BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_I05
(531 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069179-1|AAL39324.1| 546|Drosophila melanogaster GH22722p pro... 29 3.9
AE014296-1236|AAF50577.2| 546|Drosophila melanogaster CG8596-PA... 29 3.9
AY051888-1|AAK93312.1| 503|Drosophila melanogaster LD37690p pro... 29 5.2
AE014297-4320|AAF56856.1| 503|Drosophila melanogaster CG11877-P... 29 5.2
D83705-1|BAA12071.1| 183|Drosophila melanogaster galactose spec... 28 9.1
>AY069179-1|AAL39324.1| 546|Drosophila melanogaster GH22722p
protein.
Length = 546
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 227 IFFPALSTTVEMAAPFMLGPKPAFEAMSWMFDMPCI-KLAGEKLLAFIGNMFGSLGT 394
I +P T ++ +LGP+P M WM C+ ++ G F+G+++ LGT
Sbjct: 408 IGYPIGVTLIQTIFSKVLGPRPQGVWMGWMTGSGCLSRVLGP---VFVGSIYTRLGT 461
>AE014296-1236|AAF50577.2| 546|Drosophila melanogaster CG8596-PA
protein.
Length = 546
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 227 IFFPALSTTVEMAAPFMLGPKPAFEAMSWMFDMPCI-KLAGEKLLAFIGNMFGSLGT 394
I +P T ++ +LGP+P M WM C+ ++ G F+G+++ LGT
Sbjct: 408 IGYPIGVTLIQTIFSKVLGPRPQGVWMGWMTGSGCLSRVLGP---VFVGSIYTRLGT 461
>AY051888-1|AAK93312.1| 503|Drosophila melanogaster LD37690p
protein.
Length = 503
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 306 CPGCLTCLALSLPAKNC*RLSEICSGR*ERPHLPTRTRQ 422
CP C +C A +NC R I + ERP T +Q
Sbjct: 70 CPLCHSCSASRFHCRNCVRNGNITHSQAERPESLTEKQQ 108
>AE014297-4320|AAF56856.1| 503|Drosophila melanogaster CG11877-PA
protein.
Length = 503
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 306 CPGCLTCLALSLPAKNC*RLSEICSGR*ERPHLPTRTRQ 422
CP C +C A +NC R I + ERP T +Q
Sbjct: 70 CPLCHSCSASRFHCRNCVRNGNITHSQAERPESLTEKQQ 108
>D83705-1|BAA12071.1| 183|Drosophila melanogaster galactose
specific C-type lectin protein.
Length = 183
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 391 NGRTFQPVHGSQNQKNNCNLR-HCISLFAYVQK*SRVFRAN 510
NG+ + ++NQ +N + HCI L Y+ K SR F N
Sbjct: 114 NGQRISSLRWARNQPDNAGQKEHCIHL-GYIYKDSRKFELN 153
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,879,236
Number of Sequences: 53049
Number of extensions: 423950
Number of successful extensions: 1054
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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