Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_I15
         (416 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1199 - 9657169-9657254,9657369-9657395,9657485-9657553,965...   155   1e-38
05_05_0300 + 23932947-23933196,23934022-23934123,23934249-239343...   150   5e-37
01_06_1103 - 34543915-34543955,34544069-34544137,34544294-345443...   145   1e-35
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929...    30   0.86 
03_05_0830 + 28034179-28035492                                         29   1.5  
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893...    27   6.0  
07_03_1085 - 23851852-23853165                                         27   6.0  

>01_01_1199 -
           9657169-9657254,9657369-9657395,9657485-9657553,
           9657922-9658023,9659895-9660000,9660145-9660165
          Length = 136

 Score =  155 bits (377), Expect = 1e-38
 Identities = 70/99 (70%), Positives = 84/99 (84%)
 Frame = -3

Query: 339 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 160
           MVAAKK KK+ ++IN++L LVMKSGKY LGYK  L+TLR  KAKLVII+ N PPLRKSEI
Sbjct: 1   MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60

Query: 159 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITEP 43
           EYYA+LAK  VHH+ GNN++LGTACGKY+RVC L+I +P
Sbjct: 61  EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDP 99


>05_05_0300 +
           23932947-23933196,23934022-23934123,23934249-23934317,
           23934406-23934446
          Length = 153

 Score =  150 bits (363), Expect = 5e-37
 Identities = 66/98 (67%), Positives = 79/98 (80%)
 Frame = -3

Query: 336 VAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIE 157
           V A  QKK+ ++IN++L LVMKSGKY LGYK  LKTLR  K KL+I+A N PPLRKSEIE
Sbjct: 43  VVAMMQKKSTDNINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLIILANNCPPLRKSEIE 102

Query: 156 YYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITEP 43
           YYA+L K  VHH+ GNN++LGTACGKYYRVC L+I +P
Sbjct: 103 YYAMLGKVSVHHFHGNNVDLGTACGKYYRVCCLSIIDP 140


>01_06_1103 -
           34543915-34543955,34544069-34544137,34544294-34544395,
           34545603-34545708,34545998-34546079,34546850-34547142
          Length = 230

 Score =  145 bits (351), Expect = 1e-35
 Identities = 63/92 (68%), Positives = 75/92 (81%)
 Frame = -3

Query: 318 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 139
           KK  E IN++L LVMKSGKY LGYK  LKTLR  K KLVI+A N PPLRKSEIEYYA+L 
Sbjct: 126 KKNAEGINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLVIVANNCPPLRKSEIEYYAMLG 185

Query: 138 KTGVHHYSGNNIELGTACGKYYRVCTLAITEP 43
           K  V+H++GNN++LGTACGKYYRVC L++ +P
Sbjct: 186 KVSVYHFNGNNVDLGTACGKYYRVCCLSVVDP 217


>06_01_1127 +
           9294079-9294193,9294300-9294369,9294611-9294716,
           9295665-9295805,9296377-9296475
          Length = 176

 Score = 29.9 bits (64), Expect = 0.86
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
 Frame = -3

Query: 288 LALVMKSGKY-CL--GYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG--VH 124
           L LV ++ +  CL  G K+ +K++R+G+  L IIA N  P+    I +  +L +     +
Sbjct: 33  LKLVRRASEAKCLKRGVKEVVKSIRRGQKGLCIIAGNISPI--DVITHVPILCEEANIPY 90

Query: 123 HYSGNNIELGTA-CGKYYRVCTLAITEP 43
            Y  +  +L TA   K    C L +T+P
Sbjct: 91  VYVPSKEDLATAGTTKRPTCCVLVLTKP 118


>03_05_0830 + 28034179-28035492
          Length = 437

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 270 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 187
           +GKY  G   TLKTL  G  + +I+ +N
Sbjct: 299 TGKYVFGVDDTLKTLEMGAVETLIVWEN 326


>08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,
            8939751-8939817,8940421-8940724,8942993-8942996,
            8944539-8946449
          Length = 1387

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -3

Query: 336  VAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 181
            V++  Q   +ES+ + L  V  SG Y LG+KQ L+T  +G     I+    P
Sbjct: 1333 VSSSLQFSGLESMET-LKEVWLSGSYELGFKQQLETELKGNENEPILELEKP 1383


>07_03_1085 - 23851852-23853165
          Length = 437

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 270 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 187
           +GKY  G   TLK L  G  + +I+ +N
Sbjct: 299 TGKYVFGVDDTLKALEMGAVETLIVWEN 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,897,198
Number of Sequences: 37544
Number of extensions: 222554
Number of successful extensions: 521
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)