Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_I04
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 153 1e-37
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 153 1e-37
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 153 1e-37
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 153 1e-37
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 148 4e-36
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 146 1e-35
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 145 3e-35
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 145 3e-35
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 33 0.18
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 31 0.72
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41556-7|AAP68954.1| 145|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41556-5|AAK39193.1| 212|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 28 6.8
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 28 6.8
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 28 6.8
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 28 6.8
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 153 bits (371), Expect = 1e-37
Identities = 70/116 (60%), Positives = 87/116 (75%), Gaps = 3/116 (2%)
Frame = -2
Query: 653 GKHGFHVHEFGDNTNGCTSXGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSI 474
G HGFHVH++GD+TNGC S G HFNP + HGGP S +RHVGDLGN+EA D GV K+ +
Sbjct: 41 GLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKIKL 99
Query: 473 QDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 315
D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 100 TDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 153 bits (371), Expect = 1e-37
Identities = 70/116 (60%), Positives = 87/116 (75%), Gaps = 3/116 (2%)
Frame = -2
Query: 653 GKHGFHVHEFGDNTNGCTSXGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSI 474
G HGFHVH++GD+TNGC S G HFNP + HGGP S +RHVGDLGN+EA D GV K+ +
Sbjct: 41 GLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKIKL 99
Query: 473 QDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 315
D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 100 TDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 153 bits (371), Expect = 1e-37
Identities = 70/116 (60%), Positives = 87/116 (75%), Gaps = 3/116 (2%)
Frame = -2
Query: 653 GKHGFHVHEFGDNTNGCTSXGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSI 474
G HGFHVH++GD+TNGC S G HFNP + HGGP S +RHVGDLGN+EA D GV K+ +
Sbjct: 41 GLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKIKL 99
Query: 473 QDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 315
D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 100 TDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 153 bits (371), Expect = 1e-37
Identities = 70/116 (60%), Positives = 87/116 (75%), Gaps = 3/116 (2%)
Frame = -2
Query: 653 GKHGFHVHEFGDNTNGCTSXGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSI 474
G HGFHVH++GD+TNGC S G HFNP + HGGP S +RHVGDLGN+EA D GV K+ +
Sbjct: 63 GLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKIKL 121
Query: 473 QDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 315
D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 122 TDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 177
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 148 bits (358), Expect = 4e-36
Identities = 70/116 (60%), Positives = 83/116 (71%), Gaps = 3/116 (2%)
Frame = -2
Query: 653 GKHGFHVHEFGDNTNGCTSXGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSI 474
G HGFH+H++GD+T+GCTS G HFNP K +HGG S VRHVGDLGN+EA D GV K+
Sbjct: 61 GLHGFHIHQYGDSTDGCTSAGPHFNPCKMNHGGRDSVVRHVGDLGNVEAGAD-GVAKIKF 119
Query: 473 QDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 315
D +SL G N++IGR++VVH D DDLG G E S TGNAG R ACGVI LA
Sbjct: 120 SDKVVSLFGANTVIGRSMVVHVDRDDLGQGIDDKAEESLKTGNAGARAACGVIALA 175
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 146 bits (354), Expect = 1e-35
Identities = 66/114 (57%), Positives = 80/114 (70%)
Frame = -2
Query: 653 GKHGFHVHEFGDNTNGCTSXGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSI 474
GKHGFH+HE GD NGC S G H+NP K HG P + RH+GDLGNIE+ SG T +S+
Sbjct: 65 GKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIES-PASGDTLISV 123
Query: 473 QDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIGLAK 312
DS SL G SIIGR++V+H DDLG G + SKTTGNAG R+ACG IG+ +
Sbjct: 124 SDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIGIVE 177
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 145 bits (351), Expect = 3e-35
Identities = 66/111 (59%), Positives = 78/111 (70%)
Frame = -2
Query: 653 GKHGFHVHEFGDNTNGCTSXGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSI 474
GKHGFH+HE GD NGC S G H+NP K HG P + RH+GDLGNIE+ SG T +S+
Sbjct: 65 GKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIES-PASGDTLISV 123
Query: 473 QDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIG 321
DS SL G SIIGR++V+H DDLG G + SKTTGNAG R+ACG IG
Sbjct: 124 SDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIG 174
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 145 bits (351), Expect = 3e-35
Identities = 66/111 (59%), Positives = 78/111 (70%)
Frame = -2
Query: 653 GKHGFHVHEFGDNTNGCTSXGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSI 474
GKHGFH+HE GD NGC S G H+NP K HG P + RH+GDLGNIE+ SG T +S+
Sbjct: 65 GKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIES-PASGDTLISV 123
Query: 473 QDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIG 321
DS SL G SIIGR++V+H DDLG G + SKTTGNAG R+ACG IG
Sbjct: 124 SDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIG 174
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 33.1 bits (72), Expect = 0.18
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 653 GKHGFHVHEFGDNTNGCTSXGAHFN 579
G+H +H+FGD++ GC+ GA F+
Sbjct: 921 GRHAVVLHQFGDSSEGCSRVGAPFS 945
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 33.1 bits (72), Expect = 0.18
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 653 GKHGFHVHEFGDNTNGCTSXGAHFN 579
G+H +H+FGD++ GC+ GA F+
Sbjct: 712 GRHAVVLHQFGDSSEGCSRVGAPFS 736
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 31.1 bits (67), Expect = 0.72
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 332 HKQYGHQHYQWSYLAHGHPVPSHQGQHGQ 418
H +G H HGH P+H G HG+
Sbjct: 580 HGSHGVHHGHHESHGHGHHAPAHHGHHGE 608
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 332 HKQYGHQHYQWSYLAHGHPVPSHQGQHGQ 418
H H H++ S+ HGH P+H G HG+
Sbjct: 434 HAPAHHGHHE-SH-GHGHHSPAHHGHHGE 460
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 233 FCLNFTYINKK-PSVFDGNISPSD 165
F NFT I K PS+FD N+SP D
Sbjct: 1713 FNQNFTTIQPKFPSLFDCNLSPDD 1736
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 233 FCLNFTYINKK-PSVFDGNISPSD 165
F NFT I K PS+FD N+SP D
Sbjct: 1713 FNQNFTTIQPKFPSLFDCNLSPDD 1736
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 422 LVVHADPDDLGLGGHELSKTTGNAGGR 342
L+ H P+DL + ELSK G+ GR
Sbjct: 484 LITHVKPEDLDVLASELSKMGGHHNGR 510
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 422 LVVHADPDDLGLGGHELSKTTGNAGGR 342
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 422 LVVHADPDDLGLGGHELSKTTGNAGGR 342
L+ H P+DL + ELSK G+ GR
Sbjct: 494 LITHVKPEDLDVLASELSKMGGHHNGR 520
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 422 LVVHADPDDLGLGGHELSKTTGNAGGR 342
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
>U41556-7|AAP68954.1| 145|Caenorhabditis elegans Hypothetical
protein C25B8.4c protein.
Length = 145
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 379 MS*VRPLVMLVAVLLVESLAWPRFKYIHFSYVGLGTTIFSD 257
MS + LV+LVA + S + + K ++SY GT F+D
Sbjct: 1 MSRIFKLVLLVAAVGFVSTRFAQVKLFNWSYKDFGTNAFTD 41
>U41556-5|AAK39193.1| 212|Caenorhabditis elegans Hypothetical
protein C25B8.4a protein.
Length = 212
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 379 MS*VRPLVMLVAVLLVESLAWPRFKYIHFSYVGLGTTIFSD 257
MS + LV+LVA + S + + K ++SY GT F+D
Sbjct: 1 MSRIFKLVLLVAAVGFVSTRFAQVKLFNWSYKDFGTNAFTD 41
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 233 FCLNFTYINKK-PSVFDGNISPSD 165
F NFT I K PS+FD N+SP D
Sbjct: 1713 FNQNFTTIQPKFPSLFDCNLSPDD 1736
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 422 LVVHADPDDLGLGGHELSKTTGNAGGR 342
L+ H P+DL + ELSK G+ GR
Sbjct: 131 LITHVKPEDLDVLASELSKMGGHHNGR 157
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 422 LVVHADPDDLGLGGHELSKTTGNAGGR 342
L+ H P+DL + ELSK G+ GR
Sbjct: 204 LITHVKPEDLDVLASELSKMGGHHNGR 230
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 422 LVVHADPDDLGLGGHELSKTTGNAGGR 342
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,817,962
Number of Sequences: 27780
Number of extensions: 299796
Number of successful extensions: 916
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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