Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_I22
         (645 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0214 + 21616019-21616086,21616205-21616252,21616336-216164...    29   2.4  
04_04_1229 - 31906854-31907300,31907986-31908181,31908631-319087...    28   7.3  

>09_06_0214 +
           21616019-21616086,21616205-21616252,21616336-21616427,
           21616555-21616645,21617660-21617720,21617810-21617887,
           21617979-21618029,21618118-21618191,21618306-21618378,
           21618762-21618819,21618899-21618969,21619045-21619110,
           21619327-21619359,21619445-21619497,21619572-21619647,
           21619729-21619785,21619874-21619957,21620037-21620135,
           21620260-21620364,21620575-21620643,21621019-21621108
          Length = 498

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +3

Query: 558 DLXILDLYSLNKKYTCNFHLL 620
           DL ++ + SLNKKY CN  LL
Sbjct: 113 DLIVIQIESLNKKYGCNVPLL 133


>04_04_1229 -
           31906854-31907300,31907986-31908181,31908631-31908756,
           31909962-31910329,31910680-31910835,31910968-31911168,
           31911230-31911375,31911439-31911865,31912527-31912627,
           31913197-31913254
          Length = 741

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -1

Query: 297 ILKKLSQQKNVKKIGCKNN--PCNKCNLW*W 211
           IL+   ++K  KK G K N  PC +C  W W
Sbjct: 506 ILENYYKRKCEKKNGKKQNKNPCYRCRFWGW 536


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,157,953
Number of Sequences: 37544
Number of extensions: 194418
Number of successful extensions: 282
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)