTVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKL 308
A + +QRCRLSVM Q W F IPG AF+PKP VDVGVV L PLK P +LPF L
Sbjct: 184 CAPVGGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHL 243
Query: 307 AEKVVRQIFSMRQKYSIRGAQTLFPEEVREEVALKMYNIADIDPVTRPFQITNMEFARLC 128
E+VVR IFSMRQKY RG TL P E REEVA K++ A++ RPF++T + RL
Sbjct: 244 VERVVRHIFSMRQKYCRRGYGTLLPPEDREEVAEKLFQRAEVQDTLRPFELTVEQCLRLA 303
Query: 127 EAYNDIIKQHPEFEHYDYRAPKN 59
E Y++ + PE YDYRAPKN
Sbjct: 304 EVYSEHLVTRPEVAAYDYRAPKN 326
>AE014296-2014|AAF50022.2| 330|Drosophila melanogaster CG7319-PA,
isoform A protein.
Length = 330
Score = 250 bits (613), Expect = 1e-66
Identities = 132/263 (50%), Positives = 170/263 (64%), Gaps = 1/263 (0%)
Frame = -1
Query: 844 GITRXIIRQAPKKLVLIEKDPRFLPSLELLADACRD-KVDVDIITGDILKTDLSQFIPND 668
GITR I+R+ P++L+L+EKDPRF +L+LL + + DI DIL+ ++ Q IP
Sbjct: 72 GITRSILRRHPQRLLLVEKDPRFGETLQLLKECASPLNIQFDIHYDDILRFNIEQHIP-- 129
Query: 667 AKVHWLDPPPPVHLIGNLPFSVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEVAERM 488
D +HLIGNLPF++ST L+I WL+ ++ G + T MTLTFQ+EVAER+
Sbjct: 130 ------DTSQRIHLIGNLPFAISTRLLINWLDDLAARRGAFRRIDTCMTLTFQQEVAERI 183
Query: 487 AARILDKQRCRLSVMCQSWCTVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKL 308
A + +QRCRLSVM Q W F IPG AF+PKP VDVGVV L PLK P +LPF L
Sbjct: 184 CAPVGGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHL 243
Query: 307 AEKVVRQIFSMRQKYSIRGAQTLFPEEVREEVALKMYNIADIDPVTRPFQITNMEFARLC 128
E+VVR IFSMRQKY RG TL P E REEVA K++ A++ RPF++T + RL
Sbjct: 244 VERVVRHIFSMRQKYCRRGYGTLLPPEDREEVAEKLFQRAEVQDTLRPFELTVEQCLRLA 303
Query: 127 EAYNDIIKQHPEFEHYDYRAPKN 59
E Y++ + PE YDYRAPKN
Sbjct: 304 EVYSEHLVTRPEVAAYDYRAPKN 326
>AE014296-2013|AAS65037.1| 518|Drosophila melanogaster CG7319-PC,
isoform C protein.
Length = 518
Score = 250 bits (613), Expect = 1e-66
Identities = 132/263 (50%), Positives = 170/263 (64%), Gaps = 1/263 (0%)
Frame = -1
Query: 844 GITRXIIRQAPKKLVLIEKDPRFLPSLELLADACRD-KVDVDIITGDILKTDLSQFIPND 668
GITR I+R+ P++L+L+EKDPRF +L+LL + + DI DIL+ ++ Q IP
Sbjct: 260 GITRSILRRHPQRLLLVEKDPRFGETLQLLKECASPLNIQFDIHYDDILRFNIEQHIP-- 317
Query: 667 AKVHWLDPPPPVHLIGNLPFSVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEVAERM 488
D +HLIGNLPF++ST L+I WL+ ++ G + T MTLTFQ+EVAER+
Sbjct: 318 ------DTSQRIHLIGNLPFAISTRLLINWLDDLAARRGAFRRIDTCMTLTFQQEVAERI 371
Query: 487 AARILDKQRCRLSVMCQSWCTVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKL 308
A + +QRCRLSVM Q W F IPG AF+PKP VDVGVV L PLK P +LPF L
Sbjct: 372 CAPVGGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHL 431
Query: 307 AEKVVRQIFSMRQKYSIRGAQTLFPEEVREEVALKMYNIADIDPVTRPFQITNMEFARLC 128
E+VVR IFSMRQKY RG TL P E REEVA K++ A++ RPF++T + RL
Sbjct: 432 VERVVRHIFSMRQKYCRRGYGTLLPPEDREEVAEKLFQRAEVQDTLRPFELTVEQCLRLA 491
Query: 127 EAYNDIIKQHPEFEHYDYRAPKN 59
E Y++ + PE YDYRAPKN
Sbjct: 492 EVYSEHLVTRPEVAAYDYRAPKN 514
>AY061429-1|AAL28977.1| 306|Drosophila melanogaster LD35950p
protein.
Length = 306
Score = 50.4 bits (115), Expect = 3e-06
Identities = 60/219 (27%), Positives = 92/219 (42%)
Frame = -1
Query: 811 KKLVLIEKDPRFLPSLELLADACRDKVDVDIITGDILKTDLSQFIPNDAKVHWLDPPPPV 632
KK++ E D R L+ A + + ++ GD LK +L F D
Sbjct: 72 KKVIACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFF---DL----------- 117
Query: 631 HLIGNLPFSVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEVAERMAARILDKQRCRL 452
I N+P+ +S+ LI + L H LF L FQ+E AER+ A+ DK CRL
Sbjct: 118 -CIANVPYQISSPLIFKLL----LHRP--LFRCA--VLMFQREFAERLVAKPGDKLYCRL 168
Query: 451 SVMCQSWCTVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKLAEKVVRQIFSMR 272
S+ Q V + F P P V+ VV L P K+P + F + + R F +
Sbjct: 169 SINTQLLARVDMLMKVGKNNFRPPPKVESSVVRLEP-KNPPPPVNFTEWDGLTRIAFLRK 227
Query: 271 QKYSIRGAQTLFPEEVREEVALKMYNIADIDPVTRPFQI 155
K + E+ E+ K+Y +P+ F++
Sbjct: 228 NKTLAATFKVTSVLEMLEK-NYKLYRSLRNEPIEDDFKM 265
>AE014297-4308|AAF56847.1| 306|Drosophila melanogaster CG11837-PA
protein.
Length = 306
Score = 50.4 bits (115), Expect = 3e-06
Identities = 60/219 (27%), Positives = 92/219 (42%)
Frame = -1
Query: 811 KKLVLIEKDPRFLPSLELLADACRDKVDVDIITGDILKTDLSQFIPNDAKVHWLDPPPPV 632
KK++ E D R L+ A + + ++ GD LK +L F D
Sbjct: 72 KKVIACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFF---DL----------- 117
Query: 631 HLIGNLPFSVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEVAERMAARILDKQRCRL 452
I N+P+ +S+ LI + L H LF L FQ+E AER+ A+ DK CRL
Sbjct: 118 -CIANVPYQISSPLIFKLL----LHRP--LFRCA--VLMFQREFAERLVAKPGDKLYCRL 168
Query: 451 SVMCQSWCTVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKLAEKVVRQIFSMR 272
S+ Q V + F P P V+ VV L P K+P + F + + R F +
Sbjct: 169 SINTQLLARVDMLMKVGKNNFRPPPKVESSVVRLEP-KNPPPPVNFTEWDGLTRIAFLRK 227
Query: 271 QKYSIRGAQTLFPEEVREEVALKMYNIADIDPVTRPFQI 155
K + E+ E+ K+Y +P+ F++
Sbjct: 228 NKTLAATFKVTSVLEMLEK-NYKLYRSLRNEPIEDDFKM 265
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 30.7 bits (66), Expect = 2.6
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = -1
Query: 469 KQRCRLSVMCQSWCTVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKLAEKVVR 290
+++ L+ +C+ + + YN + P T F K + + TP+ + PF +V +
Sbjct: 276 EEKTALTTLCKQFRDIFYNPETPLT-FTNKITHSIPTIDNTPIHTKSYRYPFVHKTEVKK 334
Query: 289 QIFSMRQKYSIRGAQT 242
QI SM + IR + +
Sbjct: 335 QIESMLDQQIIRSSHS 350
>AE014297-3216|AAF56047.1| 775|Drosophila melanogaster CG13842-PA
protein.
Length = 775
Score = 29.1 bits (62), Expect = 8.0
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = -1
Query: 331 IIKLPFKL-AEKVVRQIFSMRQKYSIRGAQTLFPE--EVREEV-ALKMYNIADIDPVTRP 164
I+KL KL E + I+ R ++S+ GA L + +VRE + A + + +D
Sbjct: 638 ILKLILKLICEAWLDFIYQKRIRFSVNGAVRLLNDFDDVREWILACSLLDEEQLD----- 692
Query: 163 FQITNMEFARLCEAYNDIIKQHPEFEHYDYRAPK--NKTNLINAEEVNLECNM 11
+++N E R+C+ I+ + PE ++PK K +A++ L M
Sbjct: 693 -KLSNHEVLRMCKGVGKILLRKPEDVISITQSPKYDKKAQDASAQDTQLPSEM 744
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,662,903
Number of Sequences: 53049
Number of extensions: 860312
Number of successful extensions: 1883
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1880
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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