Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_I02
         (683 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0114 + 8539808-8539828,8540327-8541748                           29   4.5  
09_04_0391 + 17248698-17248790,17248913-17249851,17249942-17250223     28   6.0  
01_05_0362 - 21388520-21389827                                         28   6.0  
09_04_0390 + 17241546-17241638,17241715-17242653,17242753-17243037     28   7.9  
08_02_0986 + 23328056-23328145,23328289-23329227,23329313-233295...    28   7.9  
04_01_0453 + 5869627-5870232,5870383-5870897,5870964-5871600           28   7.9  

>05_03_0114 + 8539808-8539828,8540327-8541748
          Length = 480

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 410 IHKHCSLWLQKQNVSLRYNHHPSPFSVLQYIV 315
           + ++C  W       LR N+ PSP+S +   V
Sbjct: 428 VTRYCGTWWHSHMAGLRRNYFPSPWSAISVAV 459


>09_04_0391 + 17248698-17248790,17248913-17249851,17249942-17250223
          Length = 437

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = -2

Query: 610 YNFKLYMIWYIISFAQDFHWVPPLVRVASPRLFNPGLYSPVTVRAIGSGADVSALLA 440
           YNF    +  I +      W+PP     +P+ + PG    +     G+GA++ +L+A
Sbjct: 45  YNFLHSHVDDIAATGVTHVWLPPPSHSVAPQGYMPGRLYDLDASKYGTGAELRSLIA 101


>01_05_0362 - 21388520-21389827
          Length = 435

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 7/31 (22%), Positives = 20/31 (64%)
 Frame = -1

Query: 410 IHKHCSLWLQKQNVSLRYNHHPSPFSVLQYI 318
           + ++C  W +++  +LR ++  SP+S + ++
Sbjct: 382 VDRYCGTWWRRKTAALRRDYFASPWSAISFV 412


>09_04_0390 + 17241546-17241638,17241715-17242653,17242753-17243037
          Length = 438

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -2

Query: 553 WVPPLVRVASPRLFNPGLYSPVTVRAIGSGADVSALLA 440
           W+PP     +P+ + PG    +     G+GA++ +L+A
Sbjct: 64  WLPPPSHSVAPQGYMPGRLYDLDASKYGTGAELRSLIA 101


>08_02_0986 +
           23328056-23328145,23328289-23329227,23329313-23329570,
           23330384-23330692
          Length = 531

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -2

Query: 610 YNFKLYMIWYIISFAQDFHWVPPLVRVASPRLFNPGLYSPVTVRAIGSGADVSALL 443
           YNF    +  I S      W+PP     SP+ + PG    +     G+ A++ +L+
Sbjct: 44  YNFLHEKVEEIASTGATHVWLPPPSHSVSPQGYMPGRLYDLDASKYGTEAELKSLI 99


>04_01_0453 + 5869627-5870232,5870383-5870897,5870964-5871600
          Length = 585

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 275 KTRCIIPGKSGSPHCGRCTTSGH 207
           K++  I G SG P+C RC T GH
Sbjct: 261 KSKVDIKG-SGKPYCFRCLTKGH 282


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,447,480
Number of Sequences: 37544
Number of extensions: 378340
Number of successful extensions: 783
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)