Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_I07
(356 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0257 + 11145558-11145876,11148181-11148347,11149114-111493... 125 1e-29
03_05_0228 - 22137771-22138016,22138109-22138306,22138852-221390... 125 1e-29
06_02_0082 + 11536799-11537554,11538210-11538334,11538507-11538687 31 0.20
01_06_1709 + 39337720-39337785,39338103-39338310,39338705-39339345 30 0.47
01_01_0652 + 4975091-4975585 29 0.81
04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903 29 1.1
09_04_0694 - 19529084-19529201,19529464-19529544,19529637-195301... 28 2.5
09_02_0328 - 7293547-7293855,7294161-7294274,7294348-7294429,729... 28 2.5
06_01_1010 + 7866158-7866661 28 2.5
10_08_0857 + 21104688-21104833,21105046-21105274 27 4.3
09_02_0227 - 6029995-6030277,6030456-6030502 27 4.3
04_03_0361 + 14912420-14912720,14912945-14913117,14913474-149137... 27 5.7
02_02_0677 + 12859101-12859413,12862450-12862817 27 5.7
02_02_0100 - 6783821-6784339,6784815-6784984,6785062-6785164,678... 27 5.7
09_04_0351 + 16904075-16904738,16906285-16906366,16906533-169066... 26 7.6
08_02_0836 + 21640467-21640552,21640581-21640665,21641052-216410... 26 7.6
08_02_0669 + 19868149-19870179 26 7.6
07_03_0439 + 18212584-18213065,18214164-18215010 26 7.6
01_06_0699 - 31313967-31315106 26 7.6
>05_03_0257 +
11145558-11145876,11148181-11148347,11149114-11149311,
11149405-11149650
Length = 309
Score = 125 bits (301), Expect = 1e-29
Identities = 61/110 (55%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
Frame = -1
Query: 338 RYLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAV 159
R +S+AEE L+SYWV +DS+YKYFE+ILVD +H AIR DP+INW+ V
Sbjct: 201 RNKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHSAIRNDPRINWLCKPV 260
Query: 158 HKHREMRGLTSAGRSSRGL-GKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 12
HKHRE+RGLTSAG+ RGL GKGH + + + SRRA W R T+ LRR R
Sbjct: 261 HKHRELRGLTSAGKKYRGLRGKGHTHHKAR-PSRRATWKRNQTVSLRRYR 309
>03_05_0228 -
22137771-22138016,22138109-22138306,22138852-22139018,
22139129-22139132
Length = 204
Score = 125 bits (301), Expect = 1e-29
Identities = 61/110 (55%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
Frame = -1
Query: 338 RYLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAV 159
R +S+AEE L+SYWV +DS+YKYFE+ILVD +H AIR DP+INW+ V
Sbjct: 96 RNKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHSAIRNDPRINWLCKPV 155
Query: 158 HKHREMRGLTSAGRSSRGL-GKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 12
HKHRE+RGLTSAG+ RGL GKGH + + + SRRA W R T+ LRR R
Sbjct: 156 HKHRELRGLTSAGKKYRGLRGKGHTHHKAR-PSRRATWKRNQTVSLRRYR 204
>06_02_0082 + 11536799-11537554,11538210-11538334,11538507-11538687
Length = 353
Score = 31.5 bits (68), Expect = 0.20
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 236 FEVILVDPSHKAIRRDPK 183
FE+ILVD +H AIR DPK
Sbjct: 299 FEIILVDVAHSAIRDDPK 316
>01_06_1709 + 39337720-39337785,39338103-39338310,39338705-39339345
Length = 304
Score = 30.3 bits (65), Expect = 0.47
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 140 RGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRR 18
+ L GR + G G + +GG RR AW RR + R
Sbjct: 136 KALVGVGRRAAGAGLQAVVPEARGGERRRAWRRRGLVATLR 176
>01_01_0652 + 4975091-4975585
Length = 164
Score = 29.5 bits (63), Expect = 0.81
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 128 SAGRSSRGLGKGHRYSQTKGGSRRAAW 48
+AG+ GKG R + +GG RR W
Sbjct: 37 AAGKRREAAGKGGRQREARGGGRRMRW 63
>04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903
Length = 405
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 188 PKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWL 45
P+++ VH+ RG ++AG R G S G SRR AWL
Sbjct: 264 PRVSGTKRPVHRGLGPRGWSTAGPRDRRSGSASGRSDGAGSSRR-AWL 310
>09_04_0694 -
19529084-19529201,19529464-19529544,19529637-19530136,
19530444-19530540,19530633-19530775,19531187-19531528,
19531810-19532031,19532292-19532330,19532386-19532601,
19533101-19533196,19533416-19533481,19533777-19533821,
19533903-19533965,19534274-19534344,19534599-19534699,
19534896-19534972,19535856-19535900
Length = 773
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -1
Query: 239 YFEVILVDPSHKAIRR-DPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGS 63
Y + LV+ + R+ D + W N ++ G+ + GRSS + + S +KG +
Sbjct: 202 YEQAALVERMQEFKRQIDRESRWSPNGINDSPNGDGIQAIGRSSHKMIEAVMQSASKGKA 261
Query: 62 RRAAW 48
+AW
Sbjct: 262 HISAW 266
>09_02_0328 -
7293547-7293855,7294161-7294274,7294348-7294429,
7295318-7295401,7296199-7296399,7296516-7296853,
7296968-7297084
Length = 414
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 137 GLTSAGRSSRGLGKGHRYSQTKGGSRRAA 51
G++ +G G G+G KGGSR AA
Sbjct: 174 GVSGSGAGGGGRGRGRGSDDAKGGSRAAA 202
>06_01_1010 + 7866158-7866661
Length = 167
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 149 REMRGLTSAGRSSRGLGKGHRYSQTKGGSRR 57
R+ G+ G + G GKG R+ GG RR
Sbjct: 57 RKEAGMPGGGARAPGSGKGRRWRPEHGGKRR 87
>10_08_0857 + 21104688-21104833,21105046-21105274
Length = 124
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 128 SAGRSSRGLGKGHRYSQTKGGSRRAAWL 45
++GRS G G G R +G SR AW+
Sbjct: 9 ASGRSIGGAGPGRRPHLRRGESREFAWI 36
>09_02_0227 - 6029995-6030277,6030456-6030502
Length = 109
Score = 27.1 bits (57), Expect = 4.3
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 149 REMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLR 42
R G+ GRS GLG R GGS A W R
Sbjct: 39 RWRHGVAVLGRSGVGLGVALRQRGAGGGSATAVWGR 74
>04_03_0361 +
14912420-14912720,14912945-14913117,14913474-14913779,
14913862-14913936,14913976-14914191,14914741-14915527,
14915587-14915681
Length = 650
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 128 SAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 33
S GR RG G+G R T+ + RA+W NT
Sbjct: 141 SQGRG-RGRGRGARCRLTEDFNDRASWTNENT 171
>02_02_0677 + 12859101-12859413,12862450-12862817
Length = 226
Score = 26.6 bits (56), Expect = 5.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 245 YKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRS 114
Y F +++D H+ IR + V AV KH +M GRS
Sbjct: 106 YSLFLALVIDRLHQYIRELRGLKKNVEAVTKHNKMLEEAKHGRS 149
>02_02_0100 -
6783821-6784339,6784815-6784984,6785062-6785164,
6785291-6785454,6786781-6786821,6786933-6787129
Length = 397
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 131 TSAGRSSRGLGKGHRYSQTKGGS 63
+S GRSS G G G+R S GG+
Sbjct: 241 SSNGRSSHGSGGGYRSSYRSGGA 263
>09_04_0351 +
16904075-16904738,16906285-16906366,16906533-16906697,
16906811-16906929,16906930-16907156
Length = 418
Score = 26.2 bits (55), Expect = 7.6
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 27 LKSVASEPSCPA*ASLCLRVSMSLAETSGA-ATSRSQTTHLTMLMYSIHDPVDLRIATNG 203
L+S +S +CPA S L + LAE + + + +++ DP D RI G
Sbjct: 27 LESCSSSTACPALLSYTLYADLKLAELAALFSADPLAILAANSIDFAVPDPAD-RILPAG 85
Query: 204 LV*RV 218
L RV
Sbjct: 86 LPLRV 90
>08_02_0836 +
21640467-21640552,21640581-21640665,21641052-21641084,
21642138-21642293
Length = 119
Score = 26.2 bits (55), Expect = 7.6
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = -1
Query: 239 YFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAG 120
+ + + + H ++ +P + WIV V H++ L + G
Sbjct: 63 FVKPVKANAEHMLLQPEPCLRWIVQIVEPHKQQAQLLTHG 102
>08_02_0669 + 19868149-19870179
Length = 676
Score = 26.2 bits (55), Expect = 7.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 185 KINWIVNAVHKHREMR 138
K W+VN +H+H E R
Sbjct: 645 KARWLVNEIHRHYEQR 660
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 26.2 bits (55), Expect = 7.6
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = -1
Query: 158 HKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSR 60
H HR M G A RSS GL G R +KG R
Sbjct: 147 HHHRWMTGWRGARRSSSGL-PGARPQWSKGALR 178
>01_06_0699 - 31313967-31315106
Length = 379
Score = 26.2 bits (55), Expect = 7.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = -1
Query: 140 RGLTSAGRSSRGLGKGHR-YSQTKG--GSRRAAW 48
R +TSAGR + G GH S T G G RA W
Sbjct: 76 RAVTSAGRVNEARGGGHALLSPTVGSIGGARAIW 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,033,313
Number of Sequences: 37544
Number of extensions: 166647
Number of successful extensions: 557
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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