Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_J01
         (847 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein.     32   2.3  
AY038071-1|AAK93901.1|  562|Homo sapiens aristaless-related home...    31   6.9  
AB065601-1|BAC05829.1|  984|Homo sapiens seven transmembrane hel...    31   6.9  

>AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein.
          Length = 1460

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +3

Query: 129 RYNE--RGLAPPPNPPPDEGVAGSGKTRTEYCDNVIS 233
           +YNE  + + PPP PPP E + G  K     C  + S
Sbjct: 342 QYNEGKQAVPPPPTPPPPEALGGGDKLACGACGKLFS 378


>AY038071-1|AAK93901.1|  562|Homo sapiens aristaless-related
           homeobox protein ARX protein.
          Length = 562

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
 Frame = +3

Query: 63  IISGCTPTQARCRGRACVGEHSRYNERGLAPPPNPP---PDEGVAGSGKTRTEYCDNVIS 233
           ++ G     A     A     +    RG APPP PP   P E   G+G           +
Sbjct: 96  LLQGAAAAAAAAAAAAAAAATATAGPRGEAPPPPPPTARPGERPDGAGAAAAAAAAAAAA 155

Query: 234 PDAFTFNPRQKIIITRTKHFQ 296
            D    +   ++ I+R+K ++
Sbjct: 156 WDTLKISQAPQVSISRSKSYR 176


>AB065601-1|BAC05829.1|  984|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 984

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 153 PPPNPPPDEGVAGSG-KTRTEYCDNVISP 236
           PPP PPP  G A +G + R   C  V +P
Sbjct: 496 PPPAPPPPAGAAAAGTRERRRLCAQVTAP 524


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,391,381
Number of Sequences: 237096
Number of extensions: 1895907
Number of successful extensions: 7963
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7796
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)