Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_J03
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88169-5|AAB42235.2| 367|Caenorhabditis elegans Hypothetical pr... 193 1e-49
Z47075-1|CAA87382.2| 308|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U49830-7|AAM98046.1| 774|Caenorhabditis elegans Neuronal igcam ... 32 0.44
U49830-6|AAK31481.1| 964|Caenorhabditis elegans Neuronal igcam ... 32 0.44
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ... 32 0.44
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ... 32 0.44
Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81593-4|CAB04742.1| 334|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 28 9.5
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 28 9.5
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 28 9.5
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 28 9.5
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 28 9.5
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 28 9.5
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 28 9.5
AJ002903-1|CAA05738.1| 53|Caenorhabditis elegans protein tyros... 28 9.5
>U88169-5|AAB42235.2| 367|Caenorhabditis elegans Hypothetical
protein T03F1.7 protein.
Length = 367
Score = 193 bits (471), Expect = 1e-49
Identities = 109/282 (38%), Positives = 164/282 (58%), Gaps = 5/282 (1%)
Frame = -1
Query: 844 GITRXIIRQAPKKLVLIEKDPRFLPSLELLADACRDKVDVDIITGDILKTDLSQFIPNDA 665
GITR I+ +L ++E D RF+P L+ LA+A ++ + D L+T++ N+
Sbjct: 63 GITRAILEAGASRLDVVEIDNRFIPPLQHLAEAADSRMFIH--HQDALRTEIGDIWKNET 120
Query: 664 ----KVHWLDPP-PPVHLIGNLPFSVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEV 500
V W D P +H+IGNLPF++++ LII++L +S G W +GR +TLTFQ EV
Sbjct: 121 ARPESVDWHDSNLPAMHVIGNLPFNIASPLIIKYLRDMSYRRGVWQYGRVPLTLTFQLEV 180
Query: 499 AERMAARILDKQRCRLSVMCQSWCTVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKL 320
A+R+ + I R R+S+M Q K F I G+ F+P+P VDVGVV P K P++
Sbjct: 181 AKRLCSPIACDTRSRISIMSQYVAEPKMVFQISGSCFVPRPQVDVGVVRFVPRKTPLVNT 240
Query: 319 PFKLAEKVVRQIFSMRQKYSIRGAQTLFPEEVREEVALKMYNIADIDPVTRPFQITNMEF 140
F++ EKV RQ+F RQKY +G +TL+PEE+ +E++ + IDP T ++ +F
Sbjct: 241 SFEVLEKVCRQVFHYRQKYVTKGLKTLYPEELEDELSDDLLKKCRIDPTTTSIRLGIEQF 300
Query: 139 ARLCEAYNDIIKQHPEFEHYDYRAPKNKTNLINAEEVNLECN 14
A L E YN+ ++P YDY NK L N E+++ E N
Sbjct: 301 ADLAEGYNEQCIRYPGLFLYDY---TNK--LHNLEDLSKEPN 337
>Z47075-1|CAA87382.2| 308|Caenorhabditis elegans Hypothetical
protein E02H1.1 protein.
Length = 308
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/85 (38%), Positives = 43/85 (50%)
Frame = -1
Query: 520 LTFQKEVAERMAARILDKQRCRLSVMCQSWCTVKYNFDIPGTAFLPKPDVDVGVVTLTPL 341
L FQKE A+R+ AR DK RLSV Q V+ + T F P P VD VV + P
Sbjct: 147 LMFQKEFADRLVARPGDKDYSRLSVNVQLLAKVEMLMKVKRTEFRPPPKVDSAVVRIAP- 205
Query: 340 KHPIIKLPFKLAEKVVRQIFSMRQK 266
K+P + F E ++R F + K
Sbjct: 206 KNPPPPVNFVEWEGLLRLCFMRKNK 230
>U49830-7|AAM98046.1| 774|Caenorhabditis elegans Neuronal igcam
protein 6, isoform c protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 130 CEAYNDIIKQHPEFEHYDYRAPKNKTNLINAEEVNLECNM 11
C A+N + K H + + P KTN ++ E VN+ C +
Sbjct: 188 CTAHNKLGKAHAQVQLIVVNKPSIKTNFLDEETVNMSCEV 227
>U49830-6|AAK31481.1| 964|Caenorhabditis elegans Neuronal igcam
protein 6, isoform a protein.
Length = 964
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 130 CEAYNDIIKQHPEFEHYDYRAPKNKTNLINAEEVNLECNM 11
C A+N + K H + + P KTN ++ E VN+ C +
Sbjct: 378 CTAHNKLGKAHAQVQLIVVNKPSIKTNFLDEETVNMSCEV 417
>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
protein 6, isoform b protein.
Length = 1227
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 130 CEAYNDIIKQHPEFEHYDYRAPKNKTNLINAEEVNLECNM 11
C A+N + K H + + P KTN ++ E VN+ C +
Sbjct: 641 CTAHNKLGKAHAQVQLIVVNKPSIKTNFLDEETVNMSCEV 680
>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
protein 6, isoform d protein.
Length = 1196
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 130 CEAYNDIIKQHPEFEHYDYRAPKNKTNLINAEEVNLECNM 11
C A+N + K H + + P KTN ++ E VN+ C +
Sbjct: 610 CTAHNKLGKAHAQVQLIVVNKPSIKTNFLDEETVNMSCEV 649
>Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical
protein W04D2.2a protein.
Length = 332
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 179 VNISNVVHF*SYLFSHFFWEQRLSTPYRILLSH*KYLTDNFLSKFKW 319
+N++ V ++ +F+HF WE P I L+ + + + FL K W
Sbjct: 260 MNVTEVPNW-LIMFAHFTWEFIHGAPVFIYLALNRMIRERFLEKMHW 305
>Z81593-4|CAB04742.1| 334|Caenorhabditis elegans Hypothetical
protein T20B3.4 protein.
Length = 334
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 461 VQVISYVSILVHCKIQF*YTRYCIFAE 381
+ VISY+SI VHC Y +C+FA+
Sbjct: 22 LHVISYISIPVHC-----YGGFCVFAK 43
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 112 YHCMLHIIWQIPYWLSEKAWSQGQYQQ 192
Y+ MLH W W+S++A QG++ +
Sbjct: 730 YYKMLHRSWMPVRWMSKEAIEQGRFSE 756
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 112 YHCMLHIIWQIPYWLSEKAWSQGQYQQ 192
Y+ MLH W W+S++A QG++ +
Sbjct: 756 YYKMLHRSWMPVRWMSKEAIEQGRFSE 782
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 112 YHCMLHIIWQIPYWLSEKAWSQGQYQQ 192
Y+ MLH W W+S++A QG++ +
Sbjct: 730 YYKMLHRSWMPVRWMSKEAIEQGRFSE 756
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 112 YHCMLHIIWQIPYWLSEKAWSQGQYQQ 192
Y+ MLH W W+S++A QG++ +
Sbjct: 756 YYKMLHRSWMPVRWMSKEAIEQGRFSE 782
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 112 YHCMLHIIWQIPYWLSEKAWSQGQYQQ 192
Y+ MLH W W+S++A QG++ +
Sbjct: 597 YYKMLHRSWMPVRWMSKEAIEQGRFSE 623
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 112 YHCMLHIIWQIPYWLSEKAWSQGQYQQ 192
Y+ MLH W W+S++A QG++ +
Sbjct: 730 YYKMLHRSWMPVRWMSKEAIEQGRFSE 756
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 112 YHCMLHIIWQIPYWLSEKAWSQGQYQQ 192
Y+ MLH W W+S++A QG++ +
Sbjct: 756 YYKMLHRSWMPVRWMSKEAIEQGRFSE 782
>AJ002903-1|CAA05738.1| 53|Caenorhabditis elegans protein tyrosine
kinase protein.
Length = 53
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 112 YHCMLHIIWQIPYWLSEKAWSQGQYQQ 192
Y+ MLH W W+S++A QG++ +
Sbjct: 25 YYKMLHRSWMPVRWMSKEAIEQGRFSE 51
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,090,393
Number of Sequences: 27780
Number of extensions: 454225
Number of successful extensions: 1168
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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