Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_I22
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 31 0.53
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 31 0.53
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 31 0.53
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 31 0.53
Z92812-1|CAB07276.1| 334|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z74035-2|CAA98484.1| 334|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical ... 28 4.9
AC024805-9|AAK39341.2| 237|Caenorhabditis elegans Hypothetical ... 28 6.5
Z66512-9|CAA91328.3| 253|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z48638-12|CAA88573.3| 253|Caenorhabditis elegans Hypothetical p... 27 8.6
U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family ... 27 8.6
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 27 8.6
AC006730-1|AAK72090.1| 324|Caenorhabditis elegans Serpentine re... 27 8.6
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 27 8.6
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 395 TISFIIKVCITFLYINDTVVMYFCNKWYFNTYT 493
TIS I+ +C F I ++ YFC +YF+ YT
Sbjct: 69 TISKILSICTIFAVICQSI-FYFCFTFYFHPYT 100
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 395 TISFIIKVCITFLYINDTVVMYFCNKWYFNTYT 493
TIS I+ +C F I ++ YFC +YF+ YT
Sbjct: 69 TISKILSICTIFAVICQSI-FYFCFTFYFHPYT 100
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 395 TISFIIKVCITFLYINDTVVMYFCNKWYFNTYT 493
TIS I+ +C F I ++ YFC +YF+ YT
Sbjct: 69 TISKILSICTIFAVICQSI-FYFCFTFYFHPYT 100
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 395 TISFIIKVCITFLYINDTVVMYFCNKWYFNTYT 493
TIS I+ +C F I ++ YFC +YF+ YT
Sbjct: 69 TISKILSICTIFAVICQSI-FYFCFTFYFHPYT 100
>Z92812-1|CAB07276.1| 334|Caenorhabditis elegans Hypothetical
protein T03E6.1 protein.
Length = 334
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 254 PIFLTFFCCDNFFKIGIGNYQLYLLCITYSF-IKYVSVRMLYYKVAIYTISFIIKVCITF 430
P+F+ F ++ GIGN+ L C +++ I ++ + Y + + F+ K+
Sbjct: 68 PVFIVFMDSPLKYQAGIGNFVTCLYCGSFALVISLLAAQFSYRFIVVCRPEFLPKLDGFK 127
Query: 431 LYINDTVVMYFCNKWYFNTY 490
L I M+F W+ Y
Sbjct: 128 LVIIFIPCMFFFILWFELVY 147
>Z74035-2|CAA98484.1| 334|Caenorhabditis elegans Hypothetical
protein F47G9.2 protein.
Length = 334
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 254 PIFLTFFCCDNFFKIGIGNYQLYLLCITYSFIKYVSVRMLYYK 382
P+F+ F +N F GIGN L C T+ F+ V +Y+
Sbjct: 67 PMFVVFLD-NNVFSQGIGNVVACLHCGTFGFLISVFAAQFFYR 108
>AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical
protein Y32B12B.5 protein.
Length = 451
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 254 PIFLTFFCCDNFFKIGIGNYQLYLLCITYSF-IKYVSVRMLYYKVAIYTISFIIKVCITF 430
P+F+ F ++ GIGN+ L C +++ I ++ + Y +A+ + K+
Sbjct: 193 PVFIVFMDSPLKYQAGIGNFVTCLYCGSFALVISLLAAQFSYRFIAVCRPEILPKLDGFK 252
Query: 431 LYINDTVVMYFCNKWYFNTY 490
L I M+F W+ Y
Sbjct: 253 LVIIIIPCMFFFILWFELVY 272
>AC024805-9|AAK39341.2| 237|Caenorhabditis elegans Hypothetical
protein Y51H7C.10 protein.
Length = 237
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 380 KVAIYTISFIIKVCI-TFLYINDTVVMYFCNKW 475
+V +Y +I CI TF+ + TV+ + N+W
Sbjct: 148 RVPVYVAVTVIAACILTFVLLVGTVIYFLTNRW 180
>Z66512-9|CAA91328.3| 253|Caenorhabditis elegans Hypothetical
protein ZK892.5 protein.
Length = 253
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 329 CITYSFIKYVSVRMLYYKVAIYTISFIIKVCITFLYINDTVVMYFCNK 472
C T + Y+S + ++ ISF+I C+ FL I+ F K
Sbjct: 40 CTTVGWYIYLSEAYAHMADSLVHISFMITTCVMFLVISLVYFSIFTKK 87
>Z48638-12|CAA88573.3| 253|Caenorhabditis elegans Hypothetical
protein ZK892.5 protein.
Length = 253
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 329 CITYSFIKYVSVRMLYYKVAIYTISFIIKVCITFLYINDTVVMYFCNK 472
C T + Y+S + ++ ISF+I C+ FL I+ F K
Sbjct: 40 CTTVGWYIYLSEAYAHMADSLVHISFMITTCVMFLVISLVYFSIFTKK 87
>U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 27.5 bits (58), Expect = 8.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 276 QKNVKKIGCKNNPCNKCNLW 217
+KN++ C N PCN +W
Sbjct: 797 EKNIEVRSCDNGPCNAIGVW 816
>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 27.5 bits (58), Expect = 8.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 276 QKNVKKIGCKNNPCNKCNLW 217
+KN++ C N PCN +W
Sbjct: 797 EKNIEVRSCDNGPCNAIGVW 816
>AC006730-1|AAK72090.1| 324|Caenorhabditis elegans Serpentine
receptor, class i protein33 protein.
Length = 324
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 359 SVRMLYYKVAIYTISFIIKVCITFLYI 439
S+ ++YY + TISF++ + FL I
Sbjct: 8 SIWLIYYSYTVGTISFVLNFLVIFLII 34
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 27.5 bits (58), Expect = 8.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 276 QKNVKKIGCKNNPCNKCNLW 217
+KN++ C N PCN +W
Sbjct: 797 EKNIEVRSCDNGPCNAIGVW 816
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,311,665
Number of Sequences: 27780
Number of extensions: 234408
Number of successful extensions: 509
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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