Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_I22
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    28   0.29 
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    25   2.0  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    23   8.3  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 368  MLYYKVAIYTISFIIKVCITFLYINDTVVMYFCNKW 475
            +LYY   I+T+ F +++ I +L +   V  YF N W
Sbjct: 1338 ILYYMDRIFTVIFFLEMLIKWLALGFKV--YFTNAW 1371


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 366 RTLTYLINEYVIHNKYN**LPIPILKKLSQQKNVKKIGCKNN 241
           +TL  + + YV+       L +PI    S Q NV+ +GC  N
Sbjct: 174 KTLAAIFSSYVVCPF----LAVPIYLSFSIQSNVELLGCDGN 211


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 385 YFIIQHSYTNIFDK 344
           YF+  +S+TNI D+
Sbjct: 211 YFVCNYSFTNIMDR 224


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,132
Number of Sequences: 2352
Number of extensions: 10694
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)